| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is mgtE
Identifier: 86609561
GI number: 86609561
Start: 2208276
End: 2209715
Strand: Direct
Name: mgtE
Synonym: CYB_2114
Alternate gene names: NA
Gene position: 2208276-2209715 (Clockwise)
Preceding gene: 86609555
Following gene: 86609562
Centisome position: 72.48
GC content: 56.74
Gene sequence:
>1440_bases TTGGCTGTTGACCTCCTGGTTCTCTTCATCCCGGCTGACCCCAACGTTCGGAGGTTTATCATGCGGCACAACGTTCTTCG CGATCTCCTAACCCCTGCTTCCTTGGAAGCCGCCAAGCGAGAGGCCAACCGCGCTCCCATTGCCGAGCTGGTGCAGCAGT TGATGGAGATTTCACCTCGGCAGCGGGTACTGGCTTTTCGCTTGCTGGAAAAAGACAGAGCCATTGCAGTGTTTGAGTAT CTGCGGCCCGAAGAGCAGGCCGATCTCATTCGCAGCATGGAAAGCCCAGAAGTGATCCAGCTCATAGAAGCTCTGCCACC TGATGAGCGGGTACGTCTGTTTGAGGAGTTGCCGGCCAAAGTAACCAAGCGCCTCATTGCCAACCTCAGCCCAGAAGCTC GGGAAGCAGTGAATATCTTGCTGGGTTATCCAGAGCGCAGTGCCGGTCGGCTGATGAACCTGCGCTACTTGTCGGTACGG GATACCATCACCGTCGGGGCTGCTCTGGCCAGCGTGCGGGACTCTCAACTGGGAGACGATGAGCTGGATGTGATTTTTGT GGTGGACGATCAGCGGTTCTACAAAGGTTTGGTTCGCACCGTGCGCCTCGTGAAAGCAGATCCGGATTTGCCCATTCGGG AGCTGATTGAGGGATCGGATATTTTTGCTCGGGTTACCGACCGGGATCTCCAGGCAGCCCGTTTGCTCAAAGATTCCGGC TTGCCGGCCATTCCGGTGGTGGATACGGAAGGGCGCTTGGTGGGTGACATCACTTTTGAAGATGTGATCAATTTGGTGGA AGAAGAGGCTACGGATGCTGCTCTGGCCCAAGCAGGGGTGGGCAACTTGCTCAGCCGAGACAAGGTTTGGAGCGAGCGCC TGGTTAAAGGCTCCCGTTGGTATGCCGTCCGCCTGCGCATCACGTTTTTAATCATCACCTTGATTGGCGGCATGGTGGTG GGGGGAGTGATCCAAACCTTTGAGGAAGTGTTGCAAGCAGTGACGGCAGCGGCTATTTTCATCCCCTTGGTCATGGATAT GGGCGGTAATGTCGGCACCCAATCTACGACCATCTTTGCCCGTGGCTTGGCTTGGGGCCACATCAACGTGCGGCAGTTTC TCCCCTATTTGCTGCGGGAAGCCAGCATTGGTGGCATTATCGGTGCGATCCTGGGGGCCACGGCTGGGGTGATTGCCTAC TTCTGGCAGGGGGCACCGAATGGGATCCCACAATTGGGTCTAGCGGTGGGCTTGGCTCTGGCCATTGTCCTCACTTTGGG GGCTATCTTGGGCGCCATTTTGCCCTGGGTGATGTTAAAGCTGGGCTTTGACCACGCTCCGGGAGCGGATCCTTTTATCA CCACCATTAAAGACTTCACCGGCCTCTGGGTGTATTTCACCCTGGTGGCTTGGCTAGTCGGGGTTGAAGTGGAGCTCTAG
Upstream 100 bases:
>100_bases TGCGATCCAAGCTGGGCTTGGAGGCCTGGCGCTAGACCTACGGCTTGCTGCGCGGCCATCCAAGGGTTTCAGGGCTTCCC TGTGAGCCTCGGAGCACCGG
Downstream 100 bases:
>100_bases GGCTGCGCCGGCGCTGGATCCAGGGGGCACCTCACCGGCAAAGCGCGTTCCAGGAACGAATAATCCAGCCCTTCTTGAGA AATCAGCCTTTCAGAGTCTC
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAVDLLVLFIPADPNVRRFIMRHNVLRDLLTPASLEAAKREANRAPIAELVQQLMEISPRQRVLAFRLLEKDRAIAVFEY LRPEEQADLIRSMESPEVIQLIEALPPDERVRLFEELPAKVTKRLIANLSPEAREAVNILLGYPERSAGRLMNLRYLSVR DTITVGAALASVRDSQLGDDELDVIFVVDDQRFYKGLVRTVRLVKADPDLPIRELIEGSDIFARVTDRDLQAARLLKDSG LPAIPVVDTEGRLVGDITFEDVINLVEEEATDAALAQAGVGNLLSRDKVWSERLVKGSRWYAVRLRITFLIITLIGGMVV GGVIQTFEEVLQAVTAAAIFIPLVMDMGGNVGTQSTTIFARGLAWGHINVRQFLPYLLREASIGGIIGAILGATAGVIAY FWQGAPNGIPQLGLAVGLALAIVLTLGAILGAILPWVMLKLGFDHAPGADPFITTIKDFTGLWVYFTLVAWLVGVEVEL
Sequences:
>Translated_479_residues MAVDLLVLFIPADPNVRRFIMRHNVLRDLLTPASLEAAKREANRAPIAELVQQLMEISPRQRVLAFRLLEKDRAIAVFEY LRPEEQADLIRSMESPEVIQLIEALPPDERVRLFEELPAKVTKRLIANLSPEAREAVNILLGYPERSAGRLMNLRYLSVR DTITVGAALASVRDSQLGDDELDVIFVVDDQRFYKGLVRTVRLVKADPDLPIRELIEGSDIFARVTDRDLQAARLLKDSG LPAIPVVDTEGRLVGDITFEDVINLVEEEATDAALAQAGVGNLLSRDKVWSERLVKGSRWYAVRLRITFLIITLIGGMVV GGVIQTFEEVLQAVTAAAIFIPLVMDMGGNVGTQSTTIFARGLAWGHINVRQFLPYLLREASIGGIIGAILGATAGVIAY FWQGAPNGIPQLGLAVGLALAIVLTLGAILGAILPWVMLKLGFDHAPGADPFITTIKDFTGLWVYFTLVAWLVGVEVEL >Mature_478_residues AVDLLVLFIPADPNVRRFIMRHNVLRDLLTPASLEAAKREANRAPIAELVQQLMEISPRQRVLAFRLLEKDRAIAVFEYL RPEEQADLIRSMESPEVIQLIEALPPDERVRLFEELPAKVTKRLIANLSPEAREAVNILLGYPERSAGRLMNLRYLSVRD TITVGAALASVRDSQLGDDELDVIFVVDDQRFYKGLVRTVRLVKADPDLPIRELIEGSDIFARVTDRDLQAARLLKDSGL PAIPVVDTEGRLVGDITFEDVINLVEEEATDAALAQAGVGNLLSRDKVWSERLVKGSRWYAVRLRITFLIITLIGGMVVG GVIQTFEEVLQAVTAAAIFIPLVMDMGGNVGTQSTTIFARGLAWGHINVRQFLPYLLREASIGGIIGAILGATAGVIAYF WQGAPNGIPQLGLAVGLALAIVLTLGAILGAILPWVMLKLGFDHAPGADPFITTIKDFTGLWVYFTLVAWLVGVEVEL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 52636; Mature: 52505
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDLLVLFIPADPNVRRFIMRHNVLRDLLTPASLEAAKREANRAPIAELVQQLMEISPR CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHH QRVLAFRLLEKDRAIAVFEYLRPEEQADLIRSMESPEVIQLIEALPPDERVRLFEELPAK HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH VTKRLIANLSPEAREAVNILLGYPERSAGRLMNLRYLSVRDTITVGAALASVRDSQLGDD HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCC ELDVIFVVDDQRFYKGLVRTVRLVKADPDLPIRELIEGSDIFARVTDRDLQAARLLKDSG CEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHCC LPAIPVVDTEGRLVGDITFEDVINLVEEEATDAALAQAGVGNLLSRDKVWSERLVKGSRW CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE YAVRLRITFLIITLIGGMVVGGVIQTFEEVLQAVTAAAIFIPLVMDMGGNVGTQSTTIFA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RGLAWGHINVRQFLPYLLREASIGGIIGAILGATAGVIAYFWQGAPNGIPQLGLAVGLAL ECCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AIVLTLGAILGAILPWVMLKLGFDHAPGADPFITTIKDFTGLWVYFTLVAWLVGVEVEL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVDLLVLFIPADPNVRRFIMRHNVLRDLLTPASLEAAKREANRAPIAELVQQLMEISPR CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHH QRVLAFRLLEKDRAIAVFEYLRPEEQADLIRSMESPEVIQLIEALPPDERVRLFEELPAK HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH VTKRLIANLSPEAREAVNILLGYPERSAGRLMNLRYLSVRDTITVGAALASVRDSQLGDD HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCC ELDVIFVVDDQRFYKGLVRTVRLVKADPDLPIRELIEGSDIFARVTDRDLQAARLLKDSG CEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHCC LPAIPVVDTEGRLVGDITFEDVINLVEEEATDAALAQAGVGNLLSRDKVWSERLVKGSRW CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE YAVRLRITFLIITLIGGMVVGGVIQTFEEVLQAVTAAAIFIPLVMDMGGNVGTQSTTIFA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RGLAWGHINVRQFLPYLLREASIGGIIGAILGATAGVIAYFWQGAPNGIPQLGLAVGLAL ECCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AIVLTLGAILGAILPWVMLKLGFDHAPGADPFITTIKDFTGLWVYFTLVAWLVGVEVEL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA