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The map label for this gene is ylbH [H]

Identifier: 86609190

GI number: 86609190

Start: 1814789

End: 1815340

Strand: Direct

Name: ylbH [H]

Synonym: CYB_1733

Alternate gene names: 86609190

Gene position: 1814789-1815340 (Clockwise)

Preceding gene: 86609189

Following gene: 86609193

Centisome position: 59.57

GC content: 62.5

Gene sequence:

>552_bases
ATGAGCCTGCGCATCAGCGGCAAACGAGCGCTGCAAACTCCCGCTGGCTTGGGCACTCGACCCACCCCTGGCCGGGTGAG
GCAGGCCTTGTTCAACATCTTGCAAGGGCAGGTGGAAGGCTGTCGCTGGCTGGATCTGTGCTGTGGGGCCGGTACGGTGG
GAGCAGAAGCTCTGTGTCAGGGGGCCGCTTTTGTGGCCGGGATCGAGATTGCCGCCCCTGCCTGCCGCATCATCCGAGCC
AACTGGGCCAAGGTGGCGCAGCTGGGGCAATCTTTCCAGGTCATTCAGGGAGATGCCCGCAAGCTGCTCAGCCGCGGCCT
GAACTTGGAGCCATTTGATTACGTGTACTTTGCTCCTCCCTACGAGGCCGGTCTGTACGCCCCGCTCCTGCCCCTGATCC
CGCCCTTGCTCAAGCCAGGCGGAACCTTGATCGTCGAGCATCGCAGCGGCCAGAAGCTACCAGACCAGGTGGGATCCCTG
CTGCGCTTTGACCAACGAACCTATGGGCAAACGGCGCTGGCTTTCTATCGCAATCTGGAAGAGCAGCTCTAG

Upstream 100 bases:

>100_bases
ACCTTTGGTGGAGCAAATCCAGATGGAGCGGGATCGCGCCGCCCAGCGCAGTGGGTTGACCGGCCAGTTGCCGGCTGCAC
CTAACCCCTGAAGGGATCCC

Downstream 100 bases:

>100_bases
CTGGGGAAGGGAGTGCTGACGAAGCCGATTTCCAAGAGCTGCTGGTAGGCTTGGGTGCCCAGCTCGCGGGTTGGGCTCTG
GCTGTTGATGACCTGGATCA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSLRISGKRALQTPAGLGTRPTPGRVRQALFNILQGQVEGCRWLDLCCGAGTVGAEALCQGAAFVAGIEIAAPACRIIRA
NWAKVAQLGQSFQVIQGDARKLLSRGLNLEPFDYVYFAPPYEAGLYAPLLPLIPPLLKPGGTLIVEHRSGQKLPDQVGSL
LRFDQRTYGQTALAFYRNLEEQL

Sequences:

>Translated_183_residues
MSLRISGKRALQTPAGLGTRPTPGRVRQALFNILQGQVEGCRWLDLCCGAGTVGAEALCQGAAFVAGIEIAAPACRIIRA
NWAKVAQLGQSFQVIQGDARKLLSRGLNLEPFDYVYFAPPYEAGLYAPLLPLIPPLLKPGGTLIVEHRSGQKLPDQVGSL
LRFDQRTYGQTALAFYRNLEEQL
>Mature_182_residues
SLRISGKRALQTPAGLGTRPTPGRVRQALFNILQGQVEGCRWLDLCCGAGTVGAEALCQGAAFVAGIEIAAPACRIIRAN
WAKVAQLGQSFQVIQGDARKLLSRGLNLEPFDYVYFAPPYEAGLYAPLLPLIPPLLKPGGTLIVEHRSGQKLPDQVGSLL
RFDQRTYGQTALAFYRNLEEQL

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 19849; Mature: 19718

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRISGKRALQTPAGLGTRPTPGRVRQALFNILQGQVEGCRWLDLCCGAGTVGAEALCQ
CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
GAAFVAGIEIAAPACRIIRANWAKVAQLGQSFQVIQGDARKLLSRGLNLEPFDYVYFAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
YEAGLYAPLLPLIPPLLKPGGTLIVEHRSGQKLPDQVGSLLRFDQRTYGQTALAFYRNLE
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQL
HCC
>Mature Secondary Structure 
SLRISGKRALQTPAGLGTRPTPGRVRQALFNILQGQVEGCRWLDLCCGAGTVGAEALCQ
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
GAAFVAGIEIAAPACRIIRANWAKVAQLGQSFQVIQGDARKLLSRGLNLEPFDYVYFAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
YEAGLYAPLLPLIPPLLKPGGTLIVEHRSGQKLPDQVGSLLRFDQRTYGQTALAFYRNLE
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]