Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609481

Identifier: 86609481

GI number: 86609481

Start: 2135170

End: 2135931

Strand: Direct

Name: 86609481

Synonym: CYB_2033

Alternate gene names: NA

Gene position: 2135170-2135931 (Clockwise)

Preceding gene: 86609480

Following gene: 86609482

Centisome position: 70.08

GC content: 64.17

Gene sequence:

>762_bases
ATGGCTAACTACCCGATGCGAGGCCGTTCTTCTCCTGCTTCTGGCGGTTTTCCCTTGGGCACCTTGGTGGTGGTGAGTGT
CTCGGTTGGGGCTCTGGCCGCCTTGGCTTGGCAGTTGTGGCAGCTCGTCGCCCCCATGTTGGCCCCCCCTGCCCCGCCTC
AATTTCCGCAGGCGGTGCGCTTGGATCCCTTGCCCCGCCCAGCCAGTTTTCCCTCTCCCCCCTCTGGCCCTGCTGCAGGC
ACTGTTGACCCTGAGGGATTTCCCCCCGGCAGCCGCGGGCGGGTGATCGAGCCAATTGGCCTGGCAATCCGCAGCCAACC
TTCTGCCGATGGAGCCTACCAAGGGGGAATTGTGGTGGGGGAAACGGTGACGGTGTTGGAGTACAGCGCCGATGGTCGTT
GGCAACGGGTGCGGCGGGAGTTGAACGGACAAGAGGGCTGGGTGCGCGCCGGCAATTTGGGCCCTGTGGATGGTGCTTCA
GCTTCAACTTCTACAGCTCCCACGGTTGAACCCAACCCTGAATTAACTCCTTTGCCGGCTCGACCCCCCATGGTGGCAGT
AGGTGGGCAGGGACGGGTGATCGAGCCCATTGGCCTGGCGCTGCGGGCCACTCCAGAGCGGGAGGGAACCTACATTGGTG
GTGTGCCCATGAACGAGGTGGTGACGGTGCTGGGCCTCAGCGAAGATGGTCGTTGGCAGCGCATCCGCCGTCAGAATGGG
CAGGAAGGTTGGGTGCGGGCGGGGAATCTGGCGCAGGAGTAG

Upstream 100 bases:

>100_bases
CGCAGCAGTCGTGCTCTGGCTTTCGTAAATCCCCGGTTTTGACGGGGATCCCATCTTCTCTGCGGATTCTTGCCTGCAGC
ATTGCGGGAAGGTATTTCGG

Downstream 100 bases:

>100_bases
CCCTTGCCATAGGCATAGCCCTACAGATGCCCTGGTGGGGGATTGTGACGACCGGGAAGGCTGTGTTTCGGTAGAACAGT
ACCGATGCCAAGCTATGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAG
TVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGAS
ASTSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG
QEGWVRAGNLAQE

Sequences:

>Translated_253_residues
MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAG
TVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGAS
ASTSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG
QEGWVRAGNLAQE
>Mature_252_residues
ANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVRLDPLPRPASFPSPPSGPAAGT
VDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASA
STSTAPTVEPNPELTPLPARPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNGQ
EGWVRAGNLAQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26466; Mature: 26335

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDPLPRPASFPSPPSGPAAGTVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCEEEC
ETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASASTSTAPTVEPNPELTPLPA
CEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG
CCCEEEECCCCCEECCCCEEEEECCCCCCCEECCCCHHHHEEEEECCCCCHHHHHHHCCC
QEGWVRAGNLAQE
CCCCEECCCCCCC
>Mature Secondary Structure 
ANYPMRGRSSPASGGFPLGTLVVVSVSVGALAALAWQLWQLVAPMLAPPAPPQFPQAVR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDPLPRPASFPSPPSGPAAGTVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCEEEC
ETVTVLEYSADGRWQRVRRELNGQEGWVRAGNLGPVDGASASTSTAPTVEPNPELTPLPA
CEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPPMVAVGGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNG
CCCEEEECCCCCEECCCCEEEEECCCCCCCEECCCCHHHHEEEEECCCCCHHHHHHHCCC
QEGWVRAGNLAQE
CCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA