| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608829
Identifier: 86608829
GI number: 86608829
Start: 1423513
End: 1425348
Strand: Reverse
Name: 86608829
Synonym: CYB_1355
Alternate gene names: NA
Gene position: 1425348-1423513 (Counterclockwise)
Preceding gene: 86608833
Following gene: 86608826
Centisome position: 46.78
GC content: 62.31
Gene sequence:
>1836_bases ATGATCTCTTCCTTATTGTCCTTACTGCCTATTGGTCTGCAGAAATCCGGCGAACACCAATCTACAGCAGTCCTGCCCGG CCTGCGGGCGCAGCGCCATCGTTCTGCAATGCTGACGCGGCTGGCAACCTCTCTGATGCTTGGCACCACCTTACTGCTGA CAGCAAAGTTGGATCCCGGCTGGGCGCAAACTTCCCTGGACACCGGCATTACCGGTGAGCAGACCCTGCCTCAAGCTCCC CCTCTCCCGGACAATCGCCCGGCCATTTTTGTGGATGCAGCCAACGGCAGCGATACCCGTGGGGATGGATCCCGCAATAA CCCCTTCAAGACGATTACTTATGCCATTCAGCGGGCTGAGGCTGGCAGCGTCATTCAGCTTTTTCCTGGGGTGTATAGCG AGGAGAGCGGCGAAACCTTCCCCATCCGTCTGAAAGCCGGCCTCACCTTGCGTGGGGACGAGTCCACCTTGGGAGAGGGC TATCTCATCACCGGCGGCGGTACCTACATGAGCCCGACCCTAGGCCGACAAAATGTTGCTCTGCTGGCAGAGACCGGCGC AGAAGTGCGAGGAATTACCCTGCGCAACCAGGGGCGGCGCGGCTATGCCCTCTGGGTGGAATCTGCCTCCCCGCGCATTC TCAACAACAGCTTTGTGGGCAGCATCCACGATGGGATCTTCATTGCCGGCGCTGCCAATCCCTGGGTGGAGGGCAACCGC TTCTATAAAAACGGGGCCAACGGCATTTCCGTCTTGGGCACCTCCCAGCCCACCATCATCAATAACCTGTTCCAGGAGAC CGGCTTTGGCATCACCATCGACCAGCGCTCGGCGCCTATTGTGCGCAACAACCGCATCCTGCAGAACCGTACCGGCGTGA TCGTCGGGGGCAGCTCCAGGCCCATCCTGCGCAACAATCTCATCGCCCAGAACTTGGAGACCGGCCTCACCGCCATCACC ACTGCCCAGCCGGATTTGGGCACGGCCACGGATCCCGGCAACAACATCTTTGAGGGCAACGGCCAATACGATATCAACAA CGCCACCCGCGGCCTGCGCCTCAATGCCAACGGCAACCAACTGCGGGGCAAAGCCAAAGGGGATCTGGATCTGTCCGGTC AAACCACCGTTGCCGCCCTTCCCGACAGCGCTCCCCGCCCCATTGCCCCTGGCACTTTGGCTCTGCCCAGCGCTCCGGCC CAGCCGGCTACTCCCAGGGATCCCCGGCCAGCGGCTGAGACCCCCTCCACCTTGCCGGTTTTAACGGTGCCCCAGTCTAC TGCCCCGGTTCCCCCCTCTCCGCCCCAAGGATCCGGAGGGCGCATCTTGCCAGATCCCTCCAGCCCTCAGGCAACTCCCC AGCCCCAACCTCCGGGGGAGCAGTTTGTGGCTGTCCCCTTCACCCCCGATGGCTCTACCACACCTGCCCAGCCGGCTGAC CCTGCCCCCGCAGCTCCTGTTCCCAGGCCACCCTCGGCTCCCCTCACAGATATCACCACCCTTCTGCCCCCGCCGGCCCG TCGCTCATCGGCAGGGATCCCGGCCACTCCCTCTGCTCCCACTACAACTCCAGTTGCCCCCCCTGTGGTTGCTGTGGGTA ACGACTCCGTTTCGCCAACGCGAACGGCAACTCAATTTCGCGTGTTGGTGACCCCCAAGAGCAGCGATGACTTGAACCGA TTGCGGCAGCTCATCCCCGAGGCGGTGGAAACGGTTTTCAACGGCAGAACAGTGTTGCAGGCGGGCCTGTACGACAGTCG CAGCCAGGCCCAGTCGGTCTTGGATCGGCTGTTGGATGCCGGCTTTGAGGCGGTTGCCGAGATGATTTTCCGCTAG
Upstream 100 bases:
>100_bases TATTTGGAGTTGGCGGATAGGGCAGGATCCCGCCTACTCAGTTTGGTAGGATAACCTCGGCCTTTCTTCTCTAGCCCAGC CTGGTGTGAGGATAACCACC
Downstream 100 bases:
>100_bases CGACCCCCCACACTGCCGGCTTGCTTCTCCATAGCGGTACGAGGGAGCTTTGATCCCAGTTCTTTGGCGGGGTGGCCAGC CATTGAGCCCAAGTCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MISSLLSLLPIGLQKSGEHQSTAVLPGLRAQRHRSAMLTRLATSLMLGTTLLLTAKLDPGWAQTSLDTGITGEQTLPQAP PLPDNRPAIFVDAANGSDTRGDGSRNNPFKTITYAIQRAEAGSVIQLFPGVYSEESGETFPIRLKAGLTLRGDESTLGEG YLITGGGTYMSPTLGRQNVALLAETGAEVRGITLRNQGRRGYALWVESASPRILNNSFVGSIHDGIFIAGAANPWVEGNR FYKNGANGISVLGTSQPTIINNLFQETGFGITIDQRSAPIVRNNRILQNRTGVIVGGSSRPILRNNLIAQNLETGLTAIT TAQPDLGTATDPGNNIFEGNGQYDINNATRGLRLNANGNQLRGKAKGDLDLSGQTTVAALPDSAPRPIAPGTLALPSAPA QPATPRDPRPAAETPSTLPVLTVPQSTAPVPPSPPQGSGGRILPDPSSPQATPQPQPPGEQFVAVPFTPDGSTTPAQPAD PAPAAPVPRPPSAPLTDITTLLPPPARRSSAGIPATPSAPTTTPVAPPVVAVGNDSVSPTRTATQFRVLVTPKSSDDLNR LRQLIPEAVETVFNGRTVLQAGLYDSRSQAQSVLDRLLDAGFEAVAEMIFR
Sequences:
>Translated_611_residues MISSLLSLLPIGLQKSGEHQSTAVLPGLRAQRHRSAMLTRLATSLMLGTTLLLTAKLDPGWAQTSLDTGITGEQTLPQAP PLPDNRPAIFVDAANGSDTRGDGSRNNPFKTITYAIQRAEAGSVIQLFPGVYSEESGETFPIRLKAGLTLRGDESTLGEG YLITGGGTYMSPTLGRQNVALLAETGAEVRGITLRNQGRRGYALWVESASPRILNNSFVGSIHDGIFIAGAANPWVEGNR FYKNGANGISVLGTSQPTIINNLFQETGFGITIDQRSAPIVRNNRILQNRTGVIVGGSSRPILRNNLIAQNLETGLTAIT TAQPDLGTATDPGNNIFEGNGQYDINNATRGLRLNANGNQLRGKAKGDLDLSGQTTVAALPDSAPRPIAPGTLALPSAPA QPATPRDPRPAAETPSTLPVLTVPQSTAPVPPSPPQGSGGRILPDPSSPQATPQPQPPGEQFVAVPFTPDGSTTPAQPAD PAPAAPVPRPPSAPLTDITTLLPPPARRSSAGIPATPSAPTTTPVAPPVVAVGNDSVSPTRTATQFRVLVTPKSSDDLNR LRQLIPEAVETVFNGRTVLQAGLYDSRSQAQSVLDRLLDAGFEAVAEMIFR >Mature_611_residues MISSLLSLLPIGLQKSGEHQSTAVLPGLRAQRHRSAMLTRLATSLMLGTTLLLTAKLDPGWAQTSLDTGITGEQTLPQAP PLPDNRPAIFVDAANGSDTRGDGSRNNPFKTITYAIQRAEAGSVIQLFPGVYSEESGETFPIRLKAGLTLRGDESTLGEG YLITGGGTYMSPTLGRQNVALLAETGAEVRGITLRNQGRRGYALWVESASPRILNNSFVGSIHDGIFIAGAANPWVEGNR FYKNGANGISVLGTSQPTIINNLFQETGFGITIDQRSAPIVRNNRILQNRTGVIVGGSSRPILRNNLIAQNLETGLTAIT TAQPDLGTATDPGNNIFEGNGQYDINNATRGLRLNANGNQLRGKAKGDLDLSGQTTVAALPDSAPRPIAPGTLALPSAPA QPATPRDPRPAAETPSTLPVLTVPQSTAPVPPSPPQGSGGRILPDPSSPQATPQPQPPGEQFVAVPFTPDGSTTPAQPAD PAPAAPVPRPPSAPLTDITTLLPPPARRSSAGIPATPSAPTTTPVAPPVVAVGNDSVSPTRTATQFRVLVTPKSSDDLNR LRQLIPEAVETVFNGRTVLQAGLYDSRSQAQSVLDRLLDAGFEAVAEMIFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63961; Mature: 63961
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSLLSLLPIGLQKSGEHQSTAVLPGLRAQRHRSAMLTRLATSLMLGTTLLLTAKLDPG CHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCC WAQTSLDTGITGEQTLPQAPPLPDNRPAIFVDAANGSDTRGDGSRNNPFKTITYAIQRAE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCC AGSVIQLFPGVYSEESGETFPIRLKAGLTLRGDESTLGEGYLITGGGTYMSPTLGRQNVA CCCEEEECCCCCCCCCCCEEEEEEEECEEEECCCCCCCCCEEEECCCCEECCCCCCCCEE LLAETGAEVRGITLRNQGRRGYALWVESASPRILNNSFVGSIHDGIFIAGAANPWVEGNR EEEECCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCEECCCCEEEEECCCCCCCCCC FYKNGANGISVLGTSQPTIINNLFQETGFGITIDQRSAPIVRNNRILQNRTGVIVGGSSR EEECCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCEEECCEEEECCCEEEECCCCC PILRNNLIAQNLETGLTAITTAQPDLGTATDPGNNIFEGNGQYDINNATRGLRLNANGNQ CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCEEECCCCCCEEECCCCCE LRGKAKGDLDLSGQTTVAALPDSAPRPIAPGTLALPSAPAQPATPRDPRPAAETPSTLPV ECCCCCCCEECCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEE LTVPQSTAPVPPSPPQGSGGRILPDPSSPQATPQPQPPGEQFVAVPFTPDGSTTPAQPAD EECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC PAPAAPVPRPPSAPLTDITTLLPPPARRSSAGIPATPSAPTTTPVAPPVVAVGNDSVSPT CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC RTATQFRVLVTPKSSDDLNRLRQLIPEAVETVFNGRTVLQAGLYDSRSQAQSVLDRLLDA CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH GFEAVAEMIFR HHHHHHHHHCC >Mature Secondary Structure MISSLLSLLPIGLQKSGEHQSTAVLPGLRAQRHRSAMLTRLATSLMLGTTLLLTAKLDPG CHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCC WAQTSLDTGITGEQTLPQAPPLPDNRPAIFVDAANGSDTRGDGSRNNPFKTITYAIQRAE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCC AGSVIQLFPGVYSEESGETFPIRLKAGLTLRGDESTLGEGYLITGGGTYMSPTLGRQNVA CCCEEEECCCCCCCCCCCEEEEEEEECEEEECCCCCCCCCEEEECCCCEECCCCCCCCEE LLAETGAEVRGITLRNQGRRGYALWVESASPRILNNSFVGSIHDGIFIAGAANPWVEGNR EEEECCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCEECCCCEEEEECCCCCCCCCC FYKNGANGISVLGTSQPTIINNLFQETGFGITIDQRSAPIVRNNRILQNRTGVIVGGSSR EEECCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCEEECCEEEECCCEEEECCCCC PILRNNLIAQNLETGLTAITTAQPDLGTATDPGNNIFEGNGQYDINNATRGLRLNANGNQ CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCEEECCCCCCEEECCCCCE LRGKAKGDLDLSGQTTVAALPDSAPRPIAPGTLALPSAPAQPATPRDPRPAAETPSTLPV ECCCCCCCEECCCCEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEE LTVPQSTAPVPPSPPQGSGGRILPDPSSPQATPQPQPPGEQFVAVPFTPDGSTTPAQPAD EECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC PAPAAPVPRPPSAPLTDITTLLPPPARRSSAGIPATPSAPTTTPVAPPVVAVGNDSVSPT CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC RTATQFRVLVTPKSSDDLNRLRQLIPEAVETVFNGRTVLQAGLYDSRSQAQSVLDRLLDA CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH GFEAVAEMIFR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA