| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is lgt-2 [H]
Identifier: 86609410
GI number: 86609410
Start: 2055814
End: 2056638
Strand: Reverse
Name: lgt-2 [H]
Synonym: CYB_1960
Alternate gene names: 86609410
Gene position: 2056638-2055814 (Counterclockwise)
Preceding gene: 86609412
Following gene: 86609409
Centisome position: 67.5
GC content: 60.36
Gene sequence:
>825_bases ATGACTTTGGTCTTACAATCCCCCGGCCCGGTTGTGTTTAGTTGGGGGCCGCTCAGCCTGCGCTGGTATGGCTTATTGAT CGGCCTGGCAATGGTGTTGGGCTTGCTCCTGGCTCGCCATCTGGCAGCTCGGCGTGGCCTTCCCCCCAGTTCCATGCCTG ATCTGCTGGTGTGGTTGGTGGTTGGATCCCTGCCCCTTGCTCGCCTGTACTATGTGGCCTTTGAGTGGGAACGCTATCGA GATGGCCCTTGGTGGCAGGTCTTGGCCCTCTGGCAGGGGGGCATTGCCATTCACGGTGCCTTGATCGGCGGCAGTGCGGC GCTTTACCTGTTCGCCCGGCGGCACCGGCTGAGTTTTTGGTTGCTAGCCGATTGCCTTGTTCCCTCCCTCAGCCTTGGTC AGGGGATCGGACGTTGGGGCAACTTCTTCAACAATGAAGCCTACGGAAAGGTGTTGCCTCCGGATAGCCCTCTGTGGGTA CAACTGCAGCTGCCTGATGGATCGCGCGTCCATCCCACTTTTTTGTACGAATCCCTCTGGAACTTTGGTCTCTTCGGGCT CCTGCTCTTTTTAAGCTACCGGCGCCAGCTTCCCCCCGGCACCCTCTTGGGCCTCTACCTGGTGGGGTACAGCCTGGGGC GCTTCTGGATCGAAGGCCTGCGCACCGATAGCCTCATGCTGGGATCCCTGCGGGTGGCGCAGGGGGTGAGCCTGTTGCTC ATTGGAGCAGGCCTGGCCGCAATCTTGACAGCTCCCAAACGCGTTTCTGTTCACCCAAACGAGGCAACTTCCTCGCCTGG GATCCCCGCCCCAAAGGAGTTGTAA
Upstream 100 bases:
>100_bases CTCTGGGAGAGGGGCTGGGGGTGAGGGCAGGTCTTCTGCATAGCCTTGCAGAGCGGGTAGAGTGGGCTAAAGGGATCTGC TCAGGAATGTCCCCACGGTC
Downstream 100 bases:
>100_bases GCCATGGCCAGCGAACAGAATGAAGAGCTCTGGCAGCAAGCCTCCCCTCTGCTGCTGCCATCCGCCGCTGCTACCCAATC ACTAGGGGCCCTCGTAGCTC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTLVLQSPGPVVFSWGPLSLRWYGLLIGLAMVLGLLLARHLAARRGLPPSSMPDLLVWLVVGSLPLARLYYVAFEWERYR DGPWWQVLALWQGGIAIHGALIGGSAALYLFARRHRLSFWLLADCLVPSLSLGQGIGRWGNFFNNEAYGKVLPPDSPLWV QLQLPDGSRVHPTFLYESLWNFGLFGLLLFLSYRRQLPPGTLLGLYLVGYSLGRFWIEGLRTDSLMLGSLRVAQGVSLLL IGAGLAAILTAPKRVSVHPNEATSSPGIPAPKEL
Sequences:
>Translated_274_residues MTLVLQSPGPVVFSWGPLSLRWYGLLIGLAMVLGLLLARHLAARRGLPPSSMPDLLVWLVVGSLPLARLYYVAFEWERYR DGPWWQVLALWQGGIAIHGALIGGSAALYLFARRHRLSFWLLADCLVPSLSLGQGIGRWGNFFNNEAYGKVLPPDSPLWV QLQLPDGSRVHPTFLYESLWNFGLFGLLLFLSYRRQLPPGTLLGLYLVGYSLGRFWIEGLRTDSLMLGSLRVAQGVSLLL IGAGLAAILTAPKRVSVHPNEATSSPGIPAPKEL >Mature_273_residues TLVLQSPGPVVFSWGPLSLRWYGLLIGLAMVLGLLLARHLAARRGLPPSSMPDLLVWLVVGSLPLARLYYVAFEWERYRD GPWWQVLALWQGGIAIHGALIGGSAALYLFARRHRLSFWLLADCLVPSLSLGQGIGRWGNFFNNEAYGKVLPPDSPLWVQ LQLPDGSRVHPTFLYESLWNFGLFGLLLFLSYRRQLPPGTLLGLYLVGYSLGRFWIEGLRTDSLMLGSLRVAQGVSLLLI GAGLAAILTAPKRVSVHPNEATSSPGIPAPKEL
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=273, Percent_Identity=30.4029304029304, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30192; Mature: 30061
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVLQSPGPVVFSWGPLSLRWYGLLIGLAMVLGLLLARHLAARRGLPPSSMPDLLVWLV CEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VGSLPLARLYYVAFEWERYRDGPWWQVLALWQGGIAIHGALIGGSAALYLFARRHRLSFW HCCCHHHHHHHHEEEHHHCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHH LLADCLVPSLSLGQGIGRWGNFFNNEAYGKVLPPDSPLWVQLQLPDGSRVHPTFLYESLW HHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH NFGLFGLLLFLSYRRQLPPGTLLGLYLVGYSLGRFWIEGLRTDSLMLGSLRVAQGVSLLL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE IGAGLAAILTAPKRVSVHPNEATSSPGIPAPKEL HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TLVLQSPGPVVFSWGPLSLRWYGLLIGLAMVLGLLLARHLAARRGLPPSSMPDLLVWLV EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VGSLPLARLYYVAFEWERYRDGPWWQVLALWQGGIAIHGALIGGSAALYLFARRHRLSFW HCCCHHHHHHHHEEEHHHCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHH LLADCLVPSLSLGQGIGRWGNFFNNEAYGKVLPPDSPLWVQLQLPDGSRVHPTFLYESLW HHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH NFGLFGLLLFLSYRRQLPPGTLLGLYLVGYSLGRFWIEGLRTDSLMLGSLRVAQGVSLLL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE IGAGLAAILTAPKRVSVHPNEATSSPGIPAPKEL HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]