| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609759
Identifier: 86609759
GI number: 86609759
Start: 2429085
End: 2429858
Strand: Direct
Name: 86609759
Synonym: CYB_2319
Alternate gene names: NA
Gene position: 2429085-2429858 (Clockwise)
Preceding gene: 86609758
Following gene: 86609762
Centisome position: 79.73
GC content: 63.95
Gene sequence:
>774_bases TTGGTCAGCCCGGCAACGGGAGCGGTCGGTCAGGAGCGGCCCCTGCTGCTGTATTTGCCCGGTATGGATGGCACAGGTAC GTTGTTTTACCGGCAGGCGCAGGCTCTGCAGCGGGAGTTTCGCATTCGCCCCCTGAGTTTGAACCACCCGGAAGCGGGGG ATAGCTGGGAAACCCTGGCCGATTGGGTGGGATCCCAGCTAGAAGCGGGGGCGTATTTGTGTGGGGAATCTTTCGGGGCC TGCCTGGCCTTGTTGGTGGCTGCCCAATGGCCGGAACGGTGCCGTGGCCTCATTTTGGTCAATCCGGCCTCGTCGCTGCG ACGCAGGCCCTGGTGGTGGGCAGGGCATGTTCTCCTGCCTTTTTTGCCGCCGGGGCTCTATCAGCAGTTGTCGGAGCGAG GGTTGGGGGCTTTGGCGGAGCTCAGCCAAATGGAGCCGCCGGATCGGGAGCGGCTGCGCCAGGCAGTTCACAGTGTTGAA CCCACAGTGGCTGCCCAGCGCTTGGCTTTGCTGGGATCCTTTGTTGTGGAGAAGCTGCCTCTGGAGTTGATGACCCTGCC GACTTTGCTGGTGGCAGGGGGCCGGGATCGCCTGTTGCCCTCGGTGCAGGAGGTGGGCTGGCTGGCGGAACGGCTGCCCC AGGCGCAGGTAGAAATCTCGCCCCAGAGCGGCCACGCTTGCCTGCTGGAGCGGCGGATGAACCTGCGGCGTTACCTGCTC AAGCCGGATGGCCTTTTTGCCCCTCTGCTGCTCAATTCTGCTTCGGCCCATTGA
Upstream 100 bases:
>100_bases TCATTCAAGAGCTAACTGCAGCGGCCCGAGAACAGGTGCGATTGGGATTGGCAGAGAGATGAGAAAGTTGAGTGGCGAGC CGGTAGCATCTGCCTCTAGC
Downstream 100 bases:
>100_bases GCATGGACAGGGATCCCCACAGATCTTCTATCCGCTCTGGGCAGGAGCTATCCTTCCCCTCTCGATCCAGCCAAAGGGCT CGCAAGCCTGCTGCTTTTGC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MVSPATGAVGQERPLLLYLPGMDGTGTLFYRQAQALQREFRIRPLSLNHPEAGDSWETLADWVGSQLEAGAYLCGESFGA CLALLVAAQWPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPGLYQQLSERGLGALAELSQMEPPDRERLRQAVHSVE PTVAAQRLALLGSFVVEKLPLELMTLPTLLVAGGRDRLLPSVQEVGWLAERLPQAQVEISPQSGHACLLERRMNLRRYLL KPDGLFAPLLLNSASAH
Sequences:
>Translated_257_residues MVSPATGAVGQERPLLLYLPGMDGTGTLFYRQAQALQREFRIRPLSLNHPEAGDSWETLADWVGSQLEAGAYLCGESFGA CLALLVAAQWPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPGLYQQLSERGLGALAELSQMEPPDRERLRQAVHSVE PTVAAQRLALLGSFVVEKLPLELMTLPTLLVAGGRDRLLPSVQEVGWLAERLPQAQVEISPQSGHACLLERRMNLRRYLL KPDGLFAPLLLNSASAH >Mature_257_residues MVSPATGAVGQERPLLLYLPGMDGTGTLFYRQAQALQREFRIRPLSLNHPEAGDSWETLADWVGSQLEAGAYLCGESFGA CLALLVAAQWPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPGLYQQLSERGLGALAELSQMEPPDRERLRQAVHSVE PTVAAQRLALLGSFVVEKLPLELMTLPTLLVAGGRDRLLPSVQEVGWLAERLPQAQVEISPQSGHACLLERRMNLRRYLL KPDGLFAPLLLNSASAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28376; Mature: 28376
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPATGAVGQERPLLLYLPGMDGTGTLFYRQAQALQREFRIRPLSLNHPEAGDSWETLA CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH DWVGSQLEAGAYLCGESFGACLALLVAAQWPERCRGLILVNPASSLRRRPWWWAGHVLLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEECCHHHHHCCCCEEECCCCCC FLPPGLYQQLSERGLGALAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFVVEKLP CCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC LELMTLPTLLVAGGRDRLLPSVQEVGWLAERLPQAQVEISPQSGHACLLERRMNLRRYLL HHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC KPDGLFAPLLLNSASAH CCCCCCHHHHHCCCCCC >Mature Secondary Structure MVSPATGAVGQERPLLLYLPGMDGTGTLFYRQAQALQREFRIRPLSLNHPEAGDSWETLA CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH DWVGSQLEAGAYLCGESFGACLALLVAAQWPERCRGLILVNPASSLRRRPWWWAGHVLLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEECCHHHHHCCCCEEECCCCCC FLPPGLYQQLSERGLGALAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFVVEKLP CCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC LELMTLPTLLVAGGRDRLLPSVQEVGWLAERLPQAQVEISPQSGHACLLERRMNLRRYLL HHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC KPDGLFAPLLLNSASAH CCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA