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The map label for this gene is yidS [C]

Identifier: 86609767

GI number: 86609767

Start: 2434458

End: 2435588

Strand: Direct

Name: yidS [C]

Synonym: CYB_2328

Alternate gene names: 86609767

Gene position: 2434458-2435588 (Clockwise)

Preceding gene: 86609763

Following gene: 86609771

Centisome position: 79.91

GC content: 60.57

Gene sequence:

>1131_bases
ATGCCGCAACTCTACGACTGTGTCATCGTCGGCGCCGGCCCTGCTGGAGGATCTGCCGCCTACCATCTGGCCAAGCGGGG
ACGCTCGGTGCTGGTTCTGGAAAAGGATCCCTTGCCCCGCTACAAACCCTGTGGGGGCGGCGTTTCTCCTATGGTGGCGG
CTTGGTTTGACTTCGACTTTGGCCCCGCCATTTCCCTCAAGATCCGGCAAATCCGCTACACCTGGCGCGGCGGCGATCCG
GTGGTGGTCGATTTGGATTTGAAAGAGCCCGTTTGGATGGTGCGGCGGGATGTTTTCGACCACTACCTGATTCAGCAAGC
GCAAAAGCAAGGGGCAGCGCTCCAGGCAGAATGCCCTGTCTCCGGCCTTGAGTGGCAAAGCGACCGCTGGCAAGTGATGA
CAACCGCCGGCCCGGTCTGGGGTCGGTACGTGATCGGGGCCGATGGGGCAAAAGGCTCAATGGCCAAGTGGCTGGGCTTT
CAGGAACGCCGCCGTCGCTTGGCTGCCGCCTTGGAAGCAGAAGTGCCTCTCCTGCAGCCGCAAACTGCAGCCGCCCATTT
TGACTTCGGCGCCGTCAGCAATGGCTACATTTGGAACTTCCCCAAGGCTGATGGCTACTCGATTGGAGCCGGCACCTTTC
GGGGTGGAGAAAAACAAAACCTGCGGGAAATTGCCGCCCAATATGCCCAAAGCTTTGGCGTAGACTTGAAGTCGGTCAAG
CCGTTTGGCCATCCCATCTGCCTCTGGGACGAAGATCAACCGCTTCACACCCAAAATGCCCTCTTGGTGGGAGATGCCGC
CTGCGTTATCGATCCGTTTACCGCTGAAGGGATCCGCCCTTCCCTTCTCACCGGCATGTTGGCGGCCCAGGCCATCGATC
AAGCTCTAGGCGGGGATACAGAAGCTCTGGCGAACTACTCTGCCCGCGTGCAGCAGGAATGGGGCTCAGAAATGCGCTGG
GCTAAGCGGATTGCGGCGTTGTTCTATCGCTTTCCGGGCGTGGGCTACAGGGTGGGCGTCAAACGACCGGGAGCCACTCG
GCGCATGGGCCAGATCTTGGCCGGTGAACTGCGCTACAGCGATGTGGCCAGCTCGGCCATTCGCAAGTTAAGCGGTGGTC
TGCTCGCCTAA

Upstream 100 bases:

>100_bases
ACAAAAAGGCAAGCAACGTGCAGGCAATTCGCTGCAGCCATAATAGGCTAGAAGCTGGTGAGCAGAACCCAGGATGGGGG
GGCCTGGAGTATCGAAAACC

Downstream 100 bases:

>100_bases
GCCCGGCACCGACAGACGCGGGCGAGATCCAGGATCGTCGAAGCGCTTGCCGATCACCAGGCAGTTGCGACCATCCGCTT
GGCGGCTGTAGCTGAGGTGA

Product: geranylgeranyl reductase family protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPQLYDCVIVGAGPAGGSAAYHLAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDFGPAISLKIRQIRYTWRGGDP
VVVDLDLKEPVWMVRRDVFDHYLIQQAQKQGAALQAECPVSGLEWQSDRWQVMTTAGPVWGRYVIGADGAKGSMAKWLGF
QERRRRLAAALEAEVPLLQPQTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTFRGGEKQNLREIAAQYAQSFGVDLKSVK
PFGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAIDQALGGDTEALANYSARVQQEWGSEMRW
AKRIAALFYRFPGVGYRVGVKRPGATRRMGQILAGELRYSDVASSAIRKLSGGLLA

Sequences:

>Translated_376_residues
MPQLYDCVIVGAGPAGGSAAYHLAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDFGPAISLKIRQIRYTWRGGDP
VVVDLDLKEPVWMVRRDVFDHYLIQQAQKQGAALQAECPVSGLEWQSDRWQVMTTAGPVWGRYVIGADGAKGSMAKWLGF
QERRRRLAAALEAEVPLLQPQTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTFRGGEKQNLREIAAQYAQSFGVDLKSVK
PFGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAIDQALGGDTEALANYSARVQQEWGSEMRW
AKRIAALFYRFPGVGYRVGVKRPGATRRMGQILAGELRYSDVASSAIRKLSGGLLA
>Mature_375_residues
PQLYDCVIVGAGPAGGSAAYHLAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDFGPAISLKIRQIRYTWRGGDPV
VVDLDLKEPVWMVRRDVFDHYLIQQAQKQGAALQAECPVSGLEWQSDRWQVMTTAGPVWGRYVIGADGAKGSMAKWLGFQ
ERRRRLAAALEAEVPLLQPQTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTFRGGEKQNLREIAAQYAQSFGVDLKSVKP
FGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAIDQALGGDTEALANYSARVQQEWGSEMRWA
KRIAALFYRFPGVGYRVGVKRPGATRRMGQILAGELRYSDVASSAIRKLSGGLLA

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 41029; Mature: 40898

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLYDCVIVGAGPAGGSAAYHLAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDF
CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
GPAISLKIRQIRYTWRGGDPVVVDLDLKEPVWMVRRDVFDHYLIQQAQKQGAALQAECPV
CCEEEEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SGLEWQSDRWQVMTTAGPVWGRYVIGADGAKGSMAKWLGFQERRRRLAAALEAEVPLLQP
CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCC
QTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTFRGGEKQNLREIAAQYAQSFGVDLKSVK
CCHHHEECCCCCCCCEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC
PFGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAIDQALGGDT
CCCCEEEEECCCCCCCCCCEEEEECCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHCCCH
EALANYSARVQQEWGSEMRWAKRIAALFYRFPGVGYRVGVKRPGATRRMGQILAGELRYS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
DVASSAIRKLSGGLLA
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PQLYDCVIVGAGPAGGSAAYHLAKRGRSVLVLEKDPLPRYKPCGGGVSPMVAAWFDFDF
CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
GPAISLKIRQIRYTWRGGDPVVVDLDLKEPVWMVRRDVFDHYLIQQAQKQGAALQAECPV
CCEEEEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SGLEWQSDRWQVMTTAGPVWGRYVIGADGAKGSMAKWLGFQERRRRLAAALEAEVPLLQP
CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCC
QTAAAHFDFGAVSNGYIWNFPKADGYSIGAGTFRGGEKQNLREIAAQYAQSFGVDLKSVK
CCHHHEECCCCCCCCEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC
PFGHPICLWDEDQPLHTQNALLVGDAACVIDPFTAEGIRPSLLTGMLAAQAIDQALGGDT
CCCCEEEEECCCCCCCCCCEEEEECCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHCCCH
EALANYSARVQQEWGSEMRWAKRIAALFYRFPGVGYRVGVKRPGATRRMGQILAGELRYS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
DVASSAIRKLSGGLLA
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]