Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86609522

Identifier: 86609522

GI number: 86609522

Start: 2170908

End: 2171189

Strand: Direct

Name: 86609522

Synonym: CYB_2074

Alternate gene names: NA

Gene position: 2170908-2171189 (Clockwise)

Preceding gene: 86609521

Following gene: 86609523

Centisome position: 71.25

GC content: 57.8

Gene sequence:

>282_bases
ATGGCAACCAAAGTTCTGATCCCCTCTCCCCTGCGCCCCTACACCGACAACCTGGAAGCTGTCGAGATCGAGGGCAGCAA
TGTTGGCGAAGTGATGGGCAACCTCATCGCCCGCTATGGCGAGCTGAAGCGCCACCTCTACACCGAGGATGGGAAGCTGC
GCAATTTTGTCAATGTCTACCTCAACGACGAGGATGTGCGCACGTTGCCCCAAGGCAACAACACCCCCGTGGGAGAACAA
GCCGTCATCAGCATCGTTCCCGCTATTGCTGGAGGGTTGTGA

Upstream 100 bases:

>100_bases
TAGACAGCCCCAACAAGATCGACAAACGGATAGGTCAGCCCAGATCCTCTGGATCCTCAAAAGTCTCCAGTAGATACCCA
AGATCTCTCCCCGAACTCCC

Downstream 100 bases:

>100_bases
GCATGTTGAACCTGGATACCAGCCAAGTCAGCCTCTCCCGCGAGGAGATGGAGCGGTTTTCTCGGCATTTGATCCTGCCC
GAGGTGGGCCTAGAAGGACA

Product: ThiS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQ
AVISIVPAIAGGL

Sequences:

>Translated_93_residues
MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQ
AVISIVPAIAGGL
>Mature_92_residues
ATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVYLNDEDVRTLPQGNNTPVGEQA
VISIVPAIAGGL

Specific function: Unknown

COG id: COG1977

COG function: function code H; Molybdopterin converting factor, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfur carrier protein CysO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR016155
- InterPro:   IPR003749 [H]

Pfam domain/function: PF02597 ThiS [H]

EC number: NA

Molecular weight: Translated: 10137; Mature: 10005

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVY
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LNDEDVRTLPQGNNTPVGEQAVISIVPAIAGGL
ECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATKVLIPSPLRPYTDNLEAVEIEGSNVGEVMGNLIARYGELKRHLYTEDGKLRNFVNVY
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LNDEDVRTLPQGNNTPVGEQAVISIVPAIAGGL
ECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]