| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609448
Identifier: 86609448
GI number: 86609448
Start: 2105208
End: 2105576
Strand: Direct
Name: 86609448
Synonym: CYB_1999
Alternate gene names: NA
Gene position: 2105208-2105576 (Clockwise)
Preceding gene: 86609447
Following gene: 86609449
Centisome position: 69.1
GC content: 59.08
Gene sequence:
>369_bases ATGGCTCTACCCTTTCATCCAGCTCTTTCACCCTCCTTCAATCCCTATCTTGACAATCCAATGATGCTTGACAATCCCTT CCTCCCCTACATTGCCGTCATGGTGGCCGGGCTGGTGGCCGCTGTTGTGATTGGCTCGATGGCTTTCTTCAACTCCAAGC GCCCTGCCGGTTGGGAGAGTGCCAGTCGCCCGCGGTATGTGCCGCAGTACGGTCAAGACGGCGATACCCCGCCGGAGTGG GAGATTGGCTGGACGGAGAAGGCCGAGCGATGGAACGGACGGCTGGCCATGCTGGGGTTTGCCATCAGTGTTGTGGTAGA GGCCATAGTGGGCCACAGCGTGTTTGCCTCTGCACTGGGGATCCACTGA
Upstream 100 bases:
>100_bases AGTGGCTAGGTCTGCAATAACCTGCAATAATCTGTCAAAGATCTTTTCGGTAGAGCCACATCGGGCATCTCAGAGAGTTT CTCTTCGGCTTTGAGATGTT
Downstream 100 bases:
>100_bases TCCAAGTTGAAAGCTGTCCGGCGCCCAGTCGTCTCGAGGAAATAAAGGCGGAAGCTATGGAAGCCTGCTTTTTCCTCATG CGTGCTCTTTGTCTTTGCCG
Product: CAB/ELIP/HLIP family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MALPFHPALSPSFNPYLDNPMMLDNPFLPYIAVMVAGLVAAVVIGSMAFFNSKRPAGWESASRPRYVPQYGQDGDTPPEW EIGWTEKAERWNGRLAMLGFAISVVVEAIVGHSVFASALGIH
Sequences:
>Translated_122_residues MALPFHPALSPSFNPYLDNPMMLDNPFLPYIAVMVAGLVAAVVIGSMAFFNSKRPAGWESASRPRYVPQYGQDGDTPPEW EIGWTEKAERWNGRLAMLGFAISVVVEAIVGHSVFASALGIH >Mature_121_residues ALPFHPALSPSFNPYLDNPMMLDNPFLPYIAVMVAGLVAAVVIGSMAFFNSKRPAGWESASRPRYVPQYGQDGDTPPEWE IGWTEKAERWNGRLAMLGFAISVVVEAIVGHSVFASALGIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13319; Mature: 13188
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPFHPALSPSFNPYLDNPMMLDNPFLPYIAVMVAGLVAAVVIGSMAFFNSKRPAGWES CCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ASRPRYVPQYGQDGDTPPEWEIGWTEKAERWNGRLAMLGFAISVVVEAIVGHSVFASALG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IH CC >Mature Secondary Structure ALPFHPALSPSFNPYLDNPMMLDNPFLPYIAVMVAGLVAAVVIGSMAFFNSKRPAGWES CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ASRPRYVPQYGQDGDTPPEWEIGWTEKAERWNGRLAMLGFAISVVVEAIVGHSVFASALG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA