Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609212

Identifier: 86609212

GI number: 86609212

Start: 1837181

End: 1839013

Strand: Direct

Name: 86609212

Synonym: CYB_1754

Alternate gene names: NA

Gene position: 1837181-1839013 (Clockwise)

Preceding gene: 86609211

Following gene: 86609218

Centisome position: 60.3

GC content: 63.56

Gene sequence:

>1833_bases
ATGGGGTTTGCCGCCCTCTCCCAGCCAGAGGTGGGATCCCCTGTTGCCGTCTCCGAGCCGGAGGTGCCCCGTTTTACCGC
CCACGGTTGGCCCTTGTTGGATCCCTTGCCGCAGCCGGACGAGATTTGGGAGTGCGAGCTGGTGGTGGTGGGCGGATCCC
TGGGAGGGGTGGCAGCGGCAGGCCATGCCATGCGAGGGGGGGTGCAGACCTGTCTCATCGAGCTCACCCCTTGGCTGGGG
GGGCAGATCACCTCCCAGGGGGTATCGGCCATTGATGAATCGCTGCCAATGCGGCAACGGGGCAATTTTTCCCGCCACTG
GCTGGAGTTCAAGGCCTTGATCGAAAGCCAGCCGGTGCATCTGCCGGCCTGGACAGGGATCCCGCCGGGAACCCGCGTAT
CCGAGATCAACAGCTGCTGGGTGGGAGGGCTGTGTTTTCCGCCTCAGGCGGGGCTGCAGGCGGTGGAAACCTGGCTGCAA
CAGGCAGCTCAAAATGCCCCCAACAGCCGCTGGGCTACCCAAACGGCTTTTAAGGGGGCCACCTTCAGCGCCGATGGATC
CCAGATTGAAAGCATTTACGCTGTGCAGCGGCAACCCCGGGATCCCAACTTTGTGCCGCCGGGACGGCTGTGGCGGGAGC
TGGTGAGCTGGTACAGTTGGCAGGAAACGGAGGTGTTCGCCAAGCGAGTGCTGCGTCTACAAGCGCCGCCGGGCCGCCCA
TTCTTCGTGATCGATGCCACCGATACCGGAGAGCTGGTGGGCTGGGCCGGGATCCCCTATCGGCTGGGTTCGGAAGGGCA
CGATGTGACCGGCGAGCCCAATGCCGCCCCCGCCAGCAACCCGGAGTGCACTCAAGCCTTTACCTTTCCCTTCGTGCTGG
CCATCCACGACGATGGCGGTCGCTCCCGCGCCGAGCTGGCCCAACTGCAACCAGGCTATTCCCGCGCCGAACACCGCCGC
GAGTTCGACATGGAAGGTTTCCCCACCTTCAGCGGCCAGAGCTTTTTCAATTACCGCCGCATCGTCAGCAAGGGTCGCCG
GGATCCCTTCTACAGCACGCCTGTTCCAGGCGACCTGACGCTGGTGAACTGGAACCGCGGCAACGACTGGGGGATCATGA
ACCCGCCCCTGATCCTGACGGAAGAGCGGCTGGTGGCCTCGGGGCAGCGCCACAACTGGCTGGGGGGCCTGGATGTCTCG
GCCATCAAAGATGGAGAAAACCACGCCCTGCTGTTTGCCGAGTGGCTGATGGAAACCCAATCCCGCAGCGGCTATCCCCT
GTCCTTGGTGTTTGCCGAAGAGTCCTTGCTGGGCACCCGCTCCGGCCTTAGCCTCTACCCCTACATCCGCGAAGGTCGGC
GCATCCTGGGGCGAGCTGCCTACGGCCAAGCAGAGTTCCTGATGTTGGAGCAGGATATTCGCGTCGGCACCGCCGGGGGG
CGGGACTTCAGACCTACCGTGGTGGGGGTTACCCACTACGCCATCGATATCCACGGCTGTCGCTACCGCAACTGGGAGCC
CTCTCTTTCGGCCAGCTCCGCGCCAGTCAACGAGTTTTCCGTCCGTCCCATTCTCATTCCCTTGGAAGCCCTGATCCCGC
AGAAGGTGGATAACCTGCTCATCGGCGGCAAAGGGATCGCCGTCAGCCACATTGTCAACGCCGCCACCCGCGTGCATTAC
GGTGAATGGACCATCGGCTCGGCGGTAGGGCTGACCGTGGCTTGGCTGCACAGCCAGGATCCCAGCTTGACCCCAGCTCA
GATCGTGCCGCAAGGCAAAATGGCCGATTTACAACGCTACCTGATCTCCCATGGGCAAAGACTGCAATGGTGA

Upstream 100 bases:

>100_bases
GAGCATGGCTGGCAAAAAGACGGCTGCGGCGTGCCGGGGATCTGAGCCCAAGCGAACTGTGGGGCTGGGGATCCTGTCGC
TGCTGAGCTTTGTGGCCGGG

Downstream 100 bases:

>100_bases
ACCCAGAGGACACCGTCTCAGCGCGAACGACAGATCCCCACCCAATCGACCCAATTTTTCCGATATCGGGGCCCTAGGTT
GTGTTGATCTTTCATTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MGFAALSQPEVGSPVAVSEPEVPRFTAHGWPLLDPLPQPDEIWECELVVVGGSLGGVAAAGHAMRGGVQTCLIELTPWLG
GQITSQGVSAIDESLPMRQRGNFSRHWLEFKALIESQPVHLPAWTGIPPGTRVSEINSCWVGGLCFPPQAGLQAVETWLQ
QAAQNAPNSRWATQTAFKGATFSADGSQIESIYAVQRQPRDPNFVPPGRLWRELVSWYSWQETEVFAKRVLRLQAPPGRP
FFVIDATDTGELVGWAGIPYRLGSEGHDVTGEPNAAPASNPECTQAFTFPFVLAIHDDGGRSRAELAQLQPGYSRAEHRR
EFDMEGFPTFSGQSFFNYRRIVSKGRRDPFYSTPVPGDLTLVNWNRGNDWGIMNPPLILTEERLVASGQRHNWLGGLDVS
AIKDGENHALLFAEWLMETQSRSGYPLSLVFAEESLLGTRSGLSLYPYIREGRRILGRAAYGQAEFLMLEQDIRVGTAGG
RDFRPTVVGVTHYAIDIHGCRYRNWEPSLSASSAPVNEFSVRPILIPLEALIPQKVDNLLIGGKGIAVSHIVNAATRVHY
GEWTIGSAVGLTVAWLHSQDPSLTPAQIVPQGKMADLQRYLISHGQRLQW

Sequences:

>Translated_610_residues
MGFAALSQPEVGSPVAVSEPEVPRFTAHGWPLLDPLPQPDEIWECELVVVGGSLGGVAAAGHAMRGGVQTCLIELTPWLG
GQITSQGVSAIDESLPMRQRGNFSRHWLEFKALIESQPVHLPAWTGIPPGTRVSEINSCWVGGLCFPPQAGLQAVETWLQ
QAAQNAPNSRWATQTAFKGATFSADGSQIESIYAVQRQPRDPNFVPPGRLWRELVSWYSWQETEVFAKRVLRLQAPPGRP
FFVIDATDTGELVGWAGIPYRLGSEGHDVTGEPNAAPASNPECTQAFTFPFVLAIHDDGGRSRAELAQLQPGYSRAEHRR
EFDMEGFPTFSGQSFFNYRRIVSKGRRDPFYSTPVPGDLTLVNWNRGNDWGIMNPPLILTEERLVASGQRHNWLGGLDVS
AIKDGENHALLFAEWLMETQSRSGYPLSLVFAEESLLGTRSGLSLYPYIREGRRILGRAAYGQAEFLMLEQDIRVGTAGG
RDFRPTVVGVTHYAIDIHGCRYRNWEPSLSASSAPVNEFSVRPILIPLEALIPQKVDNLLIGGKGIAVSHIVNAATRVHY
GEWTIGSAVGLTVAWLHSQDPSLTPAQIVPQGKMADLQRYLISHGQRLQW
>Mature_609_residues
GFAALSQPEVGSPVAVSEPEVPRFTAHGWPLLDPLPQPDEIWECELVVVGGSLGGVAAAGHAMRGGVQTCLIELTPWLGG
QITSQGVSAIDESLPMRQRGNFSRHWLEFKALIESQPVHLPAWTGIPPGTRVSEINSCWVGGLCFPPQAGLQAVETWLQQ
AAQNAPNSRWATQTAFKGATFSADGSQIESIYAVQRQPRDPNFVPPGRLWRELVSWYSWQETEVFAKRVLRLQAPPGRPF
FVIDATDTGELVGWAGIPYRLGSEGHDVTGEPNAAPASNPECTQAFTFPFVLAIHDDGGRSRAELAQLQPGYSRAEHRRE
FDMEGFPTFSGQSFFNYRRIVSKGRRDPFYSTPVPGDLTLVNWNRGNDWGIMNPPLILTEERLVASGQRHNWLGGLDVSA
IKDGENHALLFAEWLMETQSRSGYPLSLVFAEESLLGTRSGLSLYPYIREGRRILGRAAYGQAEFLMLEQDIRVGTAGGR
DFRPTVVGVTHYAIDIHGCRYRNWEPSLSASSAPVNEFSVRPILIPLEALIPQKVDNLLIGGKGIAVSHIVNAATRVHYG
EWTIGSAVGLTVAWLHSQDPSLTPAQIVPQGKMADLQRYLISHGQRLQW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67122; Mature: 66990

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFAALSQPEVGSPVAVSEPEVPRFTAHGWPLLDPLPQPDEIWECELVVVGGSLGGVAAA
CCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
GHAMRGGVQTCLIELTPWLGGQITSQGVSAIDESLPMRQRGNFSRHWLEFKALIESQPVH
CHHHHCCHHEEEEEECCCCCCEEHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCC
LPAWTGIPPGTRVSEINSCWVGGLCFPPQAGLQAVETWLQQAAQNAPNSRWATQTAFKGA
CCCCCCCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
TFSADGSQIESIYAVQRQPRDPNFVPPGRLWRELVSWYSWQETEVFAKRVLRLQAPPGRP
EECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCE
FFVIDATDTGELVGWAGIPYRLGSEGHDVTGEPNAAPASNPECTQAFTFPFVLAIHDDGG
EEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEECCCC
RSRAELAQLQPGYSRAEHRREFDMEGFPTFSGQSFFNYRRIVSKGRRDPFYSTPVPGDLT
CCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
LVNWNRGNDWGIMNPPLILTEERLVASGQRHNWLGGLDVSAIKDGENHALLFAEWLMETQ
EEECCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHH
SRSGYPLSLVFAEESLLGTRSGLSLYPYIREGRRILGRAAYGQAEFLMLEQDIRVGTAGG
CCCCCCEEEEEECCHHHCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCC
RDFRPTVVGVTHYAIDIHGCRYRNWEPSLSASSAPVNEFSVRPILIPLEALIPQKVDNLL
CCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEE
IGGKGIAVSHIVNAATRVHYGEWTIGSAVGLTVAWLHSQDPSLTPAQIVPQGKMADLQRY
ECCCCHHHHHHHHHHHHEECCCEECCCHHCEEEEEEECCCCCCCHHHCCCCCCHHHHHHH
LISHGQRLQW
HHHCCCCCCC
>Mature Secondary Structure 
GFAALSQPEVGSPVAVSEPEVPRFTAHGWPLLDPLPQPDEIWECELVVVGGSLGGVAAA
CCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
GHAMRGGVQTCLIELTPWLGGQITSQGVSAIDESLPMRQRGNFSRHWLEFKALIESQPVH
CHHHHCCHHEEEEEECCCCCCEEHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCC
LPAWTGIPPGTRVSEINSCWVGGLCFPPQAGLQAVETWLQQAAQNAPNSRWATQTAFKGA
CCCCCCCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
TFSADGSQIESIYAVQRQPRDPNFVPPGRLWRELVSWYSWQETEVFAKRVLRLQAPPGRP
EECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCE
FFVIDATDTGELVGWAGIPYRLGSEGHDVTGEPNAAPASNPECTQAFTFPFVLAIHDDGG
EEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEECCCC
RSRAELAQLQPGYSRAEHRREFDMEGFPTFSGQSFFNYRRIVSKGRRDPFYSTPVPGDLT
CCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
LVNWNRGNDWGIMNPPLILTEERLVASGQRHNWLGGLDVSAIKDGENHALLFAEWLMETQ
EEECCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHH
SRSGYPLSLVFAEESLLGTRSGLSLYPYIREGRRILGRAAYGQAEFLMLEQDIRVGTAGG
CCCCCCEEEEEECCHHHCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCC
RDFRPTVVGVTHYAIDIHGCRYRNWEPSLSASSAPVNEFSVRPILIPLEALIPQKVDNLL
CCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEE
IGGKGIAVSHIVNAATRVHYGEWTIGSAVGLTVAWLHSQDPSLTPAQIVPQGKMADLQRY
ECCCCHHHHHHHHHHHHEECCCEECCCHHCEEEEEEECCCCCCCHHHCCCCCCHHHHHHH
LISHGQRLQW
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA