| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609504
Identifier: 86609504
GI number: 86609504
Start: 2155498
End: 2156064
Strand: Reverse
Name: 86609504
Synonym: CYB_2056
Alternate gene names: NA
Gene position: 2156064-2155498 (Counterclockwise)
Preceding gene: 86609505
Following gene: 86609503
Centisome position: 70.77
GC content: 59.61
Gene sequence:
>567_bases ATGAGAGCAGGGAAATGTTCGCAGGAACTTGGCCTTGCTCGGCGAGGAATGAGGCTGGCCTTGGCGGTTCTGGTGATGGG GAGCCTGGGATCCCTGGTGATGCCCCATTCTGCAGAGGCGCAGTCGGGTTTGGTGATCACCGGCAGTGAAGGGGTACCTG TCCTCAGCTATCGGCTCGATTTTGGCGGGGTTCGCAGTCGTTTGGATCGCTATCGCCTGACCATTCCCCCCCAGAATGTG GCGGTGGCAGAAGTGCAGATCAACGGGGACAGGAATTTCGATGGCCGCATCGATCCGGAAAGTGTCCGCCTGGAGGTAGA AGGCCGCCCTGTAGAGCTGGATCAAGTGTACTGGAACGAGGAGTTTCGCTCTCTAGAGGTGGTGGCCCGTCAACCCATTG CTGCCGGTCAGGAGATCCGTCTGGTGCTCTCCAATGTGCGCAACCCCTCGTCTGCCGGCATCTATCGGGTGGAGGCGCGG GTACGGGGTACGGAACCCAACCCCCTCTTCCGGAATGTGGGCAACTGGCTGATTACCATTGAAGACCCAGAGCGGATTGG CTTCTGA
Upstream 100 bases:
>100_bases CCTTGCTTGCCATCGGTCAGGCTGTCTACAGGCCGCGCTAGTGAGCTTTGAAGGTGCTGAGGTGTTTCAACCAGCGGAGG TTTGGGTGTTGAGAGCAGTG
Downstream 100 bases:
>100_bases TCTATTGACCCGATGATCTGACCTACTGTCGATCTTTGCGGCGATCCTATAGGCACAGCCCTTTTGCGGGTCTGGGACAG CGACACCCAAGTTCCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRAGKCSQELGLARRGMRLALAVLVMGSLGSLVMPHSAEAQSGLVITGSEGVPVLSYRLDFGGVRSRLDRYRLTIPPQNV AVAEVQINGDRNFDGRIDPESVRLEVEGRPVELDQVYWNEEFRSLEVVARQPIAAGQEIRLVLSNVRNPSSAGIYRVEAR VRGTEPNPLFRNVGNWLITIEDPERIGF
Sequences:
>Translated_188_residues MRAGKCSQELGLARRGMRLALAVLVMGSLGSLVMPHSAEAQSGLVITGSEGVPVLSYRLDFGGVRSRLDRYRLTIPPQNV AVAEVQINGDRNFDGRIDPESVRLEVEGRPVELDQVYWNEEFRSLEVVARQPIAAGQEIRLVLSNVRNPSSAGIYRVEAR VRGTEPNPLFRNVGNWLITIEDPERIGF >Mature_188_residues MRAGKCSQELGLARRGMRLALAVLVMGSLGSLVMPHSAEAQSGLVITGSEGVPVLSYRLDFGGVRSRLDRYRLTIPPQNV AVAEVQINGDRNFDGRIDPESVRLEVEGRPVELDQVYWNEEFRSLEVVARQPIAAGQEIRLVLSNVRNPSSAGIYRVEAR VRGTEPNPLFRNVGNWLITIEDPERIGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20823; Mature: 20823
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGKCSQELGLARRGMRLALAVLVMGSLGSLVMPHSAEAQSGLVITGSEGVPVLSYRLD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCCEEEEEEEC FGGVRSRLDRYRLTIPPQNVAVAEVQINGDRNFDGRIDPESVRLEVEGRPVELDQVYWNE CCHHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEHHEEECH EFRSLEVVARQPIAAGQEIRLVLSNVRNPSSAGIYRVEARVRGTEPNPLFRNVGNWLITI HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEEEE EDPERIGF ECHHHCCC >Mature Secondary Structure MRAGKCSQELGLARRGMRLALAVLVMGSLGSLVMPHSAEAQSGLVITGSEGVPVLSYRLD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCCEEEEEEEC FGGVRSRLDRYRLTIPPQNVAVAEVQINGDRNFDGRIDPESVRLEVEGRPVELDQVYWNE CCHHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEHHEEECH EFRSLEVVARQPIAAGQEIRLVLSNVRNPSSAGIYRVEARVRGTEPNPLFRNVGNWLITI HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEEEE EDPERIGF ECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA