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The map label for this gene is gvpJ [H]

Identifier: 86609285

GI number: 86609285

Start: 1920241

End: 1920576

Strand: Reverse

Name: gvpJ [H]

Synonym: CYB_1829

Alternate gene names: 86609285

Gene position: 1920576-1920241 (Counterclockwise)

Preceding gene: 86609286

Following gene: 86609284

Centisome position: 63.04

GC content: 58.93

Gene sequence:

>336_bases
GTGCCGATTAGCTCTCAACCCTTGACCACGGCTACTCACGGCTCCTCGCTGGCCGATGTGTTGGAGCGGGTGCTGGACAA
GGGCATTGTGATCGCCGGAGACATCACCGTTTCGGTGGGCAATGTGGAGTTGCTGAATGTGCGCATTCGCCTGCTGATTT
CTTCGGTGGATAAGGCCAAGGAGATCGGCATCAATTGGTGGGAGTCGGATCCCTATCTCAACAGCCAGGCGCGGGAGCTG
CTGGAAGCCAACCGACAGCTCATGCAGCGCGTTGCCGAATTGGAAAGACAGCTTGCCCAAGCTCTGCCCCAGGGGGGAAA
GGGAACGGACCCATAG

Upstream 100 bases:

>100_bases
AGCGCTATGAAGAGGGATCCCAGCTGCTGAATTATCTGCTAGACCAACTGCCTGGCTGAGTCTTTTGCCTGTTGGTACAC
TTTGGAGGTCGATGAACTCT

Downstream 100 bases:

>100_bases
GCTGCCCCCCGCCATTGTGACCTGGATTGACGGGCTAGACTGGCTGCTGGGGTGGTTTGACGGGGTGATGGGGCATGGCT
TTGGAGATGGCGTTTGACCG

Product: gas vesicle protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPISSQPLTTATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLISSVDKAKEIGINWWESDPYLNSQAREL
LEANRQLMQRVAELERQLAQALPQGGKGTDP

Sequences:

>Translated_111_residues
MPISSQPLTTATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLISSVDKAKEIGINWWESDPYLNSQAREL
LEANRQLMQRVAELERQLAQALPQGGKGTDP
>Mature_110_residues
PISSQPLTTATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLISSVDKAKEIGINWWESDPYLNSQARELL
EANRQLMQRVAELERQLAQALPQGGKGTDP

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 12116; Mature: 11985

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISSQPLTTATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLISSVDKAK
CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEECCEEHHHHHHHHHHHHHHHHH
EIGINWWESDPYLNSQARELLEANRQLMQRVAELERQLAQALPQGGKGTDP
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PISSQPLTTATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLISSVDKAK
CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEECCEEHHHHHHHHHHHHHHHHH
EIGINWWESDPYLNSQARELLEANRQLMQRVAELERQLAQALPQGGKGTDP
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA