| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609183
Identifier: 86609183
GI number: 86609183
Start: 1804652
End: 1807450
Strand: Direct
Name: 86609183
Synonym: CYB_1724
Alternate gene names: NA
Gene position: 1804652-1807450 (Clockwise)
Preceding gene: 86609180
Following gene: 86609185
Centisome position: 59.23
GC content: 51.88
Gene sequence:
>2799_bases TTGTCCATCATCCCCCTTGCTTGGAAAGATAAGCCGAGTTTGATCGAGCGGCTCTTGCCTGCCCAAAAAATCAGCGCCGA AGCGCAAAAGGAACGCAAAGCTGGGGCTGGCCAAACCCTCACGGCGTTGGGGAGCTATTGGAAAGGGCGCAAACCTCTGA TCCTGGCCAAAGCTTGCGTATTGGGGGCATTGCTACCTGCAACGGATAACCCCGAAGGCGATCTGGAAGTGTTTGAGTTG CTGATGGGCATTGCTGACAGCAGTTTGGAACGCCGTCTGAAATCGCCACGGGACAAACCCAAATTGGCGCAACGCTCTTA CCTGGAAAAACTGGAACTCTGCAAACGCCCGGAAGAATGCGACGATGCCACCCTCTACGGCCCCATTTGGGATCGGGTGA ACCAACATTTGGGGACAAATGCCCACAGTTTCCCGGAATTGGTGGAACAACTGGGGACTTTGCGGTTTGGCCATCGCCCA CGAGTAGGGGATACCTTTTGCGGCAGCGGTCAAATTCCCTTTGAGGCGGCAAGGCTGGGATGCGATGTCTATGCCAGCGA CCTCAATCCCATTGCCTGTATGCTCACTTGGGGAGCGCTGAATATCGTGGGAGCCGATGAAGCCACCCGTCGGGAAATTG AAGCAGCCCAAAAAGCAGTGGCTGAGGCGGTGGATCGGGAAATTACTGCTCTAGGCATTGAGCATGATGAGCACGGCAAC CGCGCCAAAGCCTACCTATACTGCCTAGAAACCCGTTGCCCCCACACCGGCTGGATGGTGCCAATGGCTCCCAGTTGGGT GATCAGCAAAACCCGCAATGTGGTGGCCAAGTTAATCCCCAATTACGACCAAAAACGTTTTGAAATTGAAATTGTATCCG GGGTCAGCGAAGCGGAAATGAAAGCCGCTGCCAAGGGCACCGTTCAGGATGGCGATTTGGTTTACGTTCTGGATGGAGAA GAGTACCGCACGCCTATTAAAACCATCCGAGGCGATTACCGCCTTCCCGATGGCACCACTGGCAACAAATTGCGCCGTTG GGAAAAGCACGATTTTATGCCTCGCCCCGACGATATTTTTCAGGAACGGCTGTATTGCATTCAGTGGATCACCGCCGAAA CATTGGGCAAGAGCCGTCAAGAAACCTTTTTTGCCAGCGTCACCCCCGCCGACCTAGAACGAGAGCGCAAAGTAGAGCAA ATCGTTAGAGAAAACCTCGCCGCTTGGCAAGAAGCTGGTTTAGTACCCGATATGCCGATTGAACCTGGAGAAAAAACCGA TGAGCTAATTCGCACGCGGGGCTGGACTTATTGGCATCATTTGTTTAATGCACGACAGCTTATTCTATTGTCAACATTGT CAAGGCTTTGCAAAAGTGCATCCAGCCAAATTTTTTTATTGCGTACATTAAATAGAAGCTCAAAGCTATGTATGTGGGAA GGACAAATTGGATATGAGAGCACAAGTCATGTTTTCACCAATCAAGCCTTGAATCCCCTGTTTAACTATGGAATGAGAGG TTGGACTTTTATGGAGGGTGTCTTTTATGAAAAAGACCTTAAAAGTGTATTCCTACCATGTAAAGCTTCTATATTCCATG TTTCGGTAAATCAGAACAAAGAAAAATGCAACATTTTCATCACCGATCCACCGTATGCGGATGCGGTGCATTACCACGAG ATCACGGAATTTTTCATCGCGTGGTTGCGCAAGAATCCCCCCAAGGAGTTTGCCGATTGGGTGTGGGACAGTCGCCGGGC GTTGGCCATTCAGGGCAAAGGCGAAAAGTTTCGGCAGGACATGATTGCCGCCTATAGTGCCCTAGCGAACCACATGCCCG ACAACGGGTTGCAGATTGTGATGTTTACCCATCAGGATGCGGAAGTGTGGTCGGATATGGCCAGCATCATGTGGGGGGCG GGCTTGCAAGTTACAGCCGCTTGGTACATTGCCACCGAAACCACTTCTGAACTCAAAAAGGGCGGTTATGTGCAAGGCAC GGTGTTGCTGGTGGCGCGTAAGCGGTTGCAAGATACTTCTGCCTATCGGGATGAGTTGGTGGAAGAGGTGCGGCAAGAAG TTGCCCATCAGATTGAAACCATGGTGGGGCTAAATCAAAGCACCCAAGGCAAGGGGCGCACCGAAAACCTGTTTGAAGAT GCCGATTTGCAAATGGCAGGTTATGCGGCAGCGTTGCGGGTATTGACGGGCTACCGGCGCATTGATGGACAGGATATGGT GGCAGCAGCCCTGCGCCCCCGACCCAAAGGCGAAAGAGATATCGTTCGGGAAATTATTGATTATGCCGTGCAGGTTGCCA ATGAGCATCTTGTACCTGAAGGCATCGCGCAGGGGGTGTGGGAGGGGTGCTGTGGTGCAGAGCGCTTTTATCTGAAAATG ATGGAACTGGAAGCCGTAGGGCTGAAGAAGCTGGACAACTACCAGAACTTTGCCAAGGCATTTCGAGTTGGCGACTATGG CAAATTGATGGCCTCTCAGCAGCCCAACAATGCCCGACTCAAAAATGCTCTAGACTTCAAGAAGAGCAGCTTTGAGGGCG AATTTGGCCGCTCAGCACTGCGAGCCGTTTTGTTTGCTCTCTACGAACTGCAGAAAGAGGCGGATAGCGATGAGGTGATG GAACACCTGCGGTCTTTGGTGCCCAACTACCACATGCGCCGGGATGATTTGGTGGCTTTTTGTCAATACATTGCCCGCAA GCGAGAACACCGCTATCCAGAAGAGTCCTCAGCCGCCGGGATCTTGCTCGCCCTTATCAGAAATGAACGCTTGGGTTGA
Upstream 100 bases:
>100_bases ACCCAGGAGAATATCGGGATCCGAATGAATATAGTCTTCCCAGTTCACGGCTTAGGGCCCTAAGAGCTACCATGATCGAT GGTATCGCCGGAGATCTCCC
Downstream 100 bases:
>100_bases AGAAGAAGTTATAGGATTAACTCACTCACAAGTTGTATTGTCAGGGCTTCCTTCAAGCTCAGCATATGAGTTAAAGTATT TCTCAACAATCGACTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Adenine-Specific DNA Methylase; DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase; DNA MethylAse Containing A Zn-Ribbon; DNA Methylase Containing Zn-Ribbon
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFEL LMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRP RVGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGE EYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQ IVRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHE ITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGA GLQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKM MELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVM EHLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG
Sequences:
>Translated_932_residues MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFEL LMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRP RVGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGE EYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQ IVRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHE ITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGA GLQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKM MELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVM EHLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG >Mature_931_residues SIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACVLGALLPATDNPEGDLEVFELL MGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEECDDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPR VGDTFCGSGQIPFEAARLGCDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGNR AKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEMKAAAKGTVQDGDLVYVLDGEE YRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIFQERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQI VRENLAAWQEAGLVPDMPIEPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWEG QIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNKEKCNIFITDPPYADAVHYHEI TEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQDMIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAG LQVTAAWYIATETTSELKKGGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFEDA DLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPEGIAQGVWEGCCGAERFYLKMM ELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARLKNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVME HLRSLVPNYHMRRDDLVAFCQYIARKREHRYPEESSAAGILLALIRNERLG
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105616; Mature: 105485
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACV CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH LGALLPATDNPEGDLEVFELLMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEEC HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPRVGDTFCGSGQIPFEAARLG CCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC CDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN CHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEM CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH KAAAKGTVQDGDLVYVLDGEEYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIF HHHHCCCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH QERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQIVRENLAAWQEAGLVPDMPI HHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNK CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC EKCNIFITDPPYADAVHYHEITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHH MIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAGLQVTAAWYIATETTSELKK HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHC GGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH GIAQGVWEGCCGAERFYLKMMELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH KNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVMEHLRSLVPNYHMRRDDLVAF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH CQYIARKREHRYPEESSAAGILLALIRNERLG HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SIIPLAWKDKPSLIERLLPAQKISAEAQKERKAGAGQTLTALGSYWKGRKPLILAKACV CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH LGALLPATDNPEGDLEVFELLMGIADSSLERRLKSPRDKPKLAQRSYLEKLELCKRPEEC HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DDATLYGPIWDRVNQHLGTNAHSFPELVEQLGTLRFGHRPRVGDTFCGSGQIPFEAARLG CCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC CDVYASDLNPIACMLTWGALNIVGADEATRREIEAAQKAVAEAVDREITALGIEHDEHGN CHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC RAKAYLYCLETRCPHTGWMVPMAPSWVISKTRNVVAKLIPNYDQKRFEIEIVSGVSEAEM CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH KAAAKGTVQDGDLVYVLDGEEYRTPIKTIRGDYRLPDGTTGNKLRRWEKHDFMPRPDDIF HHHHCCCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH QERLYCIQWITAETLGKSRQETFFASVTPADLERERKVEQIVRENLAAWQEAGLVPDMPI HHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPGEKTDELIRTRGWTYWHHLFNARQLILLSTLSRLCKSASSQIFLLRTLNRSSKLCMWE CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE GQIGYESTSHVFTNQALNPLFNYGMRGWTFMEGVFYEKDLKSVFLPCKASIFHVSVNQNK CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC EKCNIFITDPPYADAVHYHEITEFFIAWLRKNPPKEFADWVWDSRRALAIQGKGEKFRQD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHH MIAAYSALANHMPDNGLQIVMFTHQDAEVWSDMASIMWGAGLQVTAAWYIATETTSELKK HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHC GGYVQGTVLLVARKRLQDTSAYRDELVEEVRQEVAHQIETMVGLNQSTQGKGRTENLFED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC ADLQMAGYAAALRVLTGYRRIDGQDMVAAALRPRPKGERDIVREIIDYAVQVANEHLVPE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH GIAQGVWEGCCGAERFYLKMMELEAVGLKKLDNYQNFAKAFRVGDYGKLMASQQPNNARL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH KNALDFKKSSFEGEFGRSALRAVLFALYELQKEADSDEVMEHLRSLVPNYHMRRDDLVAF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH CQYIARKREHRYPEESSAAGILLALIRNERLG HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA