| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is gvpN [H]
Identifier: 86609286
GI number: 86609286
Start: 1920618
End: 1921502
Strand: Reverse
Name: gvpN [H]
Synonym: CYB_1830
Alternate gene names: 86609286
Gene position: 1921502-1920618 (Counterclockwise)
Preceding gene: 86609287
Following gene: 86609285
Centisome position: 63.07
GC content: 59.32
Gene sequence:
>885_bases ATGGCCACAGTTCTGCAGGCGCGTCCCCGCCAGTTCGTGAACACCCCCTACATTGAGCGGATTACCCGCCGCGCTTTGCG CTATTTGCAATCGGGCTTTGCGGTGCATTTGCGGGGGCCTTCGGGTACGGGCAAAACCACTTTGGCGATGCATCTGGCCA GCCTGCTGGGCCGCCCCATCATGCTGATCTACGGGGATGACCGCTTCGATTCTTCCGACCTCATCGGGGGGCGCACCGGT TTTACCCATCGGCGGGTGGTGGACAACTTCATTCACTCGGTGGTGAAGACGGAGGAGGATGTGCAGCAGCGCTGGGTGGA TGCCCGCCTCACCTTGGCTTGCCGAGAGGGGTTTACCCTCATCTACGACGAGTTCAATCGCTCCCGCCCTGAGGCCAACA ATGCTCTCCTGAGTGCCTTGGAGGAGAGGCTGCTGGTGTTGCCGCCGGACAGCAACCGCTCGGAATATCTGCGGGTGCAT CCCCAGTTCCGGGCCATTTTTACCTCTAACCCGGAGGAATATACCGGGGTTCACAGGGCCCAAGATGCGCTGCTGGATCG GATGATCACCATCGATATGGGGGAGCCGGACATCGAGACCGAAAAGGAGATTCTCACCTCGCGAATAGGCTTATCCGGCC CCGACGCCCTCAAGATCGTCCACATTGTGCGGGCTTTTCGCCGCAAGTTGGATCTGACGCGCCACCCCAGCCTGCGCAGT TGTTTGATGATCGGGCGCATTGTCAAGGAACATGAGCTGGCAGTTAGCAAAGAGAATGCCGATTTTCGCGCTTTGTGTGC GGATGTGCTGTTGCCCCGGGCTGGCAAGCGCTATGAAGAGGGATCCCAGCTGCTGAATTATCTGCTAGACCAACTGCCTG GCTGA
Upstream 100 bases:
>100_bases TCGGGGACGGTCGCAGTTTAGTTGAACAGAGCGCAGGAAGAACATCCGAGCTATAGTCAAGGCAAAAGAGTCCAGGGCAG CAAAGAGGTTGGGTATCTCT
Downstream 100 bases:
>100_bases GTCTTTTGCCTGTTGGTACACTTTGGAGGTCGATGAACTCTGTGCCGATTAGCTCTCAACCCTTGACCACGGCTACTCAC GGCTCCTCGCTGGCCGATGT
Product: gas vesicle protein GvpN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MATVLQARPRQFVNTPYIERITRRALRYLQSGFAVHLRGPSGTGKTTLAMHLASLLGRPIMLIYGDDRFDSSDLIGGRTG FTHRRVVDNFIHSVVKTEEDVQQRWVDARLTLACREGFTLIYDEFNRSRPEANNALLSALEERLLVLPPDSNRSEYLRVH PQFRAIFTSNPEEYTGVHRAQDALLDRMITIDMGEPDIETEKEILTSRIGLSGPDALKIVHIVRAFRRKLDLTRHPSLRS CLMIGRIVKEHELAVSKENADFRALCADVLLPRAGKRYEEGSQLLNYLLDQLPG
Sequences:
>Translated_294_residues MATVLQARPRQFVNTPYIERITRRALRYLQSGFAVHLRGPSGTGKTTLAMHLASLLGRPIMLIYGDDRFDSSDLIGGRTG FTHRRVVDNFIHSVVKTEEDVQQRWVDARLTLACREGFTLIYDEFNRSRPEANNALLSALEERLLVLPPDSNRSEYLRVH PQFRAIFTSNPEEYTGVHRAQDALLDRMITIDMGEPDIETEKEILTSRIGLSGPDALKIVHIVRAFRRKLDLTRHPSLRS CLMIGRIVKEHELAVSKENADFRALCADVLLPRAGKRYEEGSQLLNYLLDQLPG >Mature_293_residues ATVLQARPRQFVNTPYIERITRRALRYLQSGFAVHLRGPSGTGKTTLAMHLASLLGRPIMLIYGDDRFDSSDLIGGRTGF THRRVVDNFIHSVVKTEEDVQQRWVDARLTLACREGFTLIYDEFNRSRPEANNALLSALEERLLVLPPDSNRSEYLRVHP QFRAIFTSNPEEYTGVHRAQDALLDRMITIDMGEPDIETEKEILTSRIGLSGPDALKIVHIVRAFRRKLDLTRHPSLRSC LMIGRIVKEHELAVSKENADFRALCADVLLPRAGKRYEEGSQLLNYLLDQLPG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Vacuole, gas vesicle [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR013462 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 33461; Mature: 33330
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVLQARPRQFVNTPYIERITRRALRYLQSGFAVHLRGPSGTGKTTLAMHLASLLGRPI CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE MLIYGDDRFDSSDLIGGRTGFTHRRVVDNFIHSVVKTEEDVQQRWVDARLTLACREGFTL EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEE IYDEFNRSRPEANNALLSALEERLLVLPPDSNRSEYLRVHPQFRAIFTSNPEEYTGVHRA EEHHHCCCCCCHHHHHHHHHHHCEEEECCCCCCCCEEEECCCEEEEECCCCHHHHHHHHH QDALLDRMITIDMGEPDIETEKEILTSRIGLSGPDALKIVHIVRAFRRKLDLTRHPSLRS HHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH CLMIGRIVKEHELAVSKENADFRALCADVLLPRAGKRYEEGSQLLNYLLDQLPG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATVLQARPRQFVNTPYIERITRRALRYLQSGFAVHLRGPSGTGKTTLAMHLASLLGRPI CCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE MLIYGDDRFDSSDLIGGRTGFTHRRVVDNFIHSVVKTEEDVQQRWVDARLTLACREGFTL EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEE IYDEFNRSRPEANNALLSALEERLLVLPPDSNRSEYLRVHPQFRAIFTSNPEEYTGVHRA EEHHHCCCCCCHHHHHHHHHHHCEEEECCCCCCCCEEEECCCEEEEECCCCHHHHHHHHH QDALLDRMITIDMGEPDIETEKEILTSRIGLSGPDALKIVHIVRAFRRKLDLTRHPSLRS HHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH CLMIGRIVKEHELAVSKENADFRALCADVLLPRAGKRYEEGSQLLNYLLDQLPG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9063646 [H]