| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609039
Identifier: 86609039
GI number: 86609039
Start: 1647491
End: 1647931
Strand: Direct
Name: 86609039
Synonym: CYB_1574
Alternate gene names: NA
Gene position: 1647491-1647931 (Clockwise)
Preceding gene: 86609038
Following gene: 86609042
Centisome position: 54.07
GC content: 64.85
Gene sequence:
>441_bases GTGCGGGGCAGCCGCCGTGGCTGGGAATGGCGTTGGGGATCCCTGCGCCTTCGCGGCCGTTGGCCGGCGCAGCGGGGAGA ACGTTGCTCCCCCAGAGATTGGCCCTACCTGTGGAAGCTGGGCAAGCAGCTCCACATCCAATCTTGGCAAGGAGGGGTGG AAATTGGCTTTGCCGATCCGGCTTTGACGGGGCAATGCTTGGGACTAATCGCCGCTCTACCCCCTCAGTTGGCCCAACAC CTGCGCTTGACCTTCGCTCGCATCGGTTGGCACGGATGGGGATCCCTGGTGATCCGGTTGCGCGGCTGGCAGGTGCTGGG GCTGGCCTTGAAACTGGGGTGGCTCGCCCTATCGCGCCATCGGAAGGGATCCCCAGCAAAAATAGCCCATGGGACAGCTG GCGTCAGGAGCAAAGCGCTGGGGGGGGAACTGCAGCGCTGA
Upstream 100 bases:
>100_bases TCTCTTGTTCTGGCCTCAACAGCTCATTCTGCGCTACCGCAAACCCTGGCAGGGCCCCCTTGCCTGGATCTGGAAATGGC ACGGCTGGGGAGGCTGGGCC
Downstream 100 bases:
>100_bases CGCGGTCAGGCCGGCTGCAGCGCCGGGCAGCAATTCAACAGAGGCATGACCTACCCGCCTCCCCCTTCGCCCTGGCCGTT GGTAGGGGTGGGGGCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR
Sequences:
>Translated_146_residues MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR >Mature_146_residues MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16451; Mature: 16451
Theoretical pI: Translated: 12.42; Mature: 12.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADP CCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCC ALTGQCLGLIAALPPQLAQHLRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRH CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC RKGSPAKIAHGTAGVRSKALGGELQR CCCCCCEEECCCCCCHHHCCCCCCCC >Mature Secondary Structure MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADP CCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCC ALTGQCLGLIAALPPQLAQHLRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRH CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC RKGSPAKIAHGTAGVRSKALGGELQR CCCCCCEEECCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA