The gene/protein map for NC_010682 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86609183

Identifier: 86609183

GI number: 86609183

Start: 1804652

End: 1807450

Strand: Direct

Name: 86609183

Synonym: CYB_1724

Alternate gene names: NA

Gene position: 1804652-1807450 (Clockwise)

Preceding gene: 86609180

Following gene: 86609185

Centisome position: 59.23

GC content: 51.88

Gene sequence:

>2799_bases
TTGTCCATCATCCCCCTTGCTTGGAAAGATAAGCCGAGTTTGATCGAGCGGCTCTTGCCTGCCCAAAAAATCAGCGCCGA
AGCGCAAAAGGAACGCAAAGCTGGGGCTGGCCAAACCCTCACGGCGTTGGGGAGCTATTGGAAAGGGCGCAAACCTCTGA
TCCTGGCCAAAGCTTGCGTATTGGGGGCATTGCTACCTGCAACGGATAACCCCGAAGGCGATCTGGAAGTGTTTGAGTTG
CTGATGGGCATTGCTGACAGCAGTTTGGAACGCCGTCTGAAATCGCCACGGGACAAACCCAAATTGGCGCAACGCTCTTA
CCTGGAAAAACTGGAACTCTGCAAACGCCCGGAAGAATGCGACGATGCCACCCTCTACGGCCCCATTTGGGATCGGGTGA
ACCAACATTTGGGGACAAATGCCCACAGTTTCCCGGAATTGGTGGAACAACTGGGGACTTTGCGGTTTGGCCATCGCCCA
CGAGTAGGGGATACCTTTTGCGGCAGCGGTCAAATTCCCTTTGAGGCGGCAAGGCTGGGATGCGATGTCTATGCCAGCGA
CCTCAATCCCATTGCCTGTATGCTCACTTGGGGAGCGCTGAATATCGTGGGAGCCGATGAAGCCACCCGTCGGGAAATTG
AAGCAGCCCAAAAAGCAGTGGCTGAGGCGGTGGATCGGGAAATTACTGCTCTAGGCATTGAGCATGATGAGCACGGCAAC
CGCGCCAAAGCCTACCTATACTGCCTAGAAACCCGTTGCCCCCACACCGGCTGGATGGTGCCAATGGCTCCCAGTTGGGT
GATCAGCAAAACCCGCAATGTGGTGGCCAAGTTAATCCCCAATTACGACCAAAAACGTTTTGAAATTGAAATTGTATCCG
GGGTCAGCGAAGCGGAAATGAAAGCCGCTGCCAAGGGCACCGTTCAGGATGGCGATTTGGTTTACGTTCTGGATGGAGAA
GAGTACCGCACGCCTATTAAAACCATCCGAGGCGATTACCGCCTTCCCGATGGCACCACTGGCAACAAATTGCGCCGTTG
GGAAAAGCACGATTTTATGCCTCGCCCCGACGATATTTTTCAGGAACGGCTGTATTGCATTCAGTGGATCACCGCCGAAA
CATTGGGCAAGAGCCGTCAAGAAACCTTTTTTGCCAGCGTCACCCCCGCCGACCTAGAACGAGAGCGCAAAGTAGAGCAA
ATCGTTAGAGAAAACCTCGCCGCTTGGCAAGAAGCTGGTTTAGTACCCGATATGCCGATTGAACCTGGAGAAAAAACCGA
TGAGCTAATTCGCACGCGGGGCTGGACTTATTGGCATCATTTGTTTAATGCACGACAGCTTATTCTATTGTCAACATTGT
CAAGGCTTTGCAAAAGTGCATCCAGCCAAATTTTTTTATTGCGTACATTAAATAGAAGCTCAAAGCTATGTATGTGGGAA
GGACAAATTGGATATGAGAGCACAAGTCATGTTTTCACCAATCAAGCCTTGAATCCCCTGTTTAACTATGGAATGAGAGG
TTGGACTTTTATGGAGGGTGTCTTTTATGAAAAAGACCTTAAAAGTGTATTCCTACCATGTAAAGCTTCTATATTCCATG
TTTCGGTAAATCAGAACAAAGAAAAATGCAACATTTTCATCACCGATCCACCGTATGCGGATGCGGTGCATTACCACGAG
ATCACGGAATTTTTCATCGCGTGGTTGCGCAAGAATCCCCCCAAGGAGTTTGCCGATTGGGTGTGGGACAGTCGCCGGGC
GTTGGCCATTCAGGGCAAAGGCGAAAAGTTTCGGCAGGACATGATTGCCGCCTATAGTGCCCTAGCGAACCACATGCCCG
ACAACGGGTTGCAGATTGTGATGTTTACCCATCAGGATGCGGAAGTGTGGTCGGATATGGCCAGCATCATGTGGGGGGCG
GGCTTGCAAGTTACAGCCGCTTGGTACATTGCCACCGAAACCACTTCTGAACTCAAAAAGGGCGGTTATGTGCAAGGCAC
GGTGTTGCTGGTGGCGCGTAAGCGGTTGCAAGATACTTCTGCCTATCGGGATGAGTTGGTGGAAGAGGTGCGGCAAGAAG
TTGCCCATCAGATTGAAACCATGGTGGGGCTAAATCAAAGCACCCAAGGCAAGGGGCGCACCGAAAACCTGTTTGAAGAT
GCCGATTTGCAAATGGCAGGTTATGCGGCAGCGTTGCGGGTATTGACGGGCTACCGGCGCATTGATGGACAGGATATGGT
GGCAGCAGCCCTGCGCCCCCGACCCAAAGGCGAAAGAGATATCGTTCGGGAAATTATTGATTATGCCGTGCAGGTTGCCA
ATGAGCATCTTGTACCTGAAGGCATCGCGCAGGGGGTGTGGGAGGGGTGCTGTGGTGCAGAGCGCTTTTATCTGAAAATG
ATGGAACTGGAAGCCGTAGGGCTGAAGAAGCTGGACAACTACCAGAACTTTGCCAAGGCATTTCGAGTTGGCGACTATGG
CAAATTGATGGCCTCTCAGCAGCCCAACAATGCCCGACTCAAAAATGCTCTAGACTTCAAGAAGAGCAGCTTTGAGGGCG
AATTTGGCCGCTCAGCACTGCGAGCCGTTTTGTTTGCTCTCTACGAACTGCAGAAAGAGGCGGATAGCGATGAGGTGATG
GAACACCTGCGGTCTTTGGTGCCCAACTACCACATGCGCCGGGATGATTTGGTGGCTTTTTGTCAATACATTGCCCGCAA
GCGAGAACACCGCTATCCAGAAGAGTCCTCAGCCGCCGGGATCTTGCTCGCCCTTATCAGAAATGAACGCTTGGGTTGA

Upstream 100 bases:

>100_bases
ACCCAGGAGAATATCGGGATCCGAATGAATATAGTCTTCCCAGTTCACGGCTTAGGGCCCTAAGAGCTACCATGATCGAT
GGTATCGCCGGAGATCTCCC

Downstream 100 bases:

>100_bases
AGAAGAAGTTATAGGATTAACTCACTCACAAGTTGTATTGTCAGGGCTTCCTTCAAGCTCAGCATATGAGTTAAAGTATT
TCTCAACAATCGACTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Adenine-Specific DNA Methylase; DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase; DNA MethylAse Containing A Zn-Ribbon; DNA Methylase Containing Zn-Ribbon

Number of amino acids: Translated: 932; Mature: 931

Protein sequence:

>932_residues
MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFEL
LMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRP
RVGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN
RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGE
EYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQ
IVRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE
GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHE
ITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGA
GLQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED
ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKM
MELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVM
EHLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG

Sequences:

>Translated_932_residues
MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFEL
LMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRP
RVGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN
RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGE
EYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQ
IVRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE
GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHE
ITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGA
GLQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED
ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKM
MELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVM
EHLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG
>Mature_931_residues
SIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFELL
MGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPR
VGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGNR
AKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGEE
YRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQI
VRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWEG
QIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHEI
TEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAG
LQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFEDA
DLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKMM
ELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVME
HLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG

Specific function: Unknown

COG id: COG1743

COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105616; Mature: 105485

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACV
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
LGALLPATDNPEGDLEVFELLMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEEC
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
DDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPRVGDTFCGSGQIPFEAARLG
CCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
CDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN
CHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEM
CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
KAAAKGTVQDGDLVYVLDGEEYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIF
HHHHCCCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
QERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQIVRENLAAWQEAGLVPDMPI
HHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE
GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNK
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
EKCNIFITDPPYADAVHYHEITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQD
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHH
MIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAGLQVTAAWYIATETTSELKK
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHC
GGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
GIAQGVWEGCCGAERFYLKMMELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH
KNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVMEHLRSLVPNYHMRRDDLVAF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
CQYIARKREHRYPEESSAAGILLALIRNERLG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACV
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
LGALLPATDNPEGDLEVFELLMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEEC
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
DDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPRVGDTFCGSGQIPFEAARLG
CCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
CDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN
CHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEM
CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
KAAAKGTVQDGDLVYVLDGEEYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIF
HHHHCCCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
QERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQIVRENLAAWQEAGLVPDMPI
HHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE
GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNK
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
EKCNIFITDPPYADAVHYHEITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQD
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHH
MIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAGLQVTAAWYIATETTSELKK
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHC
GGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
GIAQGVWEGCCGAERFYLKMMELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH
KNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVMEHLRSLVPNYHMRRDDLVAF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
CQYIARKREHRYPEESSAAGILLALIRNERLG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA