| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609388
Identifier: 86609388
GI number: 86609388
Start: 2018591
End: 2019751
Strand: Reverse
Name: 86609388
Synonym: CYB_1932
Alternate gene names: NA
Gene position: 2019751-2018591 (Counterclockwise)
Preceding gene: 86609390
Following gene: 86609386
Centisome position: 66.29
GC content: 57.88
Gene sequence:
>1161_bases GTGCAGATCCGCTTTGCTGTGGTGAGCGATCCCCACGTCACCCTCCCTTCCACCCTTTGGGATCACCCCAGCCGATTTCA CCTGGTAGAGGTGAGCATCCCGGCTCTGGAACAGGTTTTGCAGCATCTGGTGCAGTTGCCTCTGGATTTTCTGCTGTTGC CGGGGGATCTGACCCAGCATGGGGAGCCGGAAAACCATGCATGGCTGGCAGAGCGGCTGGCTCGACTGCCCTTTCCGGCT TTTGTGGTGCCCGGCAACCACGATGTGCCCCAGCCCGAGGCCAGCGGGCGCTCTATTGGTTTGGCGGATTTTCCCCGCTA CTACCGAGCTTTTGGCTACGAGGATGGGCAGTCTTTGGATTACAGCCGGGTTCTGCGGCCAGGGATCCGTTTGATCGGCC TCAATTCCAACCATTTTGATGCTCAGGGTCAATTGGTGGGGTGTCTAACCCCAGAACAACTGACCTGGCTGGAGAAAGAA TTGGCGGCAGCCGAGGAAGAGCTGGTGCTGCTGATGGTGCACCATAATGTGGTCGAGCATCTGCGCGGCCAGTCTCTCCA TCCCTGGGGGCGTCGCTACATGCTGGAGAATGCCTCTCAGTTGCGGCGGCTGCTGCAAGCTTATGGGGTGCAACTGGTGT TCACCGGACATCTGCACATCCAGCACATCGCCCGACGAGGGGGGGTTTACGACATTACCACCGGCTCTTTGGTCAGCTTT CCCCACCCCTACCGCCTTGTCGAGATCCGGTCGGATCGAGAGACCGGAATCCAAGTCCATATCCAGAGCTACCGGGTGGG ATCCCTGCCGGATTGGCCCGATTTGCAGGCGTTCTCGCGAGAATGGATGGCCCAGCGCAGTGAACCAGCGGTGGTTAAGT TTTTAACCTCCGCACCGCTGAATTTGCCTTTGGAACAGGCACAAGCCTTGGCCCCACAATTGCGCTACTTTTGGGCAGCG GTGGCTGCCGGGGATCCAGACCTCACTTTCCCAGACTTTCCCCAGCCAGCAGGCCGATTTCTGGAGCGTTTCAGCCGTTG CTTTCGCTGCCCGCCTGATAACCAGGCCCAGTTTCGTTTGATTTCGATTTTCTCTTTTCCAATTTCTAAGGATCCCCCCG AAGGGGGAACAAAAAAGTCTTCCTGGAAGGGAAGATCCTAA
Upstream 100 bases:
>100_bases ATAATCGGGATCCCGTGATGGATGTCAGAATAGCAGAAGCGCTTGCCCCCCCGGTGGGCCGAAGGCTTTGTCTGCTTGCT GTTGTCAAGGGGAGTAATCC
Downstream 100 bases:
>100_bases TCCCCAAGTTTCCAATTTCTAGGGATCCCCCCGAAGGGGGAACCTTGCAACACAGTCGGTCTACCCGAATTGGGTTAGAC TTGATCGTTTCCAATTTCTA
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MQIRFAVVSDPHVTLPSTLWDHPSRFHLVEVSIPALEQVLQHLVQLPLDFLLLPGDLTQHGEPENHAWLAERLARLPFPA FVVPGNHDVPQPEASGRSIGLADFPRYYRAFGYEDGQSLDYSRVLRPGIRLIGLNSNHFDAQGQLVGCLTPEQLTWLEKE LAAAEEELVLLMVHHNVVEHLRGQSLHPWGRRYMLENASQLRRLLQAYGVQLVFTGHLHIQHIARRGGVYDITTGSLVSF PHPYRLVEIRSDRETGIQVHIQSYRVGSLPDWPDLQAFSREWMAQRSEPAVVKFLTSAPLNLPLEQAQALAPQLRYFWAA VAAGDPDLTFPDFPQPAGRFLERFSRCFRCPPDNQAQFRLISIFSFPISKDPPEGGTKKSSWKGRS
Sequences:
>Translated_386_residues MQIRFAVVSDPHVTLPSTLWDHPSRFHLVEVSIPALEQVLQHLVQLPLDFLLLPGDLTQHGEPENHAWLAERLARLPFPA FVVPGNHDVPQPEASGRSIGLADFPRYYRAFGYEDGQSLDYSRVLRPGIRLIGLNSNHFDAQGQLVGCLTPEQLTWLEKE LAAAEEELVLLMVHHNVVEHLRGQSLHPWGRRYMLENASQLRRLLQAYGVQLVFTGHLHIQHIARRGGVYDITTGSLVSF PHPYRLVEIRSDRETGIQVHIQSYRVGSLPDWPDLQAFSREWMAQRSEPAVVKFLTSAPLNLPLEQAQALAPQLRYFWAA VAAGDPDLTFPDFPQPAGRFLERFSRCFRCPPDNQAQFRLISIFSFPISKDPPEGGTKKSSWKGRS >Mature_386_residues MQIRFAVVSDPHVTLPSTLWDHPSRFHLVEVSIPALEQVLQHLVQLPLDFLLLPGDLTQHGEPENHAWLAERLARLPFPA FVVPGNHDVPQPEASGRSIGLADFPRYYRAFGYEDGQSLDYSRVLRPGIRLIGLNSNHFDAQGQLVGCLTPEQLTWLEKE LAAAEEELVLLMVHHNVVEHLRGQSLHPWGRRYMLENASQLRRLLQAYGVQLVFTGHLHIQHIARRGGVYDITTGSLVSF PHPYRLVEIRSDRETGIQVHIQSYRVGSLPDWPDLQAFSREWMAQRSEPAVVKFLTSAPLNLPLEQAQALAPQLRYFWAA VAAGDPDLTFPDFPQPAGRFLERFSRCFRCPPDNQAQFRLISIFSFPISKDPPEGGTKKSSWKGRS
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43755; Mature: 43755
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRFAVVSDPHVTLPSTLWDHPSRFHLVEVSIPALEQVLQHLVQLPLDFLLLPGDLTQH CEEEEEEECCCCEECCHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCHHEEEECCCCCCC GEPENHAWLAERLARLPFPAFVVPGNHDVPQPEASGRSIGLADFPRYYRAFGYEDGQSLD CCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC YSRVLRPGIRLIGLNSNHFDAQGQLVGCLTPEQLTWLEKELAAAEEELVLLMVHHNVVEH HHHHHCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHEEEEEHHHHHHHH LRGQSLHPWGRRYMLENASQLRRLLQAYGVQLVFTGHLHIQHIARRGGVYDITTGSLVSF HCCCCCCHHHHHHHHHCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCEEEECCCCEECC PHPYRLVEIRSDRETGIQVHIQSYRVGSLPDWPDLQAFSREWMAQRSEPAVVKFLTSAPL CCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCC NLPLEQAQALAPQLRYFWAAVAAGDPDLTFPDFPQPAGRFLERFSRCFRCPPDNQAQFRL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE ISIFSFPISKDPPEGGTKKSSWKGRS EEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQIRFAVVSDPHVTLPSTLWDHPSRFHLVEVSIPALEQVLQHLVQLPLDFLLLPGDLTQH CEEEEEEECCCCEECCHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCHHEEEECCCCCCC GEPENHAWLAERLARLPFPAFVVPGNHDVPQPEASGRSIGLADFPRYYRAFGYEDGQSLD CCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC YSRVLRPGIRLIGLNSNHFDAQGQLVGCLTPEQLTWLEKELAAAEEELVLLMVHHNVVEH HHHHHCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHEEEEEHHHHHHHH LRGQSLHPWGRRYMLENASQLRRLLQAYGVQLVFTGHLHIQHIARRGGVYDITTGSLVSF HCCCCCCHHHHHHHHHCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCEEEECCCCEECC PHPYRLVEIRSDRETGIQVHIQSYRVGSLPDWPDLQAFSREWMAQRSEPAVVKFLTSAPL CCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHCCCC NLPLEQAQALAPQLRYFWAAVAAGDPDLTFPDFPQPAGRFLERFSRCFRCPPDNQAQFRL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE ISIFSFPISKDPPEGGTKKSSWKGRS EEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA