Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609869

Identifier: 86609869

GI number: 86609869

Start: 2530394

End: 2530924

Strand: Direct

Name: 86609869

Synonym: CYB_2434

Alternate gene names: NA

Gene position: 2530394-2530924 (Clockwise)

Preceding gene: 86609865

Following gene: 86609871

Centisome position: 83.05

GC content: 60.64

Gene sequence:

>531_bases
ATGTCTGTTGCTTGGCTGGCTTCGGTTCTGGCGAGGCGGTCTTGGCTGAGCCGTTTCCTGCGGGGGATGGTGCTTTGCGG
GCTGATACTCTGCCTGGGGGTTACTCCGCTGGGATCCCCGGCCCACGCCGAAGACTACACCAAACGAGATCTACAGGGGG
TGAGCTTTGCAGGGCAAGACCTGAGCGGCTGGAAGTTTCTCAAGGCCAACCTGCGCCAAAGCGATCTCAGCCATGTGAAG
GCGGCAGGGGCGAACCTGTTCGGGGCCAATCTCAGCAAAGCCAACTTGCGCGGAGCCGACTTGCGCGGGGCCACTTTGGA
CATGGCCAACCTACAGGGTGCGGATCTGCGAGAAGCGCAACTGCAGGACAGCATGATGTGGCTGGCCCGAGTCGAAGGGA
TCCAAATTGATGGGGCGGATTTCACCAATGCGTTGATACGGCAAGACGCCCTCTCCATCCTTTGCGAACGGGCCACCGGC
GTTAACCCTGTAACCGGTCGGGCCACCCGCGACACTCTTGAATGTGACTGA

Upstream 100 bases:

>100_bases
CTTTAAGATAGCCCAACCTGCCGGCGGGATCCCTATCCGGTAAGATAAAACCAGAAGCAATTCCCAAGCCATGGAGGTTT
CCTTGAGGGAGGGATCCACG

Downstream 100 bases:

>100_bases
TCCTCACCCCCGGCTCTTCTCCCAGAGGGAGAGGGGAGATAGGCAGCAGAACCCATCGCCTCACTGCCCTCTGGAATCCG
GATTTTAGGAGCTGGGAGCG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSVAWLASVLARRSWLSRFLRGMVLCGLILCLGVTPLGSPAHAEDYTKRDLQGVSFAGQDLSGWKFLKANLRQSDLSHVK
AAGANLFGANLSKANLRGADLRGATLDMANLQGADLREAQLQDSMMWLARVEGIQIDGADFTNALIRQDALSILCERATG
VNPVTGRATRDTLECD

Sequences:

>Translated_176_residues
MSVAWLASVLARRSWLSRFLRGMVLCGLILCLGVTPLGSPAHAEDYTKRDLQGVSFAGQDLSGWKFLKANLRQSDLSHVK
AAGANLFGANLSKANLRGADLRGATLDMANLQGADLREAQLQDSMMWLARVEGIQIDGADFTNALIRQDALSILCERATG
VNPVTGRATRDTLECD
>Mature_175_residues
SVAWLASVLARRSWLSRFLRGMVLCGLILCLGVTPLGSPAHAEDYTKRDLQGVSFAGQDLSGWKFLKANLRQSDLSHVKA
AGANLFGANLSKANLRGADLRGATLDMANLQGADLREAQLQDSMMWLARVEGIQIDGADFTNALIRQDALSILCERATGV
NPVTGRATRDTLECD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19004; Mature: 18873

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAWLASVLARRSWLSRFLRGMVLCGLILCLGVTPLGSPAHAEDYTKRDLQGVSFAGQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCC
LSGWKFLKANLRQSDLSHVKAAGANLFGANLSKANLRGADLRGATLDMANLQGADLREAQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHH
LQDSMMWLARVEGIQIDGADFTNALIRQDALSILCERATGVNPVTGRATRDTLECD
HHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVAWLASVLARRSWLSRFLRGMVLCGLILCLGVTPLGSPAHAEDYTKRDLQGVSFAGQD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCC
LSGWKFLKANLRQSDLSHVKAAGANLFGANLSKANLRGADLRGATLDMANLQGADLREAQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHH
LQDSMMWLARVEGIQIDGADFTNALIRQDALSILCERATGVNPVTGRATRDTLECD
HHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA