| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609541
Identifier: 86609541
GI number: 86609541
Start: 2189704
End: 2190357
Strand: Reverse
Name: 86609541
Synonym: CYB_2093
Alternate gene names: NA
Gene position: 2190357-2189704 (Counterclockwise)
Preceding gene: 86609542
Following gene: 86609540
Centisome position: 71.89
GC content: 62.54
Gene sequence:
>654_bases GTGTTGGCGATTTACCTGCATGGATTCGGCTCTGGGCCGCAGTCGGCCAAGGCAACTTTCTTTCGGCAGCGGCTGCAGCA GGTGGGGATCCCTGTTCAGGTGCCCGATCTGAACCAGGACAATTTTGCCCAGCTCACCTTGACCCGCCAGATCCAGCAGG TTTCCAGCCAGCTTGCCGAGATGAACTACCCCCCTGTCACCCTCATCGGCTCTAGCCTGGGGGGGCTGGTGGCTGCCTGG GTTGCCGAACAACAACCCTGTGTGCAGCGCTTGGTGCTCTTGGCGCCGGCTTTTGGCTTTTTAGGCCATTGGCTGCCGCG GCTGGGGGCAGAGGCGGTGGAGACTTGGCGGCGAACCGGACAACTCATGGTGTTTCACTACGGAGAAGGCCGCCCTCTCC CTTTGGAGTACGGCTTTGTCGCCGATGCCCAGCGCTACCCGGATGGGGGGTTACGACGGCCTGTGCCCACCCTAATTGTG CACGGGATCCAAGACGACACCATCCCCATTCAAGCCAGTCGAGACTATGTGGCCCGTCGCCCCTGGGCCCAACTGGTGGC GGTGGAGAGCGACCACGCCCTGACCGATGTGTTGGATCCCATTTGGCAGATCACCAGCCGCTTCTGCGGGTGGGGGATGG AGACGGGGCAGTAG
Upstream 100 bases:
>100_bases CCGCATCACCTGGACGGTAGCGACCCTTTTCCTCTCCATCAGCGTGGTGTTGGGGGCGGGCTGGCTCTCGGCAGCCACAG GGCCATAGGGATCCCTTTCC
Downstream 100 bases:
>100_bases GGTTGTTAAAGGGGATCCCTGTCCCGTGCTTGCCCATTCGCGAAAGCGTCGCGTAGCGATAATGTCTATGCAATCCAAAG TGCTGTGCCTACAACAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ
Sequences:
>Translated_217_residues MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ >Mature_217_residues MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAEMNYPPVTLIGSSLGGLVAAW VAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTGQLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIV HGIQDDTIPIQASRDYVARRPWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24117; Mature: 24117
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAE CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH MNYPPVTLIGSSLGGLVAAWVAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTG CCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC QLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIVHGIQDDTIPIQASRDYVARR CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHC PWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLAIYLHGFGSGPQSAKATFFRQRLQQVGIPVQVPDLNQDNFAQLTLTRQIQQVSSQLAE CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH MNYPPVTLIGSSLGGLVAAWVAEQQPCVQRLVLLAPAFGFLGHWLPRLGAEAVETWRRTG CCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC QLMVFHYGEGRPLPLEYGFVADAQRYPDGGLRRPVPTLIVHGIQDDTIPIQASRDYVARR CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHC PWAQLVAVESDHALTDVLDPIWQITSRFCGWGMETGQ CHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA