The gene/protein map for NC_008253 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609526

Identifier: 86609526

GI number: 86609526

Start: 2174263

End: 2175306

Strand: Reverse

Name: 86609526

Synonym: CYB_2078

Alternate gene names: NA

Gene position: 2175306-2174263 (Counterclockwise)

Preceding gene: 86609527

Following gene: 86609525

Centisome position: 71.4

GC content: 61.69

Gene sequence:

>1044_bases
ATGCGCATTTCCATCCAGCCGGGGAGTGGGATCCCTGGCTCCGTGCAGCTCTTTAATTTGCTCTGCTTCGCCATCGCCTG
TGGGCAGTTTCCTCCCGGCTGCCGCCTGCCCAGCACCCGTCAATTGGCCATGCAAACGGGCCTGCATCGCAACACCATCC
ACAAGGTTTACCGCCAATTGGAGGCCATGGGCCTGGTGGAAACCCGCGCTGGATCTGGCATTTACGTGAGCCGCTCCGCC
CGCCAGGTGGTTAACTACTCTCGCGGCCTGGGGGAAAACCTGGATCGATCCCGACAGGTCCTGGAGCAGGTGCGCCAGGG
CATCGACCAGCTGCTGCAGCAGGGGTTTTCTTTGGAGCAGGTGCGGGATCTGCTGCTAGCGGAGATCGATTGGCGATTGC
GCTGCAGTGCCCAAGTGCTGGTGTGTGTGCCCAACCGGGATTTGGGTACAGGACAACTGATGGCCCAGCAAATCCAGCAG
ACTTTGGGCATCCGGGTCCAGTTGGTGCCCCTGGAGGAGCTGGCCACCGTTCTGGATCAGATCCATTCCGGCACTGTGGT
GACGCTGCACTATTTTCTCAGCGCCGTCGAGGCCATTGCCCAACCCCGGGGGGCCCGTGTTCTGACGGTGGAGGTGTCTG
ACTACGCCCGCGAAATTGCCCTGATCCGCCAATTGCCTTCCTACGCCTGTCTGGGGCTGGTGAGCATCAGCACTGCCCTG
CTGGAAGTTGCCGAGGTGATCGTCCACAGTTTGCGGGGAGACCTGCTGGTGCTGACGGCAGTGATCTCGGATACGGAACG
GGTGGGATCCCTAATCCGCCGCGCCCATACGCTGATTTGCGATGAGGCCAGCTACCCCACCCTGCGGGTCTTGGTGCGCC
AAGCCCGAGCCGATCTAATCCGCACACCCAACCTAGTCTGCGCCACCCCCCACATCGGAGAAGCAGCCATGGCCGAGCTG
AGACGGGAATTGGGTGGGATCCCTGGAGCCGGAGGGGATAGAGAGGCGGGCGGCAGCGATTTGCAGAGTAAAGAAACGCA
TTAA

Upstream 100 bases:

>100_bases
GCAGGCAGTTGACACTCCCGCCGACTGAAGTCGAGGGATTCTTACGTAGCCCAGAAACGGGCTCGCAACGGCGTTGTCAA
AGGGAGAAAAACGGGCCATG

Downstream 100 bases:

>100_bases
GCCTTGTTGCAGGTGAGCCATTTTGCGGATGACAGGCTGCCCAAGATCGTGCTTAAGTGAAAATACGGTAAAAGCTCTCT
CATTTTGATTCATCGCTGAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR Family Protein; GntR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Repressor

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRISIQPGSGIPGSVQLFNLLCFAIACGQFPPGCRLPSTRQLAMQTGLHRNTIHKVYRQLEAMGLVETRAGSGIYVSRSA
RQVVNYSRGLGENLDRSRQVLEQVRQGIDQLLQQGFSLEQVRDLLLAEIDWRLRCSAQVLVCVPNRDLGTGQLMAQQIQQ
TLGIRVQLVPLEELATVLDQIHSGTVVTLHYFLSAVEAIAQPRGARVLTVEVSDYAREIALIRQLPSYACLGLVSISTAL
LEVAEVIVHSLRGDLLVLTAVISDTERVGSLIRRAHTLICDEASYPTLRVLVRQARADLIRTPNLVCATPHIGEAAMAEL
RRELGGIPGAGGDREAGGSDLQSKETH

Sequences:

>Translated_347_residues
MRISIQPGSGIPGSVQLFNLLCFAIACGQFPPGCRLPSTRQLAMQTGLHRNTIHKVYRQLEAMGLVETRAGSGIYVSRSA
RQVVNYSRGLGENLDRSRQVLEQVRQGIDQLLQQGFSLEQVRDLLLAEIDWRLRCSAQVLVCVPNRDLGTGQLMAQQIQQ
TLGIRVQLVPLEELATVLDQIHSGTVVTLHYFLSAVEAIAQPRGARVLTVEVSDYAREIALIRQLPSYACLGLVSISTAL
LEVAEVIVHSLRGDLLVLTAVISDTERVGSLIRRAHTLICDEASYPTLRVLVRQARADLIRTPNLVCATPHIGEAAMAEL
RRELGGIPGAGGDREAGGSDLQSKETH
>Mature_347_residues
MRISIQPGSGIPGSVQLFNLLCFAIACGQFPPGCRLPSTRQLAMQTGLHRNTIHKVYRQLEAMGLVETRAGSGIYVSRSA
RQVVNYSRGLGENLDRSRQVLEQVRQGIDQLLQQGFSLEQVRDLLLAEIDWRLRCSAQVLVCVPNRDLGTGQLMAQQIQQ
TLGIRVQLVPLEELATVLDQIHSGTVVTLHYFLSAVEAIAQPRGARVLTVEVSDYAREIALIRQLPSYACLGLVSISTAL
LEVAEVIVHSLRGDLLVLTAVISDTERVGSLIRRAHTLICDEASYPTLRVLVRQARADLIRTPNLVCATPHIGEAAMAEL
RRELGGIPGAGGDREAGGSDLQSKETH

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37876; Mature: 37876

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISIQPGSGIPGSVQLFNLLCFAIACGQFPPGCRLPSTRQLAMQTGLHRNTIHKVYRQL
CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EAMGLVETRAGSGIYVSRSARQVVNYSRGLGENLDRSRQVLEQVRQGIDQLLQQGFSLEQ
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VRDLLLAEIDWRLRCSAQVLVCVPNRDLGTGQLMAQQIQQTLGIRVQLVPLEELATVLDQ
HHHHHHHHCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHH
IHSGTVVTLHYFLSAVEAIAQPRGARVLTVEVSDYAREIALIRQLPSYACLGLVSISTAL
HCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEVAEVIVHSLRGDLLVLTAVISDTERVGSLIRRAHTLICDEASYPTLRVLVRQARADLI
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RTPNLVCATPHIGEAAMAELRRELGGIPGAGGDREAGGSDLQSKETH
CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRISIQPGSGIPGSVQLFNLLCFAIACGQFPPGCRLPSTRQLAMQTGLHRNTIHKVYRQL
CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EAMGLVETRAGSGIYVSRSARQVVNYSRGLGENLDRSRQVLEQVRQGIDQLLQQGFSLEQ
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VRDLLLAEIDWRLRCSAQVLVCVPNRDLGTGQLMAQQIQQTLGIRVQLVPLEELATVLDQ
HHHHHHHHCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHH
IHSGTVVTLHYFLSAVEAIAQPRGARVLTVEVSDYAREIALIRQLPSYACLGLVSISTAL
HCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEVAEVIVHSLRGDLLVLTAVISDTERVGSLIRRAHTLICDEASYPTLRVLVRQARADLI
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RTPNLVCATPHIGEAAMAELRRELGGIPGAGGDREAGGSDLQSKETH
CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA