| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is thiS
Identifier: 86609832
GI number: 86609832
Start: 2495292
End: 2495489
Strand: Direct
Name: thiS
Synonym: CYB_2394
Alternate gene names: NA
Gene position: 2495292-2495489 (Clockwise)
Preceding gene: 86609831
Following gene: 86609833
Centisome position: 81.9
GC content: 59.09
Gene sequence:
>198_bases ATGCGTGTCTTGATCAACCAAAAGCCTTACGATTTGCCGGAAGGCACCACTTTGGCCGAGGCAGTGGCTCAGGTGGGGGC CAGCGGCCCTTTTGCGGTAGCGGTTAATCTGAAGTTTGTGCCGCGTGCCCAATACGAGCAAACCCGTCTGCAAGAAGGCG ACCAGGTGGAGATCGTCACTCCGGTTGCCGGCGGCTAG
Upstream 100 bases:
>100_bases TTTTGGAGTACCTCCACCACGGCAGTTGCCGCTTGGCGCAGCAGCTTGGGATCCCCTTTCAGGTGCAGGCTGCCCCTCTT GCCGGTGAGTCCCTGTCGCC
Downstream 100 bases:
>100_bases CGCTCAAGTCCGCTTTTCTATCTGCCTCAGCCATGTCCACCCTTCTCCATTGCTCTCCCTCAACTCTGGCCGATGAGGAT CCTTTGGTTCTCTACGGCCA
Product: thiamine biosynthesis protein ThiS
Products: NA
Alternate protein names: Sulfur Carrier Protein ThiS; ThiS Protein; Thiamine Biosynthesis Protein This
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MRVLINQKPYDLPEGTTLAEAVAQVGASGPFAVAVNLKFVPRAQYEQTRLQEGDQVEIVTPVAGG
Sequences:
>Translated_65_residues MRVLINQKPYDLPEGTTLAEAVAQVGASGPFAVAVNLKFVPRAQYEQTRLQEGDQVEIVTPVAGG >Mature_65_residues MRVLINQKPYDLPEGTTLAEAVAQVGASGPFAVAVNLKFVPRAQYEQTRLQEGDQVEIVTPVAGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6940; Mature: 6940
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLINQKPYDLPEGTTLAEAVAQVGASGPFAVAVNLKFVPRAQYEQTRLQEGDQVEIVT CEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHCCCCCEEEEEE PVAGG CCCCC >Mature Secondary Structure MRVLINQKPYDLPEGTTLAEAVAQVGASGPFAVAVNLKFVPRAQYEQTRLQEGDQVEIVT CEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHCCCCCEEEEEE PVAGG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA