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The map label for this gene is ribF [H]

Identifier: 86609648

GI number: 86609648

Start: 2308899

End: 2309831

Strand: Direct

Name: ribF [H]

Synonym: CYB_2202

Alternate gene names: 86609648

Gene position: 2308899-2309831 (Clockwise)

Preceding gene: 86609647

Following gene: 86609653

Centisome position: 75.78

GC content: 59.06

Gene sequence:

>933_bases
GTGCACATCACTTCTGATCTGGCTCAAACCTTGCGACCCACCGCTGTGGCCATCGGGAACTTCGATGGCTTGCATCTGGG
CCATCAGAAGGTGCTGCAGCCGATTCGAGATTCTCTTCAGGGGGTACGTACTGTCCTCACCTTTCATCCCCATCCCCAGG
AAGTCTTGACGAGGCGGCCTCAGCTGTTGCTCACTCCCCCTGCCGAAAAGCTGGATCTGTTGGCGCAAATGGGCTTTGAG
CAGGTGGTACTGCTCCCCTTCACCCCTGCATTTGCCTGCCAGCCCCCCCAAGAGTTTATCCAAACGGTACTTGAACAGGG
CCTGCGCGTTCGCCATCTCAGCGTCGGTTGGGATTTTTGCTTTGGTCACCGTCGCTCCGGCAACGCCCAAACGCTCCAGG
CTTGGGGATCCGAGCGCTGCATTCCGGTGGAGGTAATCCCGGAGACGAAACTCAACGGGGAACGGGTGAGCAGCTCTCGC
ATTCGAGCTGCCTTGGCGACTGGGGAGGTGTCCACCGCCGAAGCGCTCTTGGGTCGTCCTTACCGGCTAACGGGAGAAGT
GGTGCAAGGGGATCAGCGGGGCCGACAACTGGGCTTTCCCACCGCCAACCTCCGCTTGCCTCCGGAGAAGTTTTTGCCCC
GCGATGGGGTGTACAGCGTTTGGGTGGATGTGCCTGCTGCTGCGGCAGCTCTACCTGGGGTGATGAACATTGGCCATCGG
CCCACCTTTGCCGGTTTACAGCACACCGTCGAGGTGCATCTATTGGATTGGACAGGAGATCTCTACAGGCAAGAGGTGCG
GGTGGCGCTACGGGGCTTTATCCGCCCAGAGCGGAGATTTCCCACGGTGGCAGATTTGATTCAGCAAATTCAGCAAGATT
GCCAAACAGCCCGCCAGCAATTGGGTTTGGCTGAGCAAGTGGGTATGGTGTAG

Upstream 100 bases:

>100_bases
GCGACGGAGCTTGTGGGGCGTAGTGGGCTTGAGTGGGTTGGTGGCCCTGCTGTGGCCTCTGGGGTAGGCAGTTGGTTGGC
TGTTTTTAGGATCCCGAACA

Downstream 100 bases:

>100_bases
GGGGATCTATGCCGAAGAGAGCTCGCAAGCGCCAAGGCTCACCCAGGCGCTGGTGCCATCTCGCCAGTATTCTTTTTTCC
AGATGGGGGCGTTGTGCTTG

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVRTVLTFHPHPQEVLTRRPQLLLTPPAEKLDLLAQMGFE
QVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWDFCFGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGERVSSSR
IRAALATGEVSTAEALLGRPYRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNIGHR
PTFAGLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQTARQQLGLAEQVGMV

Sequences:

>Translated_310_residues
MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVRTVLTFHPHPQEVLTRRPQLLLTPPAEKLDLLAQMGFE
QVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWDFCFGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGERVSSSR
IRAALATGEVSTAEALLGRPYRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNIGHR
PTFAGLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQTARQQLGLAEQVGMV
>Mature_310_residues
MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVRTVLTFHPHPQEVLTRRPQLLLTPPAEKLDLLAQMGFE
QVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWDFCFGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGERVSSSR
IRAALATGEVSTAEALLGRPYRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNIGHR
PTFAGLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQTARQQLGLAEQVGMV

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Homo sapiens, GI269973877, Length=133, Percent_Identity=34.5864661654135, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786208, Length=294, Percent_Identity=41.156462585034, Blast_Score=194, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI17541882, Length=125, Percent_Identity=34.4, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24644927, Length=135, Percent_Identity=34.8148148148148, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34461; Mature: 34461

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVRTVLTFHPHPQEVLTRRP
CCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
QLLLTPPAEKLDLLAQMGFEQVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWDFC
CEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
FGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGERVSSSRIRAALATGEVSTAEALLGRP
CCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
YRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNIGHR
CEECHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCHHHHHCCHHHHCCCC
PTFAGLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQTARQQ
CCHHHHCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LGLAEQVGMV
CCCHHHHCCC
>Mature Secondary Structure
MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVRTVLTFHPHPQEVLTRRP
CCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
QLLLTPPAEKLDLLAQMGFEQVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWDFC
CEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHH
FGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGERVSSSRIRAALATGEVSTAEALLGRP
CCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
YRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNIGHR
CEECHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCHHHHHCCHHHHCCCC
PTFAGLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQTARQQ
CCHHHHCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LGLAEQVGMV
CCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]