| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is phoA [H]
Identifier: 86608674
GI number: 86608674
Start: 1242592
End: 1243941
Strand: Direct
Name: phoA [H]
Synonym: CYB_1198
Alternate gene names: 86608674
Gene position: 1242592-1243941 (Clockwise)
Preceding gene: 86608673
Following gene: 86608675
Centisome position: 40.79
GC content: 58.81
Gene sequence:
>1350_bases GTGCTAGCTACGCGTAGCTATTCTCTGAGGGCAGCGTTGGCTGCGACTGTATGCGTTTTGTCTTCTTCCGTCTTCTCCTC TAGCCTGGCTCAAGCAGCGCCTCAGCCGACCGGAAACGGGGCCATCTTCTTCCACCCGGATGGCACTTCGGCTTCTCACT GGGACATCACACGCATTCTCCACTACGGCCCCGATGGCTTTCTGAACTGGGATCGTCTTCCCGTGATTACCACCTATCGC GGGCACCTTTTCGACCAGCTTGGGGGAACTTCCAACGCCGGAGCGGTGACCCATGCCACAGGAACTCGTGCCCACGCCAA GAGCTTTGGGTTGGATCCGGACGGCAAAGAGTACTCCTCTGCCAACGGCACCCTGAACACGATCATGGAAGAGGCTGTGG CGGCAGGCTTGGGTACGGCTCTGGTGCAAACGGGATCCATCATTGAGCCGGGGACGGCTGCCTTCGTTGCCAAAGCTGCC AAGCGCAGCGACTATGAGGAGATTGCCCTGCAGGTGGTGGAGTCAGGGGTAGACATCATCCTCGGCGCTGGCGAGGAATG GCTGCTGCCGGAAGGTGTCCAGGGCCGCTTTGGCAAAGGGAAGCGCAAGGATGGCCGCAACCTGATTGAGGAGGCCAAGA AAAAGGGGTACGCCGTTGTCTACACCCGCGACGAGCTGCTCAAGCTGCCGGCAGATGTCTCCAAGGTTTTGGGGGTGTTC AACGTCGAGGACACCTTCTACGACAAGCCTGAAGAAGAGTTGCGGAAAGAAAACTTGCCCAACTACATCGCCAGCGCCCC CACCATTGCCGAGATGACCGAATTTGCCCTGGCGCGGATCTCCCGCAATCCTAAGGGCTTCTTCGCCGTCATCGAAGAAG AGGGCACTGATAACATGTGCAACAACCTCAATGCCTCTGGCTGCCTGGAGGCCATGAAGCGGGCCGACGATGCCATCGGG GTGATTCTCAACTTTATCGAGAAGAATCCCAAGACCTTCATGATTACCACCAGCGACAGCAACGCCGGCGGGATGCAGTT GGTGGATATCGAATCCGCCGAGGAGCCGCTGCCCCCTACTGACCCCAAAGGCAGTGGTGCCCCCATTGACGGAGTTGACG GCACGGGCACAAAGCCGTTTATTTCTGCTCCTGACAAGAATGGCAAGCGCTTTCCCTTTGCCGTGGCTTGGGCTACCGGA GATGACGTCGGCAGTGGAGTCATCGCTCGCGCTGCGGGCCTGAACGCTCGAGAGCTAGTGCCGGTCACTGGAATCCTGAA CACAGACATCTACCGCATTCTCTACTTCGTGCTCTTTGGGGAGCGCATCCCCAGCGAGCTGAAGCCCTAG
Upstream 100 bases:
>100_bases CACTTTGGGCACGTCGCACACTGGTAAGTTGCTCTGCTCTTGCAAACTCGTCCGAAGCTGTGTTACTTTTCTTAACGTTC AGCTTTGAACGAGCAAGAGC
Downstream 100 bases:
>100_bases TGTCTGCTGTGGTCACCTGCCTTGGGCGGGTGTTTGCCCCACAAGCTCTGTCCGTCACGGGGGATCCATCCAGTGGATCC CCTTTTTTTATGAGAACCAC
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MLATRSYSLRAALAATVCVLSSSVFSSSLAQAAPQPTGNGAIFFHPDGTSASHWDITRILHYGPDGFLNWDRLPVITTYR GHLFDQLGGTSNAGAVTHATGTRAHAKSFGLDPDGKEYSSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAKAA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDIESAEEPLPPTDPKGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLNARELVPVTGILNTDIYRILYFVLFGERIPSELKP
Sequences:
>Translated_449_residues MLATRSYSLRAALAATVCVLSSSVFSSSLAQAAPQPTGNGAIFFHPDGTSASHWDITRILHYGPDGFLNWDRLPVITTYR GHLFDQLGGTSNAGAVTHATGTRAHAKSFGLDPDGKEYSSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAKAA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDIESAEEPLPPTDPKGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLNARELVPVTGILNTDIYRILYFVLFGERIPSELKP >Mature_449_residues MLATRSYSLRAALAATVCVLSSSVFSSSLAQAAPQPTGNGAIFFHPDGTSASHWDITRILHYGPDGFLNWDRLPVITTYR GHLFDQLGGTSNAGAVTHATGTRAHAKSFGLDPDGKEYSSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAKAA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDIESAEEPLPPTDPKGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLNARELVPVTGILNTDIYRILYFVLFGERIPSELKP
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=324, Percent_Identity=28.0864197530864, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI157266292, Length=320, Percent_Identity=27.5, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI94721246, Length=320, Percent_Identity=27.1875, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI116734717, Length=317, Percent_Identity=25.8675078864353, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI294660770, Length=316, Percent_Identity=25.6329113924051, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI294660772, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI48994877, Length=348, Percent_Identity=26.1494252873563, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320689, Length=367, Percent_Identity=25.8855585831063, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585213, Length=338, Percent_Identity=26.0355029585799, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358067, Length=321, Percent_Identity=25.5451713395639, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI85725200, Length=328, Percent_Identity=24.6951219512195, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI85815833, Length=328, Percent_Identity=24.6951219512195, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 47907; Mature: 47907
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATRSYSLRAALAATVCVLSSSVFSSSLAQAAPQPTGNGAIFFHPDGTSASHWDITRIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHH HYGPDGFLNWDRLPVITTYRGHLFDQLGGTSNAGAVTHATGTRAHAKSFGLDPDGKEYSS HCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCC ANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAKAAKRSDYEEIALQVVESGVDII CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEE LGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHEE NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMC CCCHHHCCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH NNLNASGCLEAMKRADDAIGVILNFIEKNPKTFMITTSDSNAGGMQLVDIESAEEPLPPT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC DPKGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATGDDVGSGVIARAAGLNARELV CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHEE PVTGILNTDIYRILYFVLFGERIPSELKP EECCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLATRSYSLRAALAATVCVLSSSVFSSSLAQAAPQPTGNGAIFFHPDGTSASHWDITRIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHH HYGPDGFLNWDRLPVITTYRGHLFDQLGGTSNAGAVTHATGTRAHAKSFGLDPDGKEYSS HCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCC ANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAKAAKRSDYEEIALQVVESGVDII CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEE LGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHEE NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMC CCCHHHCCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH NNLNASGCLEAMKRADDAIGVILNFIEKNPKTFMITTSDSNAGGMQLVDIESAEEPLPPT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC DPKGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATGDDVGSGVIARAAGLNARELV CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHEE PVTGILNTDIYRILYFVLFGERIPSELKP EECCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]