| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is yjeE [C]
Identifier: 86609409
GI number: 86609409
Start: 2055175
End: 2055810
Strand: Reverse
Name: yjeE [C]
Synonym: CYB_1959
Alternate gene names: 86609409
Gene position: 2055810-2055175 (Counterclockwise)
Preceding gene: 86609410
Following gene: 86609404
Centisome position: 67.48
GC content: 58.65
Gene sequence:
>636_bases ATGGCCAGCGAACAGAATGAAGAGCTCTGGCAGCAAGCCTCCCCTCTGCTGCTGCCATCCGCCGCTGCTACCCAATCACT AGGGGCCCTCGTAGCTCAAGCCGCCCTTGGCTTCCTCGCCCCTTCAGGTCAACAAAAATCTCCCCCTCCCAGCCGCAGCC TCGGCTCCACTTCCGGCTTGGTCATTCTTCTCGAAGGTAATCTGGGCAGCGGCAAAACCACCTTTGTGCAGGGACTAGGG CAGGGCTTGGGGATCCCTGAACCCATCGACAGCCCCACCTTCGTGCTGGTGCAGGAATACCACACCGGACGGATCCCTCT TTTCCATTGCGATCTCTACCGCCTAGAGACCTCTTCTGCCGCTCGCGCCGGTGGGAAAGAATTCACACTCCTAGAAGACC TAGGGCTAGAAGAACTTTGGAGCCAAGGTGGGATCACCGCTATTGAGTGGCCCCAGTACCTCCGCCATCTGCCTGCGACC TACCTCTGGCTGCGCCTACAGCCCCATCCCCAGCAGGAAGGAGCCCGCCTTCTACACGTCAAGGGAAAGGGATCCCAGAC TGGCCACCTTTGGCAGCAAGTTCTTTCTCAATTCACTCAGCAAAACCTCGAAGAAGGGATCCACTTCTCCTCCTGA
Upstream 100 bases:
>100_bases AGGCCTGGCCGCAATCTTGACAGCTCCCAAACGCGTTTCTGTTCACCCAAACGAGGCAACTTCCTCGCCTGGGATCCCCG CCCCAAAGGAGTTGTAAGCC
Downstream 100 bases:
>100_bases AAGTACTTGAAAGCAGAAGAAAAAGTTGAGATCCCAAAAGACTTATGGTCATTTCGATTCCAACTAGGACACTGCACCCG CGCCTAAAACGTTGAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MASEQNEELWQQASPLLLPSAAATQSLGALVAQAALGFLAPSGQQKSPPPSRSLGSTSGLVILLEGNLGSGKTTFVQGLG QGLGIPEPIDSPTFVLVQEYHTGRIPLFHCDLYRLETSSAARAGGKEFTLLEDLGLEELWSQGGITAIEWPQYLRHLPAT YLWLRLQPHPQQEGARLLHVKGKGSQTGHLWQQVLSQFTQQNLEEGIHFSS
Sequences:
>Translated_211_residues MASEQNEELWQQASPLLLPSAAATQSLGALVAQAALGFLAPSGQQKSPPPSRSLGSTSGLVILLEGNLGSGKTTFVQGLG QGLGIPEPIDSPTFVLVQEYHTGRIPLFHCDLYRLETSSAARAGGKEFTLLEDLGLEELWSQGGITAIEWPQYLRHLPAT YLWLRLQPHPQQEGARLLHVKGKGSQTGHLWQQVLSQFTQQNLEEGIHFSS >Mature_210_residues ASEQNEELWQQASPLLLPSAAATQSLGALVAQAALGFLAPSGQQKSPPPSRSLGSTSGLVILLEGNLGSGKTTFVQGLGQ GLGIPEPIDSPTFVLVQEYHTGRIPLFHCDLYRLETSSAARAGGKEFTLLEDLGLEELWSQGGITAIEWPQYLRHLPATY LWLRLQPHPQQEGARLLHVKGKGSQTGHLWQQVLSQFTQQNLEEGIHFSS
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=135, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 22886; Mature: 22755
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEQNEELWQQASPLLLPSAAATQSLGALVAQAALGFLAPSGQQKSPPPSRSLGSTSGL CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE VILLEGNLGSGKTTFVQGLGQGLGIPEPIDSPTFVLVQEYHTGRIPLFHCDLYRLETSSA EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECCEEEEECCHH ARAGGKEFTLLEDLGLEELWSQGGITAIEWPQYLRHLPATYLWLRLQPHPQQEGARLLHV HHCCCCCEEHHHHCCHHHHHHCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE KGKGSQTGHLWQQVLSQFTQQNLEEGIHFSS ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASEQNEELWQQASPLLLPSAAATQSLGALVAQAALGFLAPSGQQKSPPPSRSLGSTSGL CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE VILLEGNLGSGKTTFVQGLGQGLGIPEPIDSPTFVLVQEYHTGRIPLFHCDLYRLETSSA EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECCEEEEECCHH ARAGGKEFTLLEDLGLEELWSQGGITAIEWPQYLRHLPATYLWLRLQPHPQQEGARLLHV HHCCCCCEEHHHHCCHHHHHHCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE KGKGSQTGHLWQQVLSQFTQQNLEEGIHFSS ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9794762; 11759840 [H]