| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608792
Identifier: 86608792
GI number: 86608792
Start: 1379591
End: 1380676
Strand: Reverse
Name: 86608792
Synonym: CYB_1318
Alternate gene names: NA
Gene position: 1380676-1379591 (Counterclockwise)
Preceding gene: 86608794
Following gene: 86608791
Centisome position: 45.32
GC content: 60.59
Gene sequence:
>1086_bases ATGGGATCCCCTAGAGCCGCTCTCCCCTCTCCTACCCCCCAGCCCACCCCCACCGTCGTCCCCCATCCAGATGCCCCCCA TGGCCTCTACATCCCCCCCCGCCGAGATCTGCGCCTCTTGGTCATCAGTGACATGAACGGCATCTACGGCTCGGTGGAAT ACGACCCAGAGGTGGATCGGGGCATCGGCCTCATCCCCTATCTTCAGCCGGATATTGTTTTGGGAGGAGGAGATATGGTG GCCGGTCAGGATCCCCGCCTCTCGGAGGAGCGCATCCGGGCCATGTGGGCAGCCTTCGACCGGCATGTGGCCGGCCCAAT CCGTGCGGCCAAACTCCCCTATGGCTTCACGCTGGGCAACCACGATGCTTCCTGTGCCCGCACCACCCGGGGCGGCTTTC TCTTTCAAAAAGAACGGGATCTGGCCCGCGAGTTTTGGAACGATCCGGCCCACGACCCAGGTTTGAACTTTGTGGATCGG GGGGACTTTCCCTTCTACTACACCTTTGAAAAAGACGATGTGTTTTACCTAGTCTGGGATGCCACCTGCAATTACATCCC GCCCGAACAAATGGCCTGGGCGGAAGCGGCTCTGGCCAGCGAACGGGCTCAGAAGGCCAAGTTGCGCATTGTCATCGGCC ATCTGCCCCTCTACGCCATCACTGTCGGGCGCGACGATCCGGGAGAAGTGCTGCTGGAGGCGGATGCCAAACGGGCTCTG CTGGAGAAGTACCGCGTCCACACCTACATCAGCGGCCACGACCACGGCTACTACCCTGGCCACAAAGGGCAACTGCAACT GCTTCACTGCGGCATTCTCGGCTCTGGCCCTCGTCCTCTCTTGGGCAGCCCTCTGCCCCCCCGCAAGACCCTCACCCTTA TCGACGTGGATTTCGAGAGCCCAGATGTTACCTATTACACTACCTATCACATGCGGGATCTGAGCGTGATCGACCAAGCA GAGCTGCCCCGTTTCATCACTGGGCACAATGGCTTGGTGCTGCGCCGCGACGTCAATTGGGACAACCTCACCCCCCAAGA AATCGCCACCTGCCAAGCTCGTATTGGATCCCTGTGTCGGGATTAA
Upstream 100 bases:
>100_bases GCGCAAGGTAATTCTGGGTTTGTTGGGGTTGGCCAGCAGCAGTGGATTGGCAGGAGCCTATTGGGCCAGTCGGCAGCAGC CCTCTCATCTAGCCCCAGGG
Downstream 100 bases:
>100_bases CGTCTCCGTCTTGGCAAAAGATTGATGAGCCGTTTGTAGATGCTCTCGCGAGGGTTCTGCACACTTCGCGAGCAGCCCAG GCTTTTCAACAGATGATTCA
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Specific Protein Phosphatase; Secreted Phosphohydrolase; Phosphohydrolase; Phosphoesterase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MGSPRAALPSPTPQPTPTVVPHPDAPHGLYIPPRRDLRLLVISDMNGIYGSVEYDPEVDRGIGLIPYLQPDIVLGGGDMV AGQDPRLSEERIRAMWAAFDRHVAGPIRAAKLPYGFTLGNHDASCARTTRGGFLFQKERDLAREFWNDPAHDPGLNFVDR GDFPFYYTFEKDDVFYLVWDATCNYIPPEQMAWAEAALASERAQKAKLRIVIGHLPLYAITVGRDDPGEVLLEADAKRAL LEKYRVHTYISGHDHGYYPGHKGQLQLLHCGILGSGPRPLLGSPLPPRKTLTLIDVDFESPDVTYYTTYHMRDLSVIDQA ELPRFITGHNGLVLRRDVNWDNLTPQEIATCQARIGSLCRD
Sequences:
>Translated_361_residues MGSPRAALPSPTPQPTPTVVPHPDAPHGLYIPPRRDLRLLVISDMNGIYGSVEYDPEVDRGIGLIPYLQPDIVLGGGDMV AGQDPRLSEERIRAMWAAFDRHVAGPIRAAKLPYGFTLGNHDASCARTTRGGFLFQKERDLAREFWNDPAHDPGLNFVDR GDFPFYYTFEKDDVFYLVWDATCNYIPPEQMAWAEAALASERAQKAKLRIVIGHLPLYAITVGRDDPGEVLLEADAKRAL LEKYRVHTYISGHDHGYYPGHKGQLQLLHCGILGSGPRPLLGSPLPPRKTLTLIDVDFESPDVTYYTTYHMRDLSVIDQA ELPRFITGHNGLVLRRDVNWDNLTPQEIATCQARIGSLCRD >Mature_360_residues GSPRAALPSPTPQPTPTVVPHPDAPHGLYIPPRRDLRLLVISDMNGIYGSVEYDPEVDRGIGLIPYLQPDIVLGGGDMVA GQDPRLSEERIRAMWAAFDRHVAGPIRAAKLPYGFTLGNHDASCARTTRGGFLFQKERDLAREFWNDPAHDPGLNFVDRG DFPFYYTFEKDDVFYLVWDATCNYIPPEQMAWAEAALASERAQKAKLRIVIGHLPLYAITVGRDDPGEVLLEADAKRALL EKYRVHTYISGHDHGYYPGHKGQLQLLHCGILGSGPRPLLGSPLPPRKTLTLIDVDFESPDVTYYTTYHMRDLSVIDQAE LPRFITGHNGLVLRRDVNWDNLTPQEIATCQARIGSLCRD
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40362; Mature: 40231
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPRAALPSPTPQPTPTVVPHPDAPHGLYIPPRRDLRLLVISDMNGIYGSVEYDPEVDR CCCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCC GIGLIPYLQPDIVLGGGDMVAGQDPRLSEERIRAMWAAFDRHVAGPIRAAKLPYGFTLGN CCEECCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEECC HDASCARTTRGGFLFQKERDLAREFWNDPAHDPGLNFVDRGDFPFYYTFEKDDVFYLVWD CCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEEE ATCNYIPPEQMAWAEAALASERAQKAKLRIVIGHLPLYAITVGRDDPGEVLLEADAKRAL CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCEEEECHHHHHH LEKYRVHTYISGHDHGYYPGHKGQLQLLHCGILGSGPRPLLGSPLPPRKTLTLIDVDFES HHHHHEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCC PDVTYYTTYHMRDLSVIDQAELPRFITGHNGLVLRRDVNWDNLTPQEIATCQARIGSLCR CCEEEEEEEEEECCCHHCHHCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC D C >Mature Secondary Structure GSPRAALPSPTPQPTPTVVPHPDAPHGLYIPPRRDLRLLVISDMNGIYGSVEYDPEVDR CCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCC GIGLIPYLQPDIVLGGGDMVAGQDPRLSEERIRAMWAAFDRHVAGPIRAAKLPYGFTLGN CCEECCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEECC HDASCARTTRGGFLFQKERDLAREFWNDPAHDPGLNFVDRGDFPFYYTFEKDDVFYLVWD CCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEEE ATCNYIPPEQMAWAEAALASERAQKAKLRIVIGHLPLYAITVGRDDPGEVLLEADAKRAL CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCCCEEEECHHHHHH LEKYRVHTYISGHDHGYYPGHKGQLQLLHCGILGSGPRPLLGSPLPPRKTLTLIDVDFES HHHHHEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCC PDVTYYTTYHMRDLSVIDQAELPRFITGHNGLVLRRDVNWDNLTPQEIATCQARIGSLCR CCEEEEEEEEEECCCHHCHHCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA