| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is surE [C]
Identifier: 86608896
GI number: 86608896
Start: 1497843
End: 1498625
Strand: Reverse
Name: surE [C]
Synonym: CYB_1427
Alternate gene names: 86608896
Gene position: 1498625-1497843 (Counterclockwise)
Preceding gene: 86608898
Following gene: 86608894
Centisome position: 49.19
GC content: 63.09
Gene sequence:
>783_bases ATGAAGGTATTGCTGACCAACGATGACGGCATCGAGGCTGCCGGGCTGGCCAACCTCAAGTTGGCCCTCAGCGCCCTCAT CCCGGAAGAACACTGTTGGATTGTGGCCCCCCACCAACCGATTTCCGGCTGCAGCCACCAGGTGACGACGGGGCGACCTT TTCGAGCCTTGGCCCGCGGCGAGCGCACCTTTGCCGTCGAGGGATCCCCTGCCGACTGTGTGCGGGTGGCCCTATTCAAG CTGGCCCCAGCGGTGGATTGGGTGCTTTCCGGTATCAACGAGGGGGGAAATCTTGGATCGGATGTGTATCTGTCGGGAAC GGTGGCGGCGGTACGGGAAGCAGCGATGCGCGGGATCCCGGGAATTGCCATTTCCCAATACCGAGCAGGGGGCCAACCCA TCGACTGGGAGCAAGCCCAGCGGTGGACGCGGGAAATCTTGGCGGAGCTGATGGAACAATCCCTGCCCAGGGGGGCGTTT TGGAATGTGAACCTGCCTCACTTGCCCGCCGGATCCCCTCTGCCGGAGCGGGTTTATTGTCCCCTCTGCACCCAACCCCT GCCGCTCGATTATGCGGTGGAAGCCGAGGGAAATGGGGCAGAGTCGCTGTGGTTTCGCTATCAGGGCCGCTATGCGGAGC GCGCTCGGGATCCCCAAACCGATACCGACATCTGCTTCTCCGGTCGGGTGGCCATCACCCAAGTGCAACTGGCCTCAGGC GTTTCCGCTGGGGGGGGTAGAAGCCAGGTTGCGGGCAATGGTTCTCAGCCGTTGCAGCCGTAG
Upstream 100 bases:
>100_bases CGGGATCCACATCGCTTTTGCACCCAAGATCTCCAGATTTGCCACTGGGACTTGCAAAAGGACTCACCCAAGAAGTTGCC GGCAGAAGGGAAAAGTAGGA
Downstream 100 bases:
>100_bases CGCCGTCAGGATATCGGTGGGATCCAGCTTCAGAACCTGTTCTATGGCATCTGCCAGGTGTTGAGCGGCCTCCTGTCGGG TGTAGCCGCGAAACTGAGCA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKVLLTNDDGIEAAGLANLKLALSALIPEEHCWIVAPHQPISGCSHQVTTGRPFRALARGERTFAVEGSPADCVRVALFK LAPAVDWVLSGINEGGNLGSDVYLSGTVAAVREAAMRGIPGIAISQYRAGGQPIDWEQAQRWTREILAELMEQSLPRGAF WNVNLPHLPAGSPLPERVYCPLCTQPLPLDYAVEAEGNGAESLWFRYQGRYAERARDPQTDTDICFSGRVAITQVQLASG VSAGGGRSQVAGNGSQPLQP
Sequences:
>Translated_260_residues MKVLLTNDDGIEAAGLANLKLALSALIPEEHCWIVAPHQPISGCSHQVTTGRPFRALARGERTFAVEGSPADCVRVALFK LAPAVDWVLSGINEGGNLGSDVYLSGTVAAVREAAMRGIPGIAISQYRAGGQPIDWEQAQRWTREILAELMEQSLPRGAF WNVNLPHLPAGSPLPERVYCPLCTQPLPLDYAVEAEGNGAESLWFRYQGRYAERARDPQTDTDICFSGRVAITQVQLASG VSAGGGRSQVAGNGSQPLQP >Mature_260_residues MKVLLTNDDGIEAAGLANLKLALSALIPEEHCWIVAPHQPISGCSHQVTTGRPFRALARGERTFAVEGSPADCVRVALFK LAPAVDWVLSGINEGGNLGSDVYLSGTVAAVREAAMRGIPGIAISQYRAGGQPIDWEQAQRWTREILAELMEQSLPRGAF WNVNLPHLPAGSPLPERVYCPLCTQPLPLDYAVEAEGNGAESLWFRYQGRYAERARDPQTDTDICFSGRVAITQVQLASG VSAGGGRSQVAGNGSQPLQP
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=171, Percent_Identity=38.0116959064327, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27842; Mature: 27842
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLTNDDGIEAAGLANLKLALSALIPEEHCWIVAPHQPISGCSHQVTTGRPFRALARG CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCC ERTFAVEGSPADCVRVALFKLAPAVDWVLSGINEGGNLGSDVYLSGTVAAVREAAMRGIP CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHCCC GIAISQYRAGGQPIDWEQAQRWTREILAELMEQSLPRGAFWNVNLPHLPAGSPLPERVYC CCEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEC PLCTQPLPLDYAVEAEGNGAESLWFRYQGRYAERARDPQTDTDICFSGRVAITQVQLASG CCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHCCCCCCCCCEEECCCEEEEEEEHHCC VSAGGGRSQVAGNGSQPLQP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVLLTNDDGIEAAGLANLKLALSALIPEEHCWIVAPHQPISGCSHQVTTGRPFRALARG CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCC ERTFAVEGSPADCVRVALFKLAPAVDWVLSGINEGGNLGSDVYLSGTVAAVREAAMRGIP CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHCCC GIAISQYRAGGQPIDWEQAQRWTREILAELMEQSLPRGAFWNVNLPHLPAGSPLPERVYC CCEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEC PLCTQPLPLDYAVEAEGNGAESLWFRYQGRYAERARDPQTDTDICFSGRVAITQVQLASG CCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHCCCCCCCCCEEECCCEEEEEEEHHCC VSAGGGRSQVAGNGSQPLQP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]