| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609706
Identifier: 86609706
GI number: 86609706
Start: 2369616
End: 2370020
Strand: Reverse
Name: 86609706
Synonym: CYB_2264
Alternate gene names: NA
Gene position: 2370020-2369616 (Counterclockwise)
Preceding gene: 86609707
Following gene: 86609705
Centisome position: 77.79
GC content: 56.54
Gene sequence:
>405_bases ATGTTCGACAAACTGCTCTTTCCCATCGATAACTCGCGTGAAACCAGCCACGCCTTGCCCTTGGTGGCGGACATAGCACA GCGCTACAAGAGCCAAGTGTATTTGCTTTCTGTGCTGGATGATACGGAGCTTGACCCGGAGCGAGCCGAGCAAGCCCGGC AGAACATCCACAACCTGCTTAAGCAAACGGAGTCTGGCCTGCATCAAATCGGCCTTAGCAACGTCAAGAGTGAGTATCGA GAGGGGAAGGTACCTTTTGTCATCTGTGATGTGGCAGACGAGCTGGAGATCAGCCTGATTGTGATGGGCTGCCGCGGCCT CACCCTATCTGGAGAGGGGCAGAACAACTCCGTGAGCCACCGCGTGATCGATCTCTCCCCCTGCCCGGTGTTGGTCGTGC CCTGA
Upstream 100 bases:
>100_bases CAGGGGTGGAATGAGGCCATTGAGCTCCCGGTAAAATTGATAGAATAGGGCAAGCCCCCAACTTGGATAGGGAATGGGCT TGACCGCGGAATCCTCGGCT
Downstream 100 bases:
>100_bases GGAGAGGGATCCCATTGACCAAAAGGCGCGGCAAGCCCCGTCCTTCAGGGCGGGGAAGGATAGCGCCGACCGTAGCCGAC GCCCTTTAAAAACGCAGTGC
Product: universal stress family protein
Products: NA
Alternate protein names: USP Sll1654 [H]
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFDKLLFPIDNSRETSHALPLVADIAQRYKSQVYLLSVLDDTELDPERAEQARQNIHNLLKQTESGLHQIGLSNVKSEYR EGKVPFVICDVADELEISLIVMGCRGLTLSGEGQNNSVSHRVIDLSPCPVLVVP
Sequences:
>Translated_134_residues MFDKLLFPIDNSRETSHALPLVADIAQRYKSQVYLLSVLDDTELDPERAEQARQNIHNLLKQTESGLHQIGLSNVKSEYR EGKVPFVICDVADELEISLIVMGCRGLTLSGEGQNNSVSHRVIDLSPCPVLVVP >Mature_134_residues MFDKLLFPIDNSRETSHALPLVADIAQRYKSQVYLLSVLDDTELDPERAEQARQNIHNLLKQTESGLHQIGLSNVKSEYR EGKVPFVICDVADELEISLIVMGCRGLTLSGEGQNNSVSHRVIDLSPCPVLVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 14898; Mature: 14898
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDKLLFPIDNSRETSHALPLVADIAQRYKSQVYLLSVLDDTELDPERAEQARQNIHNLL CCCCEECCCCCCCCCHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH KQTESGLHQIGLSNVKSEYREGKVPFVICDVADELEISLIVMGCRGLTLSGEGQNNSVSH HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCEEEECCCCCCCCCE RVIDLSPCPVLVVP EEEEECCCCEEEEC >Mature Secondary Structure MFDKLLFPIDNSRETSHALPLVADIAQRYKSQVYLLSVLDDTELDPERAEQARQNIHNLL CCCCEECCCCCCCCCHHCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH KQTESGLHQIGLSNVKSEYREGKVPFVICDVADELEISLIVMGCRGLTLSGEGQNNSVSH HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCEEEECCCCCCCCCE RVIDLSPCPVLVVP EEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]