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The map label for this gene is yeaW [H]

Identifier: 86608743

GI number: 86608743

Start: 1324328

End: 1325515

Strand: Reverse

Name: yeaW [H]

Synonym: CYB_1267

Alternate gene names: 86608743

Gene position: 1325515-1324328 (Counterclockwise)

Preceding gene: 86608744

Following gene: 86608742

Centisome position: 43.51

GC content: 58.16

Gene sequence:

>1188_bases
TTGGATAGCAAAGCCTCTGGAGTCCCACAGCAGTTTTTCTTATCGCTGCTTTGCCCCATGACCGCTTTCTATCCCGCTAC
GGTTCAACCGGGCGCCCGCACCCTGCCGGGCCACTACTACGTCTCCTCCAGCCGCTTTGAGGCGGAGATTGAGCGGATTT
TTTATCGGCAGTGGTTCTGCGTGGGGCGCAGTGCCGATCTGGCCCAACCCGGAGACTTTTTGCAGGTGCAGGTGCTCAGA
GAAAGCCTGATCCTGGTACGGGATCCCAAGGGGCAAGCCCATGCCTTCTTCAACCACTGTCGCCATCGAGGAACCCGACT
CTGCAGCGAGCTCCAAGGCCATTTTGCCGATGGGATCCCTTGCCCCTACCACGCCTGGCGCTATGGGCTGGATGGACAAT
TGTTGGCGGCTCCCCAGATGCACGAGGTGGAAGACTTTCGCCGTGAAGATTATCCCCTCCACTCCGCTGCCTTGGCAGAA
TGGGAAGGCTTCGTCTGGGTCAACCTCAGCCGCAATCCTCAGCCCTTCGATGAGGTTTTTGCCCCATTGCAAGGTCGTTT
CCGAGAGTGGAACCTGTCCGCTCTGCGGCGAGGTCATCGTATTGAATACAACGTTCAGGCCAACTGGAAATTGCTGTTTG
AAAACTACTCTGAGTGCTACCACTGCCCCCTCATTCACCCGGAATTGGCCCGTCTTTCGCCGGCTCGCAGCGGTCGCAAC
GACCTGATGGAAGGCCCCTTTTTGGGCGGCTACATGTTGCTCAACCCAGATGTGACCAGCCTAAACATGAGTGGCCAACG
CAGCTTGCCCCTGATCTCCACCGTGCGCGGAGAAAACCAACGGCGGGCCTACTACTACACCCTTATGCCCAATCTATTCT
TGAGCCTGCAGCCGGACTATGTCATGACCCACACCCTGTGGCCGCAGGGATCCGACCGGACGCGGGTTGTCTGCGATTGG
CTGTTTGAGCCGGAGACCTTGGCGCTGGATGGTTTTGATCCCAGCGAGGTGGTGGAATTGTGGGATCGCACCAATCGACA
GGATTGGCACCTGTGCGAGCTCACCCAGCAAGGGGTGGGATCCCGTGCCTATGAAGCAGGGCCTCTTTCCCATGCAGAAG
GGTTGCTGCAAGCCTTTGGGCGGGAATACCGCCGGCAGATGCAGGAGTTGGAAGAACAAAGCTGCTAA

Upstream 100 bases:

>100_bases
CGCGAGCAGCACGGCGTGCTTGGGGGGAATGCTTCAAAAATGCCTTAAAAATGCCTTGGATCTGCTTGGAATAGATGCCG
GATGGGATCCCTGCGTTAGC

Downstream 100 bases:

>100_bases
AAAAGTGTTAGGGACAGAGGGTTTTTGTTGATTGGGTTGCCGTTGGCGTTGTTAGGACGAAGTTCTTTGTAAGGTGCTTT
GGGCTGAGGTTAACCACAAT

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MDSKASGVPQQFFLSLLCPMTAFYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFCVGRSADLAQPGDFLQVQVLR
ESLILVRDPKGQAHAFFNHCRHRGTRLCSELQGHFADGIPCPYHAWRYGLDGQLLAAPQMHEVEDFRREDYPLHSAALAE
WEGFVWVNLSRNPQPFDEVFAPLQGRFREWNLSALRRGHRIEYNVQANWKLLFENYSECYHCPLIHPELARLSPARSGRN
DLMEGPFLGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQRRAYYYTLMPNLFLSLQPDYVMTHTLWPQGSDRTRVVCDW
LFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVGSRAYEAGPLSHAEGLLQAFGREYRRQMQELEEQSC

Sequences:

>Translated_395_residues
MDSKASGVPQQFFLSLLCPMTAFYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFCVGRSADLAQPGDFLQVQVLR
ESLILVRDPKGQAHAFFNHCRHRGTRLCSELQGHFADGIPCPYHAWRYGLDGQLLAAPQMHEVEDFRREDYPLHSAALAE
WEGFVWVNLSRNPQPFDEVFAPLQGRFREWNLSALRRGHRIEYNVQANWKLLFENYSECYHCPLIHPELARLSPARSGRN
DLMEGPFLGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQRRAYYYTLMPNLFLSLQPDYVMTHTLWPQGSDRTRVVCDW
LFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVGSRAYEAGPLSHAEGLLQAFGREYRRQMQELEEQSC
>Mature_395_residues
MDSKASGVPQQFFLSLLCPMTAFYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFCVGRSADLAQPGDFLQVQVLR
ESLILVRDPKGQAHAFFNHCRHRGTRLCSELQGHFADGIPCPYHAWRYGLDGQLLAAPQMHEVEDFRREDYPLHSAALAE
WEGFVWVNLSRNPQPFDEVFAPLQGRFREWNLSALRRGHRIEYNVQANWKLLFENYSECYHCPLIHPELARLSPARSGRN
DLMEGPFLGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQRRAYYYTLMPNLFLSLQPDYVMTHTLWPQGSDRTRVVCDW
LFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVGSRAYEAGPLSHAEGLLQAFGREYRRQMQELEEQSC

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=340, Percent_Identity=29.7058823529412, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1788888, Length=215, Percent_Identity=24.6511627906977, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 45644; Mature: 45644

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKASGVPQQFFLSLLCPMTAFYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFC
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHE
VGRSADLAQPGDFLQVQVLRESLILVRDPKGQAHAFFNHCRHRGTRLCSELQGHFADGIP
ECCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CPYHAWRYGLDGQLLAAPQMHEVEDFRREDYPLHSAALAEWEGFVWVNLSRNPQPFDEVF
CCHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHH
APLQGRFREWNLSALRRGHRIEYNVQANWKLLFENYSECYHCPLIHPELARLSPARSGRN
HHHHCCCCCCCHHHHHCCCEEEEEECCCEEEEEECHHHHEECCCCCHHHHHCCCCCCCCH
DLMEGPFLGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQRRAYYYTLMPNLFLSLQPDY
HHCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHEEECCCE
VMTHTLWPQGSDRTRVVCDWLFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVG
EEEEEECCCCCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCC
SRAYEAGPLSHAEGLLQAFGREYRRQMQELEEQSC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSKASGVPQQFFLSLLCPMTAFYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFC
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHE
VGRSADLAQPGDFLQVQVLRESLILVRDPKGQAHAFFNHCRHRGTRLCSELQGHFADGIP
ECCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CPYHAWRYGLDGQLLAAPQMHEVEDFRREDYPLHSAALAEWEGFVWVNLSRNPQPFDEVF
CCHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHH
APLQGRFREWNLSALRRGHRIEYNVQANWKLLFENYSECYHCPLIHPELARLSPARSGRN
HHHHCCCCCCCHHHHHCCCEEEEEECCCEEEEEECHHHHEECCCCCHHHHHCCCCCCCCH
DLMEGPFLGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQRRAYYYTLMPNLFLSLQPDY
HHCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHEEECCCE
VMTHTLWPQGSDRTRVVCDWLFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVG
EEEEEECCCCCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCC
SRAYEAGPLSHAEGLLQAFGREYRRQMQELEEQSC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]