Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yjeF [C]

Identifier: 86609499

GI number: 86609499

Start: 2150252

End: 2151814

Strand: Direct

Name: yjeF [C]

Synonym: CYB_2051

Alternate gene names: 86609499

Gene position: 2150252-2151814 (Clockwise)

Preceding gene: 86609498

Following gene: 86609509

Centisome position: 70.58

GC content: 62.7

Gene sequence:

>1563_bases
ATGGGTTCTCGTTGCCAGTTCGATCCGGCCATCAGCCTGGTCAGTTCCGCACAGATGCAGCGCATTGAGGAGCAGATCTT
CTCTGCCGGCATGCCCGTTGCCGCTCTGATGGAGAAGGTGGGGCTGGCCGTTGTTGCTCAGTTGCAGAAGGATTTTCCGC
AAGCCCATCGCATTGGGATCCTCTGTGGGACAGGGCACAACGGTGGCGATGGGTTGGTGGTTGGGCGGGAGCTATGGCTG
GCCCAAAAGTCGGTGAAGGTGTGGCTGGGCAAGCCGGATCTCAAACCCCTGACGGCAGACCACGCCCGCTATCTCAAGGC
GCTGGGGGCAGAGTTTGTGGAGAGTCTTGAAGAGCTGGCCGATTGCGATTTGTTAATTGATGCCCTGTTTGGGATCGGTC
TGAACCGGCCTTTGGGGGAGCCTTGGGCGGGGGCGGTGGGGTGGGCCAATGGCAGTGGGATCCCCATCCTCAGCCTGGAT
TTGCCGTCTGGCCTCAACGACCAAACCGGGGAAGTCTGGGGCTGCTGCATTCGCGCCAGCCATACCTATACCCTTGGCCT
TTGGAAACGGGGGCTGTGGCAGGAAGCAGCTCTGCCTTGGGTAGGACGGTTACATCGCGTTGATTTTGGGATCCCCCCTT
GGGCCTGCCCAGAGGATGAGGTTCCCCGGTTGTTGCTGCGGCCTTGGCAGCACTTTCCTGCGGATCCCCCTTTGGATACC
CACAAATACCGCCAGGGATCCCTGTTGTTGGTGGCAGGCTCGGCAGCCTATGCTGGAGCAGCGGTGTTGGCGGGGCTGGG
ATCCCGCGCCAGCGGGGTGGGCATGGTGACGATGGCGGCGCCGGCGGAGTTGAAAGGACTGATCCACAGCGCCTTGCCAG
AGGTTTTGGTTCATGCCTGGGAAGGGATCCCTTCTCTGCCGCCGGTTGCCGAGAAACCCTTTCAGGCGGTGGCCGTGGGG
CCGGGCTTGGGAGAAACCCGTTTGCCCCTGCTGGAGATCCTGCTGCGGGATTGGGCCGGGATCCCCTGGGTGATCGATGC
GGATGGGCTGAATGCTCTGGCGGAGATGGGGGTAGAGCGCCTTCAGGAAAAAGGGATCCAGGCCATCCTCACCCCCCACC
TGGGGGAATTTCGGCGGCTTTTTCCGGGGATCCCGCTTGGGGATCGCATCGAGGCAGCCCAAAGGGCGGCAGCCCAGAGT
GGAGCAGTGGTGGTTTTGAAAGGGGCGCGGACGGTGATCGCCTCTCCCACTGGGGAATGCTGGGTGAACCCGGAAAGCAC
ACCGGCTTTGGCCCGCGGTGGCAGCGGCGATGTCTTGACCGGTTTGATCGGGGGCCTAGTGGCGCGAAGAAGAGCTCAAG
CCGGTCAACCTTTGGACGCTCCCGCCCTGCTCAGTTGCGCCTGTGCGGGGGTGTGGTGGCATGCTCAGGCGGCTGTCCAT
CTGGCGCAAGAACGCGGCCTAACGGGAGTGGATCCGGCACGGCTGGCGGAGCATTTGCCCCAGGCGCTGCAAGCTCTTCA
ACAGGAGGAAGTTGTTCATACCGTGTCGCAGGCGGGTGAATAA

Upstream 100 bases:

>100_bases
CGGATGGGAATGTGATAGAGCTAAGCTCGATTAGCGCAACTTAGCCATGAGCCATCTCCCCTCAGCAATGCCGCCGGTTG
CAACAGCGTTGCGTAGCGAT

Downstream 100 bases:

>100_bases
ATACTCTAAGTCATAGCCCAAGCCTTCCTGCTTGCTCCTACCCTCCACTAGGGGTCACCCGGTAAAGGGCACAGGAATAG
AATTCTGGCTGGTTACTCGA

Product: carbohydrate kinase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MGSRCQFDPAISLVSSAQMQRIEEQIFSAGMPVAALMEKVGLAVVAQLQKDFPQAHRIGILCGTGHNGGDGLVVGRELWL
AQKSVKVWLGKPDLKPLTADHARYLKALGAEFVESLEELADCDLLIDALFGIGLNRPLGEPWAGAVGWANGSGIPILSLD
LPSGLNDQTGEVWGCCIRASHTYTLGLWKRGLWQEAALPWVGRLHRVDFGIPPWACPEDEVPRLLLRPWQHFPADPPLDT
HKYRQGSLLLVAGSAAYAGAAVLAGLGSRASGVGMVTMAAPAELKGLIHSALPEVLVHAWEGIPSLPPVAEKPFQAVAVG
PGLGETRLPLLEILLRDWAGIPWVIDADGLNALAEMGVERLQEKGIQAILTPHLGEFRRLFPGIPLGDRIEAAQRAAAQS
GAVVVLKGARTVIASPTGECWVNPESTPALARGGSGDVLTGLIGGLVARRRAQAGQPLDAPALLSCACAGVWWHAQAAVH
LAQERGLTGVDPARLAEHLPQALQALQQEEVVHTVSQAGE

Sequences:

>Translated_520_residues
MGSRCQFDPAISLVSSAQMQRIEEQIFSAGMPVAALMEKVGLAVVAQLQKDFPQAHRIGILCGTGHNGGDGLVVGRELWL
AQKSVKVWLGKPDLKPLTADHARYLKALGAEFVESLEELADCDLLIDALFGIGLNRPLGEPWAGAVGWANGSGIPILSLD
LPSGLNDQTGEVWGCCIRASHTYTLGLWKRGLWQEAALPWVGRLHRVDFGIPPWACPEDEVPRLLLRPWQHFPADPPLDT
HKYRQGSLLLVAGSAAYAGAAVLAGLGSRASGVGMVTMAAPAELKGLIHSALPEVLVHAWEGIPSLPPVAEKPFQAVAVG
PGLGETRLPLLEILLRDWAGIPWVIDADGLNALAEMGVERLQEKGIQAILTPHLGEFRRLFPGIPLGDRIEAAQRAAAQS
GAVVVLKGARTVIASPTGECWVNPESTPALARGGSGDVLTGLIGGLVARRRAQAGQPLDAPALLSCACAGVWWHAQAAVH
LAQERGLTGVDPARLAEHLPQALQALQQEEVVHTVSQAGE
>Mature_519_residues
GSRCQFDPAISLVSSAQMQRIEEQIFSAGMPVAALMEKVGLAVVAQLQKDFPQAHRIGILCGTGHNGGDGLVVGRELWLA
QKSVKVWLGKPDLKPLTADHARYLKALGAEFVESLEELADCDLLIDALFGIGLNRPLGEPWAGAVGWANGSGIPILSLDL
PSGLNDQTGEVWGCCIRASHTYTLGLWKRGLWQEAALPWVGRLHRVDFGIPPWACPEDEVPRLLLRPWQHFPADPPLDTH
KYRQGSLLLVAGSAAYAGAAVLAGLGSRASGVGMVTMAAPAELKGLIHSALPEVLVHAWEGIPSLPPVAEKPFQAVAVGP
GLGETRLPLLEILLRDWAGIPWVIDADGLNALAEMGVERLQEKGIQAILTPHLGEFRRLFPGIPLGDRIEAAQRAAAQSG
AVVVLKGARTVIASPTGECWVNPESTPALARGGSGDVLTGLIGGLVARRRAQAGQPLDAPALLSCACAGVWWHAQAAVHL
AQERGLTGVDPARLAEHLPQALQALQQEEVVHTVSQAGE

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI91984773, Length=211, Percent_Identity=26.0663507109005, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI119709830, Length=231, Percent_Identity=29.8701298701299, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1790609, Length=492, Percent_Identity=31.9105691056911, Blast_Score=166, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17554656, Length=290, Percent_Identity=25.5172413793103, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17509719, Length=163, Percent_Identity=29.4478527607362, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322698, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221329809, Length=161, Percent_Identity=32.9192546583851, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 55095; Mature: 54964

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS01049 UPF0031_1 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSRCQFDPAISLVSSAQMQRIEEQIFSAGMPVAALMEKVGLAVVAQLQKDFPQAHRIGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEE
LCGTGHNGGDGLVVGRELWLAQKSVKVWLGKPDLKPLTADHARYLKALGAEFVESLEELA
EEECCCCCCCCEEEHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DCDLLIDALFGIGLNRPLGEPWAGAVGWANGSGIPILSLDLPSGLNDQTGEVWGCCIRAS
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECC
HTYTLGLWKRGLWQEAALPWVGRLHRVDFGIPPWACPEDEVPRLLLRPWQHFPADPPLDT
CEEEEHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCC
HKYRQGSLLLVAGSAAYAGAAVLAGLGSRASGVGMVTMAAPAELKGLIHSALPEVLVHAW
CCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
EGIPSLPPVAEKPFQAVAVGPGLGETRLPLLEILLRDWAGIPWVIDADGLNALAEMGVER
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
LQEKGIQAILTPHLGEFRRLFPGIPLGDRIEAAQRAAAQSGAVVVLKGARTVIASPTGEC
HHHCCCCEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCE
WVNPESTPALARGGSGDVLTGLIGGLVARRRAQAGQPLDAPALLSCACAGVWWHAQAAVH
EECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LAQERGLTGVDPARLAEHLPQALQALQQEEVVHTVSQAGE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSRCQFDPAISLVSSAQMQRIEEQIFSAGMPVAALMEKVGLAVVAQLQKDFPQAHRIGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEE
LCGTGHNGGDGLVVGRELWLAQKSVKVWLGKPDLKPLTADHARYLKALGAEFVESLEELA
EEECCCCCCCCEEEHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DCDLLIDALFGIGLNRPLGEPWAGAVGWANGSGIPILSLDLPSGLNDQTGEVWGCCIRAS
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECC
HTYTLGLWKRGLWQEAALPWVGRLHRVDFGIPPWACPEDEVPRLLLRPWQHFPADPPLDT
CEEEEHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCC
HKYRQGSLLLVAGSAAYAGAAVLAGLGSRASGVGMVTMAAPAELKGLIHSALPEVLVHAW
CCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
EGIPSLPPVAEKPFQAVAVGPGLGETRLPLLEILLRDWAGIPWVIDADGLNALAEMGVER
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
LQEKGIQAILTPHLGEFRRLFPGIPLGDRIEAAQRAAAQSGAVVVLKGARTVIASPTGEC
HHHCCCCEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCE
WVNPESTPALARGGSGDVLTGLIGGLVARRRAQAGQPLDAPALLSCACAGVWWHAQAAVH
EECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LAQERGLTGVDPARLAEHLPQALQALQQEEVVHTVSQAGE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]