Click here to switch to the map view.

The map label for this gene is glgC [H]

Identifier: 86609014

GI number: 86609014

Start: 1624023

End: 1625144

Strand: Reverse

Name: glgC [H]

Synonym: CYB_1549

Alternate gene names: 86609014

Gene position: 1625144-1624023 (Counterclockwise)

Preceding gene: 86609017

Following gene: 86609013

Centisome position: 53.34

GC content: 57.93

Gene sequence:

>1122_bases
ATGAAAGCCATGATCCTGGCAGCAGGCAAAGGCACGCGGGTACGGCCCATCACCTACATGATGCCGAAGCCGATGATCCC
CATTTTGCACAAGCCTGTCATGGAATTTTTGGTGGAGCTGCTGCGGGAACACGGCTTCGACCAGATCATGGTCAACACCA
GCCACTTGGCCCACCAAATCGAAGACTACTTTCGAGATGGGCAGCAATGGGGGGTTCACATCGGCTTTTCCTTCGAAGGC
CATTTTGAGAACGGCCAGCCGGTGGCCGAACCTCTGGGCTCCGCTGGCGGTATGCGCAAGATCCAGGATTTCTCCGGATT
TTTCGACAGTACCTTTGTGGTGCTCTGTGGGGATGCCCTGATCGACCTGAACCTCACGCAGATCGTCAACTTCCACAAAT
CCAAGGGAGCGCTGGCCACTGTGGTCCTGCGGCAGGTGGATCCCAGCCAGGTCTCCAGCTATGGGGTGGTAGTCACCGAC
GAGACGGGTCGCATCACTGCTTTCCAAGAAAAGCCTAGGCGGGAAGAGGCCCTCGGCCACACCATCAACACCGGCATCTA
TGTTTTCGAGCCGGAAGTGTTCGACTACATTCCCCCCGGCTGCCCCTACGACATCGGCAGCGATCTCTTCCCGGCCTTGG
TGAAAGCGGGTGCCCCCTTTTATGGGATCACGGCTGACTTTCAGTGGGTGGACATTGGCCGCACCCACGACTACTGGCTG
GCGGTGCAAAAAGTGCTGCGCGGCGAGATCAAGGGAGTCAAGGTGCCCGGGATCCAGATTCAACCCGGCGTATGGACGGG
GATCAACATCCGCGCCAACTGGGATCGCATCCACATCGAGCCACCGGTCTACATCGGGGCCAGCAGCTATTTGGCGGACG
GGGTCAAACTCATCGGCCCCACGGCAATTGGCTACGGATGTGTGTTGAATGAAGGGTGTACGCTGGATAGCAGCTTGATT
TTTAACTACACCCAGATTGCGGCAGGCGTGACCCTACGCCACCAGATGGTGATGGGTCGCTACTGCATTTCCTCGGATGG
CAATGCCATCGACACCGAAGAGTCCAACCTCACGTGGCTGATCGGAGATGCCCGCAGCAATGCCAACGGCAAATCCCCAT
AG

Upstream 100 bases:

>100_bases
AGCGATTCCCCGGCCTCTTGAAAGCCCCACCGGTTCTCTGGAATGCCGATCCTGGGATGATAAAGTCAGAGCACGGTTAG
CCCGGAGGAGTGACGACGGC

Downstream 100 bases:

>100_bases
CGCCCTCTACCTCTACGGGATCGTCGCTGCCCCTGGCCCGCGTCATCTGAGTGTGGTGGGGCTGGACAAGCAGCCGGTGC
AGGTTCATGGGCTGGGATCC

Product: nucleotidyl transferase family protein

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKAMILAAGKGTRVRPITYMMPKPMIPILHKPVMEFLVELLREHGFDQIMVNTSHLAHQIEDYFRDGQQWGVHIGFSFEG
HFENGQPVAEPLGSAGGMRKIQDFSGFFDSTFVVLCGDALIDLNLTQIVNFHKSKGALATVVLRQVDPSQVSSYGVVVTD
ETGRITAFQEKPRREEALGHTINTGIYVFEPEVFDYIPPGCPYDIGSDLFPALVKAGAPFYGITADFQWVDIGRTHDYWL
AVQKVLRGEIKGVKVPGIQIQPGVWTGINIRANWDRIHIEPPVYIGASSYLADGVKLIGPTAIGYGCVLNEGCTLDSSLI
FNYTQIAAGVTLRHQMVMGRYCISSDGNAIDTEESNLTWLIGDARSNANGKSP

Sequences:

>Translated_373_residues
MKAMILAAGKGTRVRPITYMMPKPMIPILHKPVMEFLVELLREHGFDQIMVNTSHLAHQIEDYFRDGQQWGVHIGFSFEG
HFENGQPVAEPLGSAGGMRKIQDFSGFFDSTFVVLCGDALIDLNLTQIVNFHKSKGALATVVLRQVDPSQVSSYGVVVTD
ETGRITAFQEKPRREEALGHTINTGIYVFEPEVFDYIPPGCPYDIGSDLFPALVKAGAPFYGITADFQWVDIGRTHDYWL
AVQKVLRGEIKGVKVPGIQIQPGVWTGINIRANWDRIHIEPPVYIGASSYLADGVKLIGPTAIGYGCVLNEGCTLDSSLI
FNYTQIAAGVTLRHQMVMGRYCISSDGNAIDTEESNLTWLIGDARSNANGKSP
>Mature_373_residues
MKAMILAAGKGTRVRPITYMMPKPMIPILHKPVMEFLVELLREHGFDQIMVNTSHLAHQIEDYFRDGQQWGVHIGFSFEG
HFENGQPVAEPLGSAGGMRKIQDFSGFFDSTFVVLCGDALIDLNLTQIVNFHKSKGALATVVLRQVDPSQVSSYGVVVTD
ETGRITAFQEKPRREEALGHTINTGIYVFEPEVFDYIPPGCPYDIGSDLFPALVKAGAPFYGITADFQWVDIGRTHDYWL
AVQKVLRGEIKGVKVPGIQIQPGVWTGINIRANWDRIHIEPPVYIGASSYLADGVKLIGPTAIGYGCVLNEGCTLDSSLI
FNYTQIAAGVTLRHQMVMGRYCISSDGNAIDTEESNLTWLIGDARSNANGKSP

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI11761621, Length=361, Percent_Identity=28.5318559556787, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI11761619, Length=331, Percent_Identity=29.0030211480363, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI31881779, Length=369, Percent_Identity=23.0352303523035, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI45447090, Length=369, Percent_Identity=23.0352303523035, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1789837, Length=395, Percent_Identity=23.2911392405063, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788351, Length=194, Percent_Identity=28.8659793814433, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI133931050, Length=346, Percent_Identity=30.9248554913295, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17509979, Length=333, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320148, Length=346, Percent_Identity=29.7687861271676, Blast_Score=133, Evalue=4e-32,
Organism=Drosophila melanogaster, GI21355443, Length=349, Percent_Identity=30.0859598853868, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24644084, Length=349, Percent_Identity=30.0859598853868, Blast_Score=144, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 41066; Mature: 41066

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMILAAGKGTRVRPITYMMPKPMIPILHKPVMEFLVELLREHGFDQIMVNTSHLAHQI
CCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH
EDYFRDGQQWGVHIGFSFEGHFENGQPVAEPLGSAGGMRKIQDFSGFFDSTFVVLCGDAL
HHHHCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCEE
IDLNLTQIVNFHKSKGALATVVLRQVDPSQVSSYGVVVTDETGRITAFQEKPRREEALGH
EECCHHHHHHHHCCCCCEEEHEECCCCHHHHCCCEEEEECCCCCEEEECCCCCHHHHCCC
TINTGIYVFEPEVFDYIPPGCPYDIGSDLFPALVKAGAPFYGITADFQWVDIGRTHDYWL
EECCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCCCCHHHH
AVQKVLRGEIKGVKVPGIQIQPGVWTGINIRANWDRIHIEPPVYIGASSYLADGVKLIGP
HHHHHHHCCCCCEECCCEEECCCEEECEEEEECCCEEEECCCEEECCHHHHHCCEEEECC
TAIGYGCVLNEGCTLDSSLIFNYTQIAAGVTLRHQMVMGRYCISSDGNAIDTEESNLTWL
CCCCCCEEECCCCCCCHHHHEEHHHHHHCHHHHHHHHHHHEEECCCCCEECCCCCCEEEE
IGDARSNANGKSP
EECCCCCCCCCCC
>Mature Secondary Structure
MKAMILAAGKGTRVRPITYMMPKPMIPILHKPVMEFLVELLREHGFDQIMVNTSHLAHQI
CCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH
EDYFRDGQQWGVHIGFSFEGHFENGQPVAEPLGSAGGMRKIQDFSGFFDSTFVVLCGDAL
HHHHCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCEE
IDLNLTQIVNFHKSKGALATVVLRQVDPSQVSSYGVVVTDETGRITAFQEKPRREEALGH
EECCHHHHHHHHCCCCCEEEHEECCCCHHHHCCCEEEEECCCCCEEEECCCCCHHHHCCC
TINTGIYVFEPEVFDYIPPGCPYDIGSDLFPALVKAGAPFYGITADFQWVDIGRTHDYWL
EECCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCCCCHHHH
AVQKVLRGEIKGVKVPGIQIQPGVWTGINIRANWDRIHIEPPVYIGASSYLADGVKLIGP
HHHHHHHCCCCCEECCCEEECCCEEECEEEEECCCEEEECCCEEECCHHHHHCCEEEECC
TAIGYGCVLNEGCTLDSSLIFNYTQIAAGVTLRHQMVMGRYCISSDGNAIDTEESNLTWL
CCCCCCEEECCCCCCCHHHHEEHHHHHHCHHHHHHHHHHHEEECCCCCEECCCCCCEEEE
IGDARSNANGKSP
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA