| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608969
Identifier: 86608969
GI number: 86608969
Start: 1575253
End: 1576710
Strand: Reverse
Name: 86608969
Synonym: CYB_1502
Alternate gene names: NA
Gene position: 1576710-1575253 (Counterclockwise)
Preceding gene: 86608970
Following gene: 86608961
Centisome position: 51.75
GC content: 60.56
Gene sequence:
>1458_bases TTGTCACCACCGCCCCATTTTGCCCGTCCTCCCCTCGACTTTATTCCGCCCGCCTATAGCGCCTGGGTGCTACGGCTCGT CCACGGGATCCTGCCCCTGCTCTTGCGGGTGAGGGTGCGGCGCTGGCTTCCTTCCGGCATTGCCAAAATCGAGGCCACAG GGGCGGAGATCTTGGCGCGGCTCTACCACCAGTTCCAGGAGGGTCAAATTCGCCTAGTCCTGGCTTTCCGACATGTGGAG GTGGATGACCCGCTGGTGGGCCTGTACGTTCTATCTCGCCTGGTGCCCGAAGCCGCCCGTCGACAAGGGATCCGCCTTCG AGAACCCCTTCACGCCCATTTTCTCTACGACCGGGGCATGCCCCTCTGGGGAGGGGAATGGCTGGGGTGGCTGTTGTCTC GCCTGGGCGGGATCCCTATACGCCGCGGTCGGAGGGTGGATCGGGTGGCGCTAAAGGCGGCCCGGCAACTGCTCCTGGAT GGGCAATTTCCCTTTGCAATCGCCCCAGAAGGAGCCACCAACGGCCACAGCGAACGGATCAATCCCCTGGAACCGGGAAT GGCTCAGCTGTGCTTTTGGTGCGCCGAGGACCTGGCCAAAGCTGGTCGCTCAGAGACCGTCATTTTGCTGCCCATTGGCA TTCGGTACTACTACACGGATCCCTCCTGGACGAAGCTGGAGCGCCTGCTGGCGCGCCTTGAGCACTTGAGTGGGTTGACG CCTCCGAAGCCAGAGCCAAGATCCTCCAGGAGCCCCAACCTTCGCTACACCCAGCGGATCTGCCGCCTAGCCCAGCATCT CCTGGGACAACTGGAAGCCTTCTACGACCTACCTCCTTTTGTCTCCGAAAGAGATGATAAAGAGCCACCGCTAGAGCAGA GGCTAGCCCCTGGCCACTTCAACGCTCGCCTGGGGCGGCTGCTCCACAAAGCTCTGGAAACTGCGGAGACCTACTTCGGC CTATCTCCCCAGGGGGATTGGAACAGCCGTTGCCGCCGCATTGAAGAAGTCGCCTGGATCCAGATTTACCGAGAAGAATT GCGGCATCCTGGATCCCTGTCTCCCCTGCAGCGGGGGTTGCTCGACTGGAAAGCCCACCAGGCAACGCTCTACCTGCAGC ACATGCGCTTGGTGGAAAGCTGTGTAGCCGTCCAGGAAGAGTATTTGCTGAGCAAACCCTCTTTTGAGCGGCTGGCAGAA ACTGCCCTCATTCTATTTGATGTGCTGGCCCGCCTTCGAGGGGAATCCTACCCAGCCCGCCCTCGCCTAGGCTGGCGGGG GGTTCACGTGACCGTCGGGGATCCCATCTCCGTTAGCGAGCGGTTAGAGCGGTATTGCCGAGGCCGCCAGGAAGCCAAAC AGGCGGTGACCGAGCTAACTCAGGATGTTTTTTCTTTCCAATTTCTTTCTTTTTCCTTTCCAATTTCTAGGGATCCCCCA AGGGGGGAACCAGCTTAG
Upstream 100 bases:
>100_bases CTGTAGCGACTTGATGAATAATCTGAGCGATGGGATATGAATCTGATTTGCGTTTAACTACACTTCTTCTCTTGAGCTAC CTTGGGAACAAATCTTGCTC
Downstream 100 bases:
>100_bases GTGAGAAGCCTGGCACTACTGCCGAGAGACTGCTGAAAGATAAACCACCTTCCCATCATAGAACAGAGCTGAGCCTTGGT CGCCCCGCTGGGACTCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MSPPPHFARPPLDFIPPAYSAWVLRLVHGILPLLLRVRVRRWLPSGIAKIEATGAEILARLYHQFQEGQIRLVLAFRHVE VDDPLVGLYVLSRLVPEAARRQGIRLREPLHAHFLYDRGMPLWGGEWLGWLLSRLGGIPIRRGRRVDRVALKAARQLLLD GQFPFAIAPEGATNGHSERINPLEPGMAQLCFWCAEDLAKAGRSETVILLPIGIRYYYTDPSWTKLERLLARLEHLSGLT PPKPEPRSSRSPNLRYTQRICRLAQHLLGQLEAFYDLPPFVSERDDKEPPLEQRLAPGHFNARLGRLLHKALETAETYFG LSPQGDWNSRCRRIEEVAWIQIYREELRHPGSLSPLQRGLLDWKAHQATLYLQHMRLVESCVAVQEEYLLSKPSFERLAE TALILFDVLARLRGESYPARPRLGWRGVHVTVGDPISVSERLERYCRGRQEAKQAVTELTQDVFSFQFLSFSFPISRDPP RGEPA
Sequences:
>Translated_485_residues MSPPPHFARPPLDFIPPAYSAWVLRLVHGILPLLLRVRVRRWLPSGIAKIEATGAEILARLYHQFQEGQIRLVLAFRHVE VDDPLVGLYVLSRLVPEAARRQGIRLREPLHAHFLYDRGMPLWGGEWLGWLLSRLGGIPIRRGRRVDRVALKAARQLLLD GQFPFAIAPEGATNGHSERINPLEPGMAQLCFWCAEDLAKAGRSETVILLPIGIRYYYTDPSWTKLERLLARLEHLSGLT PPKPEPRSSRSPNLRYTQRICRLAQHLLGQLEAFYDLPPFVSERDDKEPPLEQRLAPGHFNARLGRLLHKALETAETYFG LSPQGDWNSRCRRIEEVAWIQIYREELRHPGSLSPLQRGLLDWKAHQATLYLQHMRLVESCVAVQEEYLLSKPSFERLAE TALILFDVLARLRGESYPARPRLGWRGVHVTVGDPISVSERLERYCRGRQEAKQAVTELTQDVFSFQFLSFSFPISRDPP RGEPA >Mature_484_residues SPPPHFARPPLDFIPPAYSAWVLRLVHGILPLLLRVRVRRWLPSGIAKIEATGAEILARLYHQFQEGQIRLVLAFRHVEV DDPLVGLYVLSRLVPEAARRQGIRLREPLHAHFLYDRGMPLWGGEWLGWLLSRLGGIPIRRGRRVDRVALKAARQLLLDG QFPFAIAPEGATNGHSERINPLEPGMAQLCFWCAEDLAKAGRSETVILLPIGIRYYYTDPSWTKLERLLARLEHLSGLTP PKPEPRSSRSPNLRYTQRICRLAQHLLGQLEAFYDLPPFVSERDDKEPPLEQRLAPGHFNARLGRLLHKALETAETYFGL SPQGDWNSRCRRIEEVAWIQIYREELRHPGSLSPLQRGLLDWKAHQATLYLQHMRLVESCVAVQEEYLLSKPSFERLAET ALILFDVLARLRGESYPARPRLGWRGVHVTVGDPISVSERLERYCRGRQEAKQAVTELTQDVFSFQFLSFSFPISRDPPR GEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55542; Mature: 55411
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPPHFARPPLDFIPPAYSAWVLRLVHGILPLLLRVRVRRWLPSGIAKIEATGAEILAR CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LYHQFQEGQIRLVLAFRHVEVDDPLVGLYVLSRLVPEAARRQGIRLREPLHAHFLYDRGM HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC PLWGGEWLGWLLSRLGGIPIRRGRRVDRVALKAARQLLLDGQFPFAIAPEGATNGHSERI CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCC NPLEPGMAQLCFWCAEDLAKAGRSETVILLPIGIRYYYTDPSWTKLERLLARLEHLSGLT CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEECCCCHHHHHHHHHHHHHHCCCC PPKPEPRSSRSPNLRYTQRICRLAQHLLGQLEAFYDLPPFVSERDDKEPPLEQRLAPGHF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCH NARLGRLLHKALETAETYFGLSPQGDWNSRCRRIEEVAWIQIYREELRHPGSLSPLQRGL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LDWKAHQATLYLQHMRLVESCVAVQEEYLLSKPSFERLAETALILFDVLARLRGESYPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PRLGWRGVHVTVGDPISVSERLERYCRGRQEAKQAVTELTQDVFSFQFLSFSFPISRDPP CCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC RGEPA CCCCC >Mature Secondary Structure SPPPHFARPPLDFIPPAYSAWVLRLVHGILPLLLRVRVRRWLPSGIAKIEATGAEILAR CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LYHQFQEGQIRLVLAFRHVEVDDPLVGLYVLSRLVPEAARRQGIRLREPLHAHFLYDRGM HHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC PLWGGEWLGWLLSRLGGIPIRRGRRVDRVALKAARQLLLDGQFPFAIAPEGATNGHSERI CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCC NPLEPGMAQLCFWCAEDLAKAGRSETVILLPIGIRYYYTDPSWTKLERLLARLEHLSGLT CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEECCCCHHHHHHHHHHHHHHCCCC PPKPEPRSSRSPNLRYTQRICRLAQHLLGQLEAFYDLPPFVSERDDKEPPLEQRLAPGHF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCH NARLGRLLHKALETAETYFGLSPQGDWNSRCRRIEEVAWIQIYREELRHPGSLSPLQRGL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LDWKAHQATLYLQHMRLVESCVAVQEEYLLSKPSFERLAETALILFDVLARLRGESYPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PRLGWRGVHVTVGDPISVSERLERYCRGRQEAKQAVTELTQDVFSFQFLSFSFPISRDPP CCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC RGEPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA