Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609189

Identifier: 86609189

GI number: 86609189

Start: 1813907

End: 1814779

Strand: Direct

Name: 86609189

Synonym: CYB_1731

Alternate gene names: NA

Gene position: 1813907-1814779 (Clockwise)

Preceding gene: 86609188

Following gene: 86609190

Centisome position: 59.54

GC content: 60.14

Gene sequence:

>873_bases
ATGAGCAGGCTGGGCAAACTGCTGGGGGTGATTTGTTGGGTGTGGGGATCCGCTCTGCCCGTTTGGGCGCAGGATCCCTT
CCGCAGCGGGGACAATGCCCGCCCCATCAGGCCGGAGGTGGCGGCAGCTTTTGAAGAGTTCTTCTGTGCAGGCCGCTACA
GCCAGAGCCGGGAAAAACTGGAAATGGCCAAGAAGGCCTCCCCCGAAGAGCCGATGGTCTATGCCCTGTTGGCGGCGCTG
GCTTATCAGGAGGGAGACCTGGAAGCATTTGCCCAGTTGGCCACTCAAACCCGACAGGTGGCCGCCGAGTTGAAAAAGAC
GGATCCCTTGCGTGGCAACCTTTATGAGGGCGTGGGCTACGGGCTAGAGGCAGCCAACATTGTGGTGCGAGATGGGGTGG
TCATCGGTTTGCCCAAGGCTCTGCCCACCCTCAATCAATTGTTTGCCTCCATCCGGGCCGCCCAAGCAGTGGACAGCAGC
GATCCGGAGCTCAATCTGCTCAACGGCTACATGGATTTGCTGCTGACCTACCGGGAGAAGGCTCTGAATCAGTTTCGGAT
GGCAGCGCCTGACTATCTGTCCTACCGCGGCCAAGCTCTGGCCTACCGGGATATGCAGCGCTTTGACGAGGCATTGGAGG
CGGTAGATCGGGCCATTGCTGCTTCCTGCAACAACCCGGAGCTCTATTACCTCAAGGCGCAAATTTTGGTTTCCAAAGGG
CAAGACCGAGAGGCCGTCCCCCTTTTCGATCAAGCCCTGCAAGCTTCCGCCCAACTGCCCCAACCTTTGGTGGAGCAAAT
CCAGATGGAGCGGGATCGCGCCGCCCAGCGCAGTGGGTTGACCGGCCAGTTGCCGGCTGCACCTAACCCCTGA

Upstream 100 bases:

>100_bases
GGTTCAAGATGCCGCTATTGCTTCGATTGCCCAACTGCTGCGCTGAAGAGAGGGTTAGATGGGGGTGGGAGTTGAGGCAC
TGGGGATGAGTATCGGCAAA

Downstream 100 bases:

>100_bases
AGGGATCCCATGAGCCTGCGCATCAGCGGCAAACGAGCGCTGCAAACTCCCGCTGGCTTGGGCACTCGACCCACCCCTGG
CCGGGTGAGGCAGGCCTTGT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Domain Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSRLGKLLGVICWVWGSALPVWAQDPFRSGDNARPIRPEVAAAFEEFFCAGRYSQSREKLEMAKKASPEEPMVYALLAAL
AYQEGDLEAFAQLATQTRQVAAELKKTDPLRGNLYEGVGYGLEAANIVVRDGVVIGLPKALPTLNQLFASIRAAQAVDSS
DPELNLLNGYMDLLLTYREKALNQFRMAAPDYLSYRGQALAYRDMQRFDEALEAVDRAIAASCNNPELYYLKAQILVSKG
QDREAVPLFDQALQASAQLPQPLVEQIQMERDRAAQRSGLTGQLPAAPNP

Sequences:

>Translated_290_residues
MSRLGKLLGVICWVWGSALPVWAQDPFRSGDNARPIRPEVAAAFEEFFCAGRYSQSREKLEMAKKASPEEPMVYALLAAL
AYQEGDLEAFAQLATQTRQVAAELKKTDPLRGNLYEGVGYGLEAANIVVRDGVVIGLPKALPTLNQLFASIRAAQAVDSS
DPELNLLNGYMDLLLTYREKALNQFRMAAPDYLSYRGQALAYRDMQRFDEALEAVDRAIAASCNNPELYYLKAQILVSKG
QDREAVPLFDQALQASAQLPQPLVEQIQMERDRAAQRSGLTGQLPAAPNP
>Mature_289_residues
SRLGKLLGVICWVWGSALPVWAQDPFRSGDNARPIRPEVAAAFEEFFCAGRYSQSREKLEMAKKASPEEPMVYALLAALA
YQEGDLEAFAQLATQTRQVAAELKKTDPLRGNLYEGVGYGLEAANIVVRDGVVIGLPKALPTLNQLFASIRAAQAVDSSD
PELNLLNGYMDLLLTYREKALNQFRMAAPDYLSYRGQALAYRDMQRFDEALEAVDRAIAASCNNPELYYLKAQILVSKGQ
DREAVPLFDQALQASAQLPQPLVEQIQMERDRAAQRSGLTGQLPAAPNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31983; Mature: 31852

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLGKLLGVICWVWGSALPVWAQDPFRSGDNARPIRPEVAAAFEEFFCAGRYSQSREKL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
EMAKKASPEEPMVYALLAALAYQEGDLEAFAQLATQTRQVAAELKKTDPLRGNLYEGVGY
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
GLEAANIVVRDGVVIGLPKALPTLNQLFASIRAAQAVDSSDPELNLLNGYMDLLLTYREK
CCHHHHEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ALNQFRMAAPDYLSYRGQALAYRDMQRFDEALEAVDRAIAASCNNPELYYLKAQILVSKG
HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHEECC
QDREAVPLFDQALQASAQLPQPLVEQIQMERDRAAQRSGLTGQLPAAPNP
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLGKLLGVICWVWGSALPVWAQDPFRSGDNARPIRPEVAAAFEEFFCAGRYSQSREKL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
EMAKKASPEEPMVYALLAALAYQEGDLEAFAQLATQTRQVAAELKKTDPLRGNLYEGVGY
HHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
GLEAANIVVRDGVVIGLPKALPTLNQLFASIRAAQAVDSSDPELNLLNGYMDLLLTYREK
CCHHHHEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ALNQFRMAAPDYLSYRGQALAYRDMQRFDEALEAVDRAIAASCNNPELYYLKAQILVSKG
HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHEECC
QDREAVPLFDQALQASAQLPQPLVEQIQMERDRAAQRSGLTGQLPAAPNP
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA