Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609291

Identifier: 86609291

GI number: 86609291

Start: 1924055

End: 1924738

Strand: Direct

Name: 86609291

Synonym: CYB_1835

Alternate gene names: NA

Gene position: 1924055-1924738 (Clockwise)

Preceding gene: 86609290

Following gene: 86609292

Centisome position: 63.15

GC content: 54.82

Gene sequence:

>684_bases
ATGACGACTGCCCCCATTGAGATACCTCTTCAGCCTGCCGCCCAACGGCATAACCACTACAGCCGCGAAGACTTTTTCCG
CTTTAATCTCTCCCAGGGATCCCTTGTGGACTGGACGGGCGCCCGCAATGTCTTGGTGAGCGAAGACTTTATTCTGGGCT
TGCAGCAGGGCCTGGAAGAAGAAGTGGGAGATGCCTCAGCTTCTCTGATGTACACCATTGGCCGAGAGTGGGGACGCAAC
GATGCTGTCCATTTTTCCCGCTGGTTTGAGGAGGAATATCGGCGCCACCCCAAGCAGAGTAATCTCATGTTTCTCTTGGA
AACCTGGTGGTGGCCTCTGACCTCGCAAGGATGGGGGCGCTGGGAGGTAGAAACCGAGAGTCGGCGGCAAGGGTTTATTT
TCATCAACCTCTTTGACTCCGCCGTGGCCCGCACCCTGGGGGATGTGGGCAAACCTGTCTGTCATCTTTACGCCGGATTG
TTTGCCGGCTTTTTTAGCACCATGGTGGAACGGCAGCTCAACTGCATCGAGATCCAGTGCTATTCTATGGGGGAAAGCTA
CTGCAAGTTTTTGCTCGGCAGCAAAGATCGCATTGATGCGGCTGCCTTCTGGCTGAACGAAGGGGCCAGTGCTGGTGAAA
TTGCCCAAAAATTGCGTTCAGGTCAGGGAGTAGCTAAGGCATGA

Upstream 100 bases:

>100_bases
CCTTGAGGACGAGGCTTTAGACCCAGTTTTTTGGTAAAAATGCCAATTAAGAAGGGTATGATAAGGAGTGTTAAAAAATC
TGATCTCTCCTCACCCAACC

Downstream 100 bases:

>100_bases
CCTGGAAGATTACTTTAGAGGATTCGGTGCAGAGCTTTTTTGCCCGTCTAAATTGGGATAACCGCCCCCTACAGATGCGC
TCTCTGCCAATGCCTTTTCT

Product: V4R domain-containing protein

Products: NA

Alternate protein names: 4-Vinyl Reductase 4VR; Bacteriochlorophyll 4-Vinyl Reductase

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTTAPIEIPLQPAAQRHNHYSREDFFRFNLSQGSLVDWTGARNVLVSEDFILGLQQGLEEEVGDASASLMYTIGREWGRN
DAVHFSRWFEEEYRRHPKQSNLMFLLETWWWPLTSQGWGRWEVETESRRQGFIFINLFDSAVARTLGDVGKPVCHLYAGL
FAGFFSTMVERQLNCIEIQCYSMGESYCKFLLGSKDRIDAAAFWLNEGASAGEIAQKLRSGQGVAKA

Sequences:

>Translated_227_residues
MTTAPIEIPLQPAAQRHNHYSREDFFRFNLSQGSLVDWTGARNVLVSEDFILGLQQGLEEEVGDASASLMYTIGREWGRN
DAVHFSRWFEEEYRRHPKQSNLMFLLETWWWPLTSQGWGRWEVETESRRQGFIFINLFDSAVARTLGDVGKPVCHLYAGL
FAGFFSTMVERQLNCIEIQCYSMGESYCKFLLGSKDRIDAAAFWLNEGASAGEIAQKLRSGQGVAKA
>Mature_226_residues
TTAPIEIPLQPAAQRHNHYSREDFFRFNLSQGSLVDWTGARNVLVSEDFILGLQQGLEEEVGDASASLMYTIGREWGRND
AVHFSRWFEEEYRRHPKQSNLMFLLETWWWPLTSQGWGRWEVETESRRQGFIFINLFDSAVARTLGDVGKPVCHLYAGLF
AGFFSTMVERQLNCIEIQCYSMGESYCKFLLGSKDRIDAAAFWLNEGASAGEIAQKLRSGQGVAKA

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25905; Mature: 25774

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAPIEIPLQPAAQRHNHYSREDFFRFNLSQGSLVDWTGARNVLVSEDFILGLQQGLEE
CCCCCCCCCCCCHHHHCCCCCCCHHEEEECCCCCEEECCCCCCEEECHHHHHHHHHHHHH
EVGDASASLMYTIGREWGRNDAVHFSRWFEEEYRRHPKQSNLMFLLETWWWPLTSQGWGR
HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCE
WEVETESRRQGFIFINLFDSAVARTLGDVGKPVCHLYAGLFAGFFSTMVERQLNCIEIQC
EEECCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YSMGESYCKFLLGSKDRIDAAAFWLNEGASAGEIAQKLRSGQGVAKA
ECCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTAPIEIPLQPAAQRHNHYSREDFFRFNLSQGSLVDWTGARNVLVSEDFILGLQQGLEE
CCCCCCCCCCCHHHHCCCCCCCHHEEEECCCCCEEECCCCCCEEECHHHHHHHHHHHHH
EVGDASASLMYTIGREWGRNDAVHFSRWFEEEYRRHPKQSNLMFLLETWWWPLTSQGWGR
HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCE
WEVETESRRQGFIFINLFDSAVARTLGDVGKPVCHLYAGLFAGFFSTMVERQLNCIEIQC
EEECCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YSMGESYCKFLLGSKDRIDAAAFWLNEGASAGEIAQKLRSGQGVAKA
ECCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA