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The map label for this gene is pds [H]

Identifier: 86609154

GI number: 86609154

Start: 1771093

End: 1772511

Strand: Direct

Name: pds [H]

Synonym: CYB_1694

Alternate gene names: 86609154

Gene position: 1771093-1772511 (Clockwise)

Preceding gene: 86609152

Following gene: 86609155

Centisome position: 58.13

GC content: 60.54

Gene sequence:

>1419_bases
ATGCGTGTTGCCATTGCTGGTGGCGGGCTGGCCGGGCTGGCCTGTGCCAAGTATCTCTGCGATGCCGGGCATCAACCGCT
CCTCTTTGAGCGGCGGGATGTTTTGGGTGGCCTGGTGGCTGCCTGGAAAGATGCCGACGGCGACTGGATCGAGACGGGGC
TGCACAACTTTTTTGGCGCCTACCCCAACACGTTGCAGCTGTTCCGGGAGCTGGGCATCTCCGATCGCCTGCAGTGGAAG
GAACACAGCTTGATTTTCAACCAGCCGGACAAGCCGGGCACCTATTCCCGCTTTGACCTGCCGGATATTCCCGCTCCTTT
CAACGCCATTGTCGGCATCTTGCGCAACAACGACATGCTCACCTGGGGGGAAAAGGTGAAGTTTGCCCTGGGGCTGGTGC
CGGCCATGATTCGCGGCCAGCGCTATGTGGAGCAGATGGATCGCTATAGCCTCTTGGAATGGCTGCGGCGGCAGGGTATT
GACGAGCGGGTCAACACCGATATTTTCATTGCCGTCTCCAAGGCCCTGGCCTTCATCAACCCGGAGGAGATCTCGGCCAT
GGTGCCCCTGACGGCCTTGAACCGCTTTTTGCAGCAAAAAGATGGCTCTAGGATTGCCTACCTAGACGGCGCTCCCCCAG
AGCGGCTCTGCCAGCCGATGGTGGACTACATTGTCGCCCGTGGGGGGGAAGTGCATTTGAAGGCGGCGTTGCAGGACATT
CGTCTCAACCTCGATAACAGCGTGGCCGGGTTTTGCTTAGCCACCCCCTCTGGGCCGGTGGAGGTGACTGCCGATGCCTA
TGTCTCGGCCCTTTCGGTGGACGCGCTCAAGGAGCTGCTGCCGGCGCAGTGGTGGGGGATCCCCTTTTTCCAAAAGCTGC
GTGAACTGGAGGGGGTGCCAGTAATTAGCCTGCAGATCTGGTTTGACCGCAAGATTACTCACATCGATCACTCCTTGTTT
TCCCGCTCGCCGCTATTGAGCGTGTATGCCGACATGAGCAACACCTGCCGGGCCTATGCCGATCCGGAGCGGTCCATGTT
GGAGCTGGTGCTGGCTCCGGCTGCCGAGTGGATTGATCGCGGCGATGAGGAGATCTTTGCCGCCACGCTGGAGGAACTGA
AAAAACTCTTTCCCCAGCACCTTACCGGCCCCAACCCCGCCCGCGTGCGCAAGTGGGTGGTGGTGAAAACGCCGCGCTCG
GTCTACAAGGCTACCCCTGGCAGACAGCAGTATCGCCCCACTCAAGTTACCCCTATTCCCAACTTCTTCTTGGCGGGCAG
CTACACCCTACAGCCCTTCCTGGGCAGCATGGAGGGGGCCATCCTCTCCGGCAAGTGGGCGGCGGAGGCCATCAACAAGG
GGATCCCATTTCAACGCGCTTCTGTCTCGGCCTCAACTCTGGCAGCTGCGGGGGTCTAG

Upstream 100 bases:

>100_bases
TTCCGCTGCTTTTGCTGGGTCGGCCTTCCGTCTGCCCCTTGGCCCCGGCAATTGTAACGGTTTGCAAATAGAATAAAAAT
GTTGCTTTGTCGTTACCCTC

Downstream 100 bases:

>100_bases
CTCTCCGCCGTCCGCCTCCTATGCCTTTTGAATCTTTCTTTTCCCCACAACCTCTTCTAGGCTATCCGCGGCGTCCGCTT
TCCCGTAGTGTTGATATGTG

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRVAIAGGGLAGLACAKYLCDAGHQPLLFERRDVLGGLVAAWKDADGDWIETGLHNFFGAYPNTLQLFRELGISDRLQWK
EHSLIFNQPDKPGTYSRFDLPDIPAPFNAIVGILRNNDMLTWGEKVKFALGLVPAMIRGQRYVEQMDRYSLLEWLRRQGI
DERVNTDIFIAVSKALAFINPEEISAMVPLTALNRFLQQKDGSRIAYLDGAPPERLCQPMVDYIVARGGEVHLKAALQDI
RLNLDNSVAGFCLATPSGPVEVTADAYVSALSVDALKELLPAQWWGIPFFQKLRELEGVPVISLQIWFDRKITHIDHSLF
SRSPLLSVYADMSNTCRAYADPERSMLELVLAPAAEWIDRGDEEIFAATLEELKKLFPQHLTGPNPARVRKWVVVKTPRS
VYKATPGRQQYRPTQVTPIPNFFLAGSYTLQPFLGSMEGAILSGKWAAEAINKGIPFQRASVSASTLAAAGV

Sequences:

>Translated_472_residues
MRVAIAGGGLAGLACAKYLCDAGHQPLLFERRDVLGGLVAAWKDADGDWIETGLHNFFGAYPNTLQLFRELGISDRLQWK
EHSLIFNQPDKPGTYSRFDLPDIPAPFNAIVGILRNNDMLTWGEKVKFALGLVPAMIRGQRYVEQMDRYSLLEWLRRQGI
DERVNTDIFIAVSKALAFINPEEISAMVPLTALNRFLQQKDGSRIAYLDGAPPERLCQPMVDYIVARGGEVHLKAALQDI
RLNLDNSVAGFCLATPSGPVEVTADAYVSALSVDALKELLPAQWWGIPFFQKLRELEGVPVISLQIWFDRKITHIDHSLF
SRSPLLSVYADMSNTCRAYADPERSMLELVLAPAAEWIDRGDEEIFAATLEELKKLFPQHLTGPNPARVRKWVVVKTPRS
VYKATPGRQQYRPTQVTPIPNFFLAGSYTLQPFLGSMEGAILSGKWAAEAINKGIPFQRASVSASTLAAAGV
>Mature_472_residues
MRVAIAGGGLAGLACAKYLCDAGHQPLLFERRDVLGGLVAAWKDADGDWIETGLHNFFGAYPNTLQLFRELGISDRLQWK
EHSLIFNQPDKPGTYSRFDLPDIPAPFNAIVGILRNNDMLTWGEKVKFALGLVPAMIRGQRYVEQMDRYSLLEWLRRQGI
DERVNTDIFIAVSKALAFINPEEISAMVPLTALNRFLQQKDGSRIAYLDGAPPERLCQPMVDYIVARGGEVHLKAALQDI
RLNLDNSVAGFCLATPSGPVEVTADAYVSALSVDALKELLPAQWWGIPFFQKLRELEGVPVISLQIWFDRKITHIDHSLF
SRSPLLSVYADMSNTCRAYADPERSMLELVLAPAAEWIDRGDEEIFAATLEELKKLFPQHLTGPNPARVRKWVVVKTPRS
VYKATPGRQQYRPTQVTPIPNFFLAGSYTLQPFLGSMEGAILSGKWAAEAINKGIPFQRASVSASTLAAAGV

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014102 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: 1.3.99.-

Molecular weight: Translated: 52410; Mature: 52410

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIAGGGLAGLACAKYLCDAGHQPLLFERRDVLGGLVAAWKDADGDWIETGLHNFFGA
CEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
YPNTLQLFRELGISDRLQWKEHSLIFNQPDKPGTYSRFDLPDIPAPFNAIVGILRNNDML
CCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE
TWGEKVKFALGLVPAMIRGQRYVEQMDRYSLLEWLRRQGIDERVNTDIFIAVSKALAFIN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEHHHHHHCC
PEEISAMVPLTALNRFLQQKDGSRIAYLDGAPPERLCQPMVDYIVARGGEVHLKAALQDI
HHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHH
RLNLDNSVAGFCLATPSGPVEVTADAYVSALSVDALKELLPAQWWGIPFFQKLRELEGVP
HHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
VISLQIWFDRKITHIDHSLFSRSPLLSVYADMSNTCRAYADPERSMLELVLAPAAEWIDR
EEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GDEEIFAATLEELKKLFPQHLTGPNPARVRKWVVVKTPRSVYKATPGRQQYRPTQVTPIP
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCHHHHHCCCCCCCCCCCCCCCCC
NFFLAGSYTLQPFLGSMEGAILSGKWAAEAINKGIPFQRASVSASTLAAAGV
CEEECCCCCHHHHHCCCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRVAIAGGGLAGLACAKYLCDAGHQPLLFERRDVLGGLVAAWKDADGDWIETGLHNFFGA
CEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
YPNTLQLFRELGISDRLQWKEHSLIFNQPDKPGTYSRFDLPDIPAPFNAIVGILRNNDML
CCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE
TWGEKVKFALGLVPAMIRGQRYVEQMDRYSLLEWLRRQGIDERVNTDIFIAVSKALAFIN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEHHHHHHCC
PEEISAMVPLTALNRFLQQKDGSRIAYLDGAPPERLCQPMVDYIVARGGEVHLKAALQDI
HHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHH
RLNLDNSVAGFCLATPSGPVEVTADAYVSALSVDALKELLPAQWWGIPFFQKLRELEGVP
HHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
VISLQIWFDRKITHIDHSLFSRSPLLSVYADMSNTCRAYADPERSMLELVLAPAAEWIDR
EEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GDEEIFAATLEELKKLFPQHLTGPNPARVRKWVVVKTPRSVYKATPGRQQYRPTQVTPIP
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCHHHHHCCCCCCCCCCCCCCCCC
NFFLAGSYTLQPFLGSMEGAILSGKWAAEAINKGIPFQRASVSASTLAAAGV
CEEECCCCCHHHHHCCCCCCEECCCHHHHHHHCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1907510 [H]