| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609584
Identifier: 86609584
GI number: 86609584
Start: 2230498
End: 2231103
Strand: Direct
Name: 86609584
Synonym: CYB_2138
Alternate gene names: NA
Gene position: 2230498-2231103 (Clockwise)
Preceding gene: 86609583
Following gene: 86609586
Centisome position: 73.21
GC content: 55.45
Gene sequence:
>606_bases ATGACTGAATCCCATGAAACCTTGGTGCTCCGCGACGAGCAAAACCAGCCTCTCAAGTGCGAGATCCTGCGGCAGGTGGT CATCGACGAGCAGACCTATGCTCTGGTGACTCCCGTTGATGCTGTGATCAAAGTGCTGGTTTGGGAAGGGGAAGAAGAAC CCAGCCAAGCGGTGAACGGCGATGCCAACATGGAAGGGATCCTGGACGAGCCGGATCCCGAAGAGCTACAGGCTACCCTG CCCACCATCCAGGCTGTCTTGGGGGAGTTGAACCTCACCTTGCAGCAAAATGGCTTCGACATCCTCACGGTTCAGGGGGA ATTGCCCCCAGTCGAAGAGGAAGATGTGTTCGAGCTGGGCGAGAGCGAGGAAGATGCCCAGGAGTTTCAACTGCTAGCTA CCTTTTTCTACCAAGAGAAGAAATACGGCATCTTTACCCCCCTCGATCCCGTTTTGCTCTACGCCGCTCTGCCTGACGAA GGGGATCCCTACCTGCTCACCCCCGATGAGCCGCCAGAGCTTTTTGATCAGCTCTATGCCCTGCTGCTGGATCTCGATGA GGAATGGGAAGACGGAGATGACGAAGAAGATGAAGACGAAGATTAG
Upstream 100 bases:
>100_bases CCGGTGGGCCTGGAAGGGATCCCTCAGCATTGCAGGGGGGCAGAACATGGGAGAATGAGCTTCTGTACACCCCCGTCTTT CCTACCCTGGGCTGTTTTCA
Downstream 100 bases:
>100_bases GCGGTCAACCCCTTCTGTTCTGCCGAGTTGGATACTCCTGCCCAGCCAGTCGCCTCGGCGGTGCGGAGCACCATAGGGAT AGAGGTGGTGAAACTACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTESHETLVLRDEQNQPLKCEILRQVVIDEQTYALVTPVDAVIKVLVWEGEEEPSQAVNGDANMEGILDEPDPEELQATL PTIQAVLGELNLTLQQNGFDILTVQGELPPVEEEDVFELGESEEDAQEFQLLATFFYQEKKYGIFTPLDPVLLYAALPDE GDPYLLTPDEPPELFDQLYALLLDLDEEWEDGDDEEDEDED
Sequences:
>Translated_201_residues MTESHETLVLRDEQNQPLKCEILRQVVIDEQTYALVTPVDAVIKVLVWEGEEEPSQAVNGDANMEGILDEPDPEELQATL PTIQAVLGELNLTLQQNGFDILTVQGELPPVEEEDVFELGESEEDAQEFQLLATFFYQEKKYGIFTPLDPVLLYAALPDE GDPYLLTPDEPPELFDQLYALLLDLDEEWEDGDDEEDEDED >Mature_200_residues TESHETLVLRDEQNQPLKCEILRQVVIDEQTYALVTPVDAVIKVLVWEGEEEPSQAVNGDANMEGILDEPDPEELQATLP TIQAVLGELNLTLQQNGFDILTVQGELPPVEEEDVFELGESEEDAQEFQLLATFFYQEKKYGIFTPLDPVLLYAALPDEG DPYLLTPDEPPELFDQLYALLLDLDEEWEDGDDEEDEDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22771; Mature: 22640
Theoretical pI: Translated: 3.22; Mature: 3.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESHETLVLRDEQNQPLKCEILRQVVIDEQTYALVTPVDAVIKVLVWEGEEEPSQAVNG CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHEEHHCCCCCCCHHHCCC DANMEGILDEPDPEELQATLPTIQAVLGELNLTLQQNGFDILTVQGELPPVEEEDVFELG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCHHHHHCC ESEEDAQEFQLLATFFYQEKKYGIFTPLDPVLLYAALPDEGDPYLLTPDEPPELFDQLYA CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHHHHHHHH LLLDLDEEWEDGDDEEDEDED HHHCCCHHCCCCCCCCCCCCC >Mature Secondary Structure TESHETLVLRDEQNQPLKCEILRQVVIDEQTYALVTPVDAVIKVLVWEGEEEPSQAVNG CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHEEHHCCCCCCCHHHCCC DANMEGILDEPDPEELQATLPTIQAVLGELNLTLQQNGFDILTVQGELPPVEEEDVFELG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCHHHHHCC ESEEDAQEFQLLATFFYQEKKYGIFTPLDPVLLYAALPDEGDPYLLTPDEPPELFDQLYA CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHHHHHHHH LLLDLDEEWEDGDDEEDEDED HHHCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA