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The map label for this gene is yegE [C]

Identifier: 86609610

GI number: 86609610

Start: 2264955

End: 2266970

Strand: Reverse

Name: yegE [C]

Synonym: CYB_2163

Alternate gene names: 86609610

Gene position: 2266970-2264955 (Counterclockwise)

Preceding gene: 86609615

Following gene: 86609609

Centisome position: 74.41

GC content: 58.43

Gene sequence:

>2016_bases
ATGGTTGAAAGGGGGACTGCTGGGCCAGACCAGGCTGGCAGCGTTTACGATGCGCTGACGCGGGCCGATCTGTGGAATCC
CCAGGTCATGTACCGTGGGCGCCCGGTACAGGCTCGGGGACGGGCTGTGCTGCGCACCATGTTCGAGAGCGTCAGCGATG
GGTTGTTTGTCCTTGAGTGTCTGCCCCCGGAGCCAGAAAGAGGCTCACCTCAACCGCGCTGTCGGTTTTTGGTGGGTAAC
CCGGCCTTTCGCAGGATGTTTTTTCTCTCCTCTCGACCTATCGAGGGAGAAGAGCTCCAGAGTTGTCTACCGCCTTCTCT
GGCTGCGCAGATTCAACTGCACACCGAACACTGCCTCAGCCATGGCCGGCAAGTGAGCTTTGAGCTGAGCCTAACGGCCT
CTGCCGCTCCCGACCCAGAGTCGACCCATGTTCTAATCGTTACCCTTTCTCCAGTAGTTGAGGAGAACAAGCCAATCAGC
CGAATTGTCGGCTCCTGTCAGGACATCACAGCACGCAAGCAAGTGGAGTGGCAGCTACAGCGCAGCCAAAAGCAACTGTT
GGAGCACAACCGGGCTCTGATGGAGCTCACCCGGCACAAAGCCCTCAGCCAAGGAGACTTACAAGCTGCTCTGCAACAGA
TTTGTACTACAGCCGCCCATACCCTGGGGGTGGCACGGGTGGGGGTCTGGCTCTACACGTCGGAGCGCTCCAGCATTCGC
TGCATCAATCAATTCGAGATCACCCCAGACAACCCCGAGGGATCCCATACTCAAGGGGCGGAGATCTGGGCCAAAGACTA
TCCCCGTTATTTTCAAGCCCTGGAGCAAGAGCGCACCATTGCTGCCGACCAAGTGGTGGCGGATCCCCGCACCGCCGAGT
TCGGCAATTCCTACCTGACAGCAATGGGAGTGATCTCGATGCTGGATGCCCCCATTCGACTGGAAGGACGGATGGTGGGT
GTTCTCTGCCACGAGCACATTGGATCCCCTCGCCACTGGACCTTGGAAGAGCAAAACTTCGCCGGATCCCTGGCGGATTT
GGTGTCTCTGGCCCTCGAGATCTCGGAGCGCCGGCAAGTGGAAGAGGAGCTGCGCCAGGCTGAGGAGCGCTATCGCAATT
TTTTCGAGAATGCGGTAGAGGGCATTTTTTTCACCGATGCGGCAGGTCGGTATCTCTCCGCCAACCCGATGCTGGCCCAG
ATCTGCGGCTACAGCTCCCCCGAAGAATTGATGCGCGAAGCGAAAGAGGCGGGCAAGCGGCAGCTCTATGTGGATCCCAG
CCAGTGGGAGGAATTTGTGCGGCTATTGCAGGAGCAGGGATCCGTACGCGGCTTTGAGTACCGGCTGCGGCGGCGGGATG
GCTCGATCATCTGGGTCCGAGAAAAGGCCCGTTTGGTTAAAGATAAAGCCGGAAATCTCCTCGGCTATGAAGGCATCTGC
GAAGACATCACCGCCCAAAAGCAGAGCTTAGCCTACATGGAGTTTCGCGCTCATCATGATGCCCTGACAGGTTTGGTGAA
CCGCGAATCCTTTCGGGAGCGGCTGCAGCAGACCCTGCAGCAATACTACAGTGAATGCCTGGCCCTCTTCTTTGTGGATT
TGGATCACTTCAAAGACATTAACGATACCTTCGGCCACAGTGTCGGCGATGCCCTGTTGCAGGGGGTAGCCGAACGGCTA
ACCAAGTGCGTTCGACCTGGAGATATCGTCGCCCGCTGGGGAGGGGATGAGTTTACCCTGCTGCTGCCCCGAATTGGCAG
CTCCACAGTGGCAGCGCGTCTGGCTCAGCGGATTGTCGATGTCTTCCAAACTCCCTTCTCCTGCGAGGGCCATTCCCTTT
CCGTGACCTGCAGCATCGGCGTCGCCCTCTACCCCCAAGACGGCGTAGAAGTGTCCACCCTTTTGCACCATGCCGACTTG
GCCCTCTACCAGGTCAAGGAAAATGGCCGCAGCGGCTTTCGACTCTATCGGCCAGTTTCAGGGATCCCGGCAGCAGTCCG
CAACACTATCCTGTAA

Upstream 100 bases:

>100_bases
ATAGGATGACCGTAGAATGGCAGAGACAGCGTGAATTCATAGCTGTTTTTTTCGGCTTGCCCTCCCCGTTGCCCGAGCGT
CTACTGGGTGTTCCTAGCCT

Downstream 100 bases:

>100_bases
GCTGGTTGGGTCAGAGGCCCTTCTGGTTTGTGATTTGTGCATCCGGGTCGTAGCTATCGCCGTCTCATTCCCTTCATTCG
GCCCCATCTGTGGATGTTGT

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MVERGTAGPDQAGSVYDALTRADLWNPQVMYRGRPVQARGRAVLRTMFESVSDGLFVLECLPPEPERGSPQPRCRFLVGN
PAFRRMFFLSSRPIEGEELQSCLPPSLAAQIQLHTEHCLSHGRQVSFELSLTASAAPDPESTHVLIVTLSPVVEENKPIS
RIVGSCQDITARKQVEWQLQRSQKQLLEHNRALMELTRHKALSQGDLQAALQQICTTAAHTLGVARVGVWLYTSERSSIR
CINQFEITPDNPEGSHTQGAEIWAKDYPRYFQALEQERTIAADQVVADPRTAEFGNSYLTAMGVISMLDAPIRLEGRMVG
VLCHEHIGSPRHWTLEEQNFAGSLADLVSLALEISERRQVEEELRQAEERYRNFFENAVEGIFFTDAAGRYLSANPMLAQ
ICGYSSPEELMREAKEAGKRQLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGNLLGYEGIC
EDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQYYSECLALFFVDLDHFKDINDTFGHSVGDALLQGVAERL
TKCVRPGDIVARWGGDEFTLLLPRIGSSTVAARLAQRIVDVFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADL
ALYQVKENGRSGFRLYRPVSGIPAAVRNTIL

Sequences:

>Translated_671_residues
MVERGTAGPDQAGSVYDALTRADLWNPQVMYRGRPVQARGRAVLRTMFESVSDGLFVLECLPPEPERGSPQPRCRFLVGN
PAFRRMFFLSSRPIEGEELQSCLPPSLAAQIQLHTEHCLSHGRQVSFELSLTASAAPDPESTHVLIVTLSPVVEENKPIS
RIVGSCQDITARKQVEWQLQRSQKQLLEHNRALMELTRHKALSQGDLQAALQQICTTAAHTLGVARVGVWLYTSERSSIR
CINQFEITPDNPEGSHTQGAEIWAKDYPRYFQALEQERTIAADQVVADPRTAEFGNSYLTAMGVISMLDAPIRLEGRMVG
VLCHEHIGSPRHWTLEEQNFAGSLADLVSLALEISERRQVEEELRQAEERYRNFFENAVEGIFFTDAAGRYLSANPMLAQ
ICGYSSPEELMREAKEAGKRQLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGNLLGYEGIC
EDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQYYSECLALFFVDLDHFKDINDTFGHSVGDALLQGVAERL
TKCVRPGDIVARWGGDEFTLLLPRIGSSTVAARLAQRIVDVFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADL
ALYQVKENGRSGFRLYRPVSGIPAAVRNTIL
>Mature_671_residues
MVERGTAGPDQAGSVYDALTRADLWNPQVMYRGRPVQARGRAVLRTMFESVSDGLFVLECLPPEPERGSPQPRCRFLVGN
PAFRRMFFLSSRPIEGEELQSCLPPSLAAQIQLHTEHCLSHGRQVSFELSLTASAAPDPESTHVLIVTLSPVVEENKPIS
RIVGSCQDITARKQVEWQLQRSQKQLLEHNRALMELTRHKALSQGDLQAALQQICTTAAHTLGVARVGVWLYTSERSSIR
CINQFEITPDNPEGSHTQGAEIWAKDYPRYFQALEQERTIAADQVVADPRTAEFGNSYLTAMGVISMLDAPIRLEGRMVG
VLCHEHIGSPRHWTLEEQNFAGSLADLVSLALEISERRQVEEELRQAEERYRNFFENAVEGIFFTDAAGRYLSANPMLAQ
ICGYSSPEELMREAKEAGKRQLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGNLLGYEGIC
EDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQYYSECLALFFVDLDHFKDINDTFGHSVGDALLQGVAERL
TKCVRPGDIVARWGGDEFTLLLPRIGSSTVAARLAQRIVDVFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADL
ALYQVKENGRSGFRLYRPVSGIPAAVRNTIL

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=352, Percent_Identity=29.2613636363636, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI1787541, Length=182, Percent_Identity=32.967032967033, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87081881, Length=292, Percent_Identity=32.1917808219178, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1787262, Length=160, Percent_Identity=36.875, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1788956, Length=153, Percent_Identity=35.2941176470588, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI145693134, Length=162, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI87081977, Length=160, Percent_Identity=33.75, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1786584, Length=170, Percent_Identity=32.9411764705882, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI87082007, Length=164, Percent_Identity=34.1463414634146, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787802, Length=175, Percent_Identity=32, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787816, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788085, Length=158, Percent_Identity=29.746835443038, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081974, Length=101, Percent_Identity=37.6237623762376, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787056, Length=169, Percent_Identity=33.1360946745562, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081921, Length=173, Percent_Identity=24.2774566473988, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 75363; Mature: 75363

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERGTAGPDQAGSVYDALTRADLWNPQVMYRGRPVQARGRAVLRTMFESVSDGLFVLEC
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
LPPEPERGSPQPRCRFLVGNPAFRRMFFLSSRPIEGEELQSCLPPSLAAQIQLHTEHCLS
CCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHEEEHHHHHHC
HGRQVSFELSLTASAAPDPESTHVLIVTLSPVVEENKPISRIVGSCQDITARKQVEWQLQ
CCCEEEEEEEEEECCCCCCCCCEEEEEEECCHHCCCCCHHHHHCCHHHHHHHHHHHHHHH
RSQKQLLEHNRALMELTRHKALSQGDLQAALQQICTTAAHTLGVARVGVWLYTSERSSIR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEE
CINQFEITPDNPEGSHTQGAEIWAKDYPRYFQALEQERTIAADQVVADPRTAEFGNSYLT
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
AMGVISMLDAPIRLEGRMVGVLCHEHIGSPRHWTLEEQNFAGSLADLVSLALEISERRQV
HHHHHHHHCCCEEECCEEEEEEHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
EEELRQAEERYRNFFENAVEGIFFTDAAGRYLSANPMLAQICGYSSPEELMREAKEAGKR
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHCCCCCHHHHHHHHHHCCCC
QLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGNLLGYEGIC
EEEECHHHHHHHHHHHHHCCCCCCHHHHHEECCCCEEEEEHHHHHHHHHCCCCCCCHHHH
EDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQYYSECLALFFVDLDHFKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDTFGHSVGDALLQGVAERLTKCVRPGDIVARWGGDEFTLLLPRIGSSTVAARLAQRIVD
HHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
VFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADLALYQVKENGRSGFRLYRPVS
HHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCC
GIPAAVRNTIL
CCCHHHHHCCC
>Mature Secondary Structure
MVERGTAGPDQAGSVYDALTRADLWNPQVMYRGRPVQARGRAVLRTMFESVSDGLFVLEC
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
LPPEPERGSPQPRCRFLVGNPAFRRMFFLSSRPIEGEELQSCLPPSLAAQIQLHTEHCLS
CCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHEEEHHHHHHC
HGRQVSFELSLTASAAPDPESTHVLIVTLSPVVEENKPISRIVGSCQDITARKQVEWQLQ
CCCEEEEEEEEEECCCCCCCCCEEEEEEECCHHCCCCCHHHHHCCHHHHHHHHHHHHHHH
RSQKQLLEHNRALMELTRHKALSQGDLQAALQQICTTAAHTLGVARVGVWLYTSERSSIR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEE
CINQFEITPDNPEGSHTQGAEIWAKDYPRYFQALEQERTIAADQVVADPRTAEFGNSYLT
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
AMGVISMLDAPIRLEGRMVGVLCHEHIGSPRHWTLEEQNFAGSLADLVSLALEISERRQV
HHHHHHHHCCCEEECCEEEEEEHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
EEELRQAEERYRNFFENAVEGIFFTDAAGRYLSANPMLAQICGYSSPEELMREAKEAGKR
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHCCCCCHHHHHHHHHHCCCC
QLYVDPSQWEEFVRLLQEQGSVRGFEYRLRRRDGSIIWVREKARLVKDKAGNLLGYEGIC
EEEECHHHHHHHHHHHHHCCCCCCHHHHHEECCCCEEEEEHHHHHHHHHCCCCCCCHHHH
EDITAQKQSLAYMEFRAHHDALTGLVNRESFRERLQQTLQQYYSECLALFFVDLDHFKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDTFGHSVGDALLQGVAERLTKCVRPGDIVARWGGDEFTLLLPRIGSSTVAARLAQRIVD
HHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
VFQTPFSCEGHSLSVTCSIGVALYPQDGVEVSTLLHHADLALYQVKENGRSGFRLYRPVS
HHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCC
GIPAAVRNTIL
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]