The gene/protein map for CP001642 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609829

Identifier: 86609829

GI number: 86609829

Start: 2492543

End: 2493619

Strand: Direct

Name: 86609829

Synonym: CYB_2391

Alternate gene names: NA

Gene position: 2492543-2493619 (Clockwise)

Preceding gene: 86609824

Following gene: 86609831

Centisome position: 81.81

GC content: 58.68

Gene sequence:

>1077_bases
ATGGCTTCGTCTCAACCCTCTGACTCGAACACCAAGGCTCTGAGCCGCCGTCAGCTTCTCAAAGTGGGGGCCGCAGCCCT
TGGGGGCGGTCTGTTGGCGGCAGGGGGTGCCCAAGCTCAGCGCAAACCCTCTCCCACCCTGATCGTGGCTCAGGGATCCG
GCCTGGATCGCGTTTCCTATGCTACCAACTGGTATGCTCAGGCGGAACATGGGGGCTTCTATCAGGCGGTGGCGACCGGC
ATCTACCGCGAGCATGGCCTGGATGTGACCATCAAGATGGGTGGCCCTGGCATCAACATCACCCAAGTTTTGGCCGGTGG
AGCTGCCGAGTTTGCCATGGGGGGAAGCACAGGGGTGATCAATGCTGTGCGAGAAGGGATCCCCTTGGTGTGCGTGGCGG
CCATTTTTCAAAAAGACCCGCAGATCATCATGACCCACCCCGGCACCCAGCGCTTTGAAGAGCTCAAGGGCCGGCCCATT
TTCGTCTCGAAAGGGGGGCTTGCCACCTACTGGCCCTACCTAAAGGCCCGCTTTGGCTTCACCGACGATCAGGTTCGTCC
CTACAACTTCAACCCCGGCCCCTTTTTGGCGGATCCCAGCTCAGCTCAGCAAGGCTATCTGACATCCGAGCCTTTTGCCA
TCCAACGGGAAGGGGGATTTGAGCCGGTGGTCTTCCTCCTGGCGGATTTGGGCTACAAACCCTATGCCACCACCATCGAA
ACCCGTCGCCAACTGGTGGAAACCAAGCCCGACTTGGTGGAGCGATTCGTGGATGCCTCTATCAAAGGCTGGTACAGCTT
CTTGGAGGATCCCCGTCCGGCCTATCGCTTGATCAAGCAGGACAACCCGGAGATGACCGATGCCCAGTTGGCCTACAGCT
TCGAGAAATTGCAGGAGTACGGCATCATCTTGTCCGGCGATGCGTTGGAAAAAGGCATTGGCGCCATGACCGACAAACGC
TGGCAAGACTTCTTCGACAGCATGACGGTGGCCGGCGTATTTGAGCCAACCATCAACTACCGGGCTGCCTATACGCTGGA
CTTCGTCAATAAAGGCACTGCCTACTACACTGCCTGA

Upstream 100 bases:

>100_bases
ACAAGTAGGTTTACAACCGTATCCGTAGCCCCTCAATAGGCTGTACCTGCATCTTTGGCCCCCTCACACCTTGCAAGGAT
TAGCTTAGGGAGAATGGATT

Downstream 100 bases:

>100_bases
CGGACTTCCACCCTTGGCGCTTCTCAGCCCAAGGGATCCCCCCTCGCCCCCAGCCCCTCTTCCACCAAGGGAGAGGGGAA
CTATAGTCATTTCAAACTAG

Product: secreted protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Histidine Kinase; Diguanylate Cyclase; NMT1/THI5 Like Family; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; GGDEF Domain-Containing Protein; Permease Protein Of ABC Transporter; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; ABC Transporter Periplasmic; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; ABC Transporter Periplasmic Components; NMT1/THI5-Like Protein; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; Diguanylate Cyclase With PAS/PAC Sensor; ABC Transporter Permease; PAS/GGDEF Domain-Containing Protein; Signal Transduction Response Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Periplasmic-Component Of ABC Transporter; PasGgdef; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; Pyrimidine Biosynthesis; PAS/PAC Sensor-Containg Diguanylate Cyclase; NMT1/THI5-Ike Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; PAS/PAC Sensor-Containing Diguanylate Cyclase; Lipoprotein; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MASSQPSDSNTKALSRRQLLKVGAAALGGGLLAAGGAQAQRKPSPTLIVAQGSGLDRVSYATNWYAQAEHGGFYQAVATG
IYREHGLDVTIKMGGPGINITQVLAGGAAEFAMGGSTGVINAVREGIPLVCVAAIFQKDPQIIMTHPGTQRFEELKGRPI
FVSKGGLATYWPYLKARFGFTDDQVRPYNFNPGPFLADPSSAQQGYLTSEPFAIQREGGFEPVVFLLADLGYKPYATTIE
TRRQLVETKPDLVERFVDASIKGWYSFLEDPRPAYRLIKQDNPEMTDAQLAYSFEKLQEYGIILSGDALEKGIGAMTDKR
WQDFFDSMTVAGVFEPTINYRAAYTLDFVNKGTAYYTA

Sequences:

>Translated_358_residues
MASSQPSDSNTKALSRRQLLKVGAAALGGGLLAAGGAQAQRKPSPTLIVAQGSGLDRVSYATNWYAQAEHGGFYQAVATG
IYREHGLDVTIKMGGPGINITQVLAGGAAEFAMGGSTGVINAVREGIPLVCVAAIFQKDPQIIMTHPGTQRFEELKGRPI
FVSKGGLATYWPYLKARFGFTDDQVRPYNFNPGPFLADPSSAQQGYLTSEPFAIQREGGFEPVVFLLADLGYKPYATTIE
TRRQLVETKPDLVERFVDASIKGWYSFLEDPRPAYRLIKQDNPEMTDAQLAYSFEKLQEYGIILSGDALEKGIGAMTDKR
WQDFFDSMTVAGVFEPTINYRAAYTLDFVNKGTAYYTA
>Mature_357_residues
ASSQPSDSNTKALSRRQLLKVGAAALGGGLLAAGGAQAQRKPSPTLIVAQGSGLDRVSYATNWYAQAEHGGFYQAVATGI
YREHGLDVTIKMGGPGINITQVLAGGAAEFAMGGSTGVINAVREGIPLVCVAAIFQKDPQIIMTHPGTQRFEELKGRPIF
VSKGGLATYWPYLKARFGFTDDQVRPYNFNPGPFLADPSSAQQGYLTSEPFAIQREGGFEPVVFLLADLGYKPYATTIET
RRQLVETKPDLVERFVDASIKGWYSFLEDPRPAYRLIKQDNPEMTDAQLAYSFEKLQEYGIILSGDALEKGIGAMTDKRW
QDFFDSMTVAGVFEPTINYRAAYTLDFVNKGTAYYTA

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39022; Mature: 38890

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSQPSDSNTKALSRRQLLKVGAAALGGGLLAAGGAQAQRKPSPTLIVAQGSGLDRVSY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHH
ATNWYAQAEHGGFYQAVATGIYREHGLDVTIKMGGPGINITQVLAGGAAEFAMGGSTGVI
HHCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHCCCCCHHH
NAVREGIPLVCVAAIFQKDPQIIMTHPGTQRFEELKGRPIFVSKGGLATYWPYLKARFGF
HHHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCC
TDDQVRPYNFNPGPFLADPSSAQQGYLTSEPFAIQREGGFEPVVFLLADLGYKPYATTIE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHH
TRRQLVETKPDLVERFVDASIKGWYSFLEDPRPAYRLIKQDNPEMTDAQLAYSFEKLQEY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GIILSGDALEKGIGAMTDKRWQDFFDSMTVAGVFEPTINYRAAYTLDFVNKGTAYYTA
CCEEECCHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCEEECC
>Mature Secondary Structure 
ASSQPSDSNTKALSRRQLLKVGAAALGGGLLAAGGAQAQRKPSPTLIVAQGSGLDRVSY
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHH
ATNWYAQAEHGGFYQAVATGIYREHGLDVTIKMGGPGINITQVLAGGAAEFAMGGSTGVI
HHCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHCCCCCHHH
NAVREGIPLVCVAAIFQKDPQIIMTHPGTQRFEELKGRPIFVSKGGLATYWPYLKARFGF
HHHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCC
TDDQVRPYNFNPGPFLADPSSAQQGYLTSEPFAIQREGGFEPVVFLLADLGYKPYATTIE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHH
TRRQLVETKPDLVERFVDASIKGWYSFLEDPRPAYRLIKQDNPEMTDAQLAYSFEKLQEY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GIILSGDALEKGIGAMTDKRWQDFFDSMTVAGVFEPTINYRAAYTLDFVNKGTAYYTA
CCEEECCHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA