| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608844
Identifier: 86608844
GI number: 86608844
Start: 1440739
End: 1441284
Strand: Direct
Name: 86608844
Synonym: CYB_1370
Alternate gene names: NA
Gene position: 1440739-1441284 (Clockwise)
Preceding gene: 86608843
Following gene: 86608847
Centisome position: 47.29
GC content: 60.44
Gene sequence:
>546_bases GTGCTGCTGGAACGGCTGCCGGGCGATGTGGTGGATACCCTGCAGGTGATGGAGGTGGTGCGCAGTGCGGTGGAAGCCTC TCTGCTGCAAGGGTTGCGCAAGGTCAACGTTTACCTTTGGTGCCGCGGACAAACCGAAGAAGCGCCGGAGTGGAGCGAAA GCTTTGCTGTAGAGCCATTGGTCTTGGCCCACCACAAGGAGCTCCGAAGCCTTGCTTTCAACTATCGACAAGACTATCCC GGCATGCGGGTGCTGTTTTTCTGCCTGGGCCTTTGTCTGGGCGGCTTTTACCTGTTGGGGGGCTGGGAGCAGACAGGTTG GATCGATTGGATCCCCGTAGGACTGGCCTTCGCCTTGGGGGTGATCTTCCCCTGGCTCAAACGCTCCCTCAGCCAGTTTG TACACCCTCTATTTCTCCGCCTTGGCCTGGGCTTGGGCTTGGTCTTATTGGGCCTGGCAGTGGCGCTGATCTGGCGGCAG GGCTGGAGCGTTGCCTATGGGATCCTCGGCCTCCTGGCCATCCTCCTGTTGGGTCTGGGAGCCTAG
Upstream 100 bases:
>100_bases CATGCGCCGCCAGCTCAAAATCTTGAACCAAATCCTCGATTACAAGCTTGCCAACTTGCGGCTGTTTGGCCGAGCCGAGC TGAAGGGGCCTGTTCTCAAC
Downstream 100 bases:
>100_bases TTCTCAACCGGCAGTGGTGCCGCTGAAGACGTGTAGGGCAGGGCCGGTCATCCACACGTGCTGTGTGCTCGGATCCCAGC GAATTTCCAGATTTCCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLLERLPGDVVDTLQVMEVVRSAVEASLLQGLRKVNVYLWCRGQTEEAPEWSESFAVEPLVLAHHKELRSLAFNYRQDYP GMRVLFFCLGLCLGGFYLLGGWEQTGWIDWIPVGLAFALGVIFPWLKRSLSQFVHPLFLRLGLGLGLVLLGLAVALIWRQ GWSVAYGILGLLAILLLGLGA
Sequences:
>Translated_181_residues MLLERLPGDVVDTLQVMEVVRSAVEASLLQGLRKVNVYLWCRGQTEEAPEWSESFAVEPLVLAHHKELRSLAFNYRQDYP GMRVLFFCLGLCLGGFYLLGGWEQTGWIDWIPVGLAFALGVIFPWLKRSLSQFVHPLFLRLGLGLGLVLLGLAVALIWRQ GWSVAYGILGLLAILLLGLGA >Mature_181_residues MLLERLPGDVVDTLQVMEVVRSAVEASLLQGLRKVNVYLWCRGQTEEAPEWSESFAVEPLVLAHHKELRSLAFNYRQDYP GMRVLFFCLGLCLGGFYLLGGWEQTGWIDWIPVGLAFALGVIFPWLKRSLSQFVHPLFLRLGLGLGLVLLGLAVALIWRQ GWSVAYGILGLLAILLLGLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20165; Mature: 20165
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLERLPGDVVDTLQVMEVVRSAVEASLLQGLRKVNVYLWCRGQTEEAPEWSESFAVEPL CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHCCCHH VLAHHKELRSLAFNYRQDYPGMRVLFFCLGLCLGGFYLLGGWEQTGWIDWIPVGLAFALG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VIFPWLKRSLSQFVHPLFLRLGLGLGLVLLGLAVALIWRQGWSVAYGILGLLAILLLGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure MLLERLPGDVVDTLQVMEVVRSAVEASLLQGLRKVNVYLWCRGQTEEAPEWSESFAVEPL CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHCCCHH VLAHHKELRSLAFNYRQDYPGMRVLFFCLGLCLGGFYLLGGWEQTGWIDWIPVGLAFALG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VIFPWLKRSLSQFVHPLFLRLGLGLGLVLLGLAVALIWRQGWSVAYGILGLLAILLLGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA