Click here to switch to the map view.

The map label for this gene is yufO [H]

Identifier: 86608957

GI number: 86608957

Start: 1566148

End: 1566420

Strand: Reverse

Name: yufO [H]

Synonym: CYB_1489

Alternate gene names: 86608957

Gene position: 1566420-1566148 (Counterclockwise)

Preceding gene: 86608958

Following gene: 86608946

Centisome position: 51.41

GC content: 61.17

Gene sequence:

>273_bases
ATGTATCAGCTTTCCTGTGGATCCAAGGTGCTGGTGGCTGCCCAGCCGACGCGGGGGGTGGATGTGGGGGCCATCGAGGC
CATTCATCGCCGCATCCTGCAGGCACGGGATCAGGGCATGGGGGTGCTGCTGGTATCGGCGGATTTGAATGAGGTGATCA
GCTTGTCGGATCGCATTTTGGTGATCCATGAGGGCCGCCTGGTAGGAGAACTCAGGCCTGAAGAGGCCACCGAAGAGCGG
ATCGGGCTGCTGATGGGCGGGATCCAGCATTAG

Upstream 100 bases:

>100_bases
CGCCATTCTGTTTGGACTCCGTCCCGCTAACGCGAATGGAAACAAACAGAATGCTATCGCTGCATAGTTGAACAGTGATG
TTCAGCAGTGTTCAGCGTAA

Downstream 100 bases:

>100_bases
ACGAGGCTGGGGGCAGCTTGAGAAGACCCTGCCGCCCGTTCTTGGGCTAGGGCTGCTCGCCGTTGCTCCAACTCTTGAGG
AGAGATGCGCCCATAGGTCA

Product: carbohydrate ABC transporter ATP-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MYQLSCGSKVLVAAQPTRGVDVGAIEAIHRRILQARDQGMGVLLVSADLNEVISLSDRILVIHEGRLVGELRPEEATEER
IGLLMGGIQH

Sequences:

>Translated_90_residues
MYQLSCGSKVLVAAQPTRGVDVGAIEAIHRRILQARDQGMGVLLVSADLNEVISLSDRILVIHEGRLVGELRPEEATEER
IGLLMGGIQH
>Mature_90_residues
MYQLSCGSKVLVAAQPTRGVDVGAIEAIHRRILQARDQGMGVLLVSADLNEVISLSDRILVIHEGRLVGELRPEEATEER
IGLLMGGIQH

Specific function: Part Of The Binding-Protein-Dependent Transport System For Ribose. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG3845

COG function: function code R; ABC-type uncharacterized transport systems, ATPase components

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1790190, Length=71, Percent_Identity=50.7042253521127, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI1789991, Length=73, Percent_Identity=42.4657534246575, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1788210, Length=77, Percent_Identity=45.4545454545455, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=79, Percent_Identity=41.7721518987342, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 9771; Mature: 9771

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLSCGSKVLVAAQPTRGVDVGAIEAIHRRILQARDQGMGVLLVSADLNEVISLSDRIL
CEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCEE
VIHEGRLVGELRPEEATEERIGLLMGGIQH
EEECCEEEECCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYQLSCGSKVLVAAQPTRGVDVGAIEAIHRRILQARDQGMGVLLVSADLNEVISLSDRIL
CEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCEE
VIHEGRLVGELRPEEATEERIGLLMGGIQH
EEECCEEEECCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]