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The map label for this gene is selD [H]

Identifier: 86608660

GI number: 86608660

Start: 1222137

End: 1223204

Strand: Direct

Name: selD [H]

Synonym: CYB_1184

Alternate gene names: 86608660

Gene position: 1222137-1223204 (Clockwise)

Preceding gene: 86608658

Following gene: 86608661

Centisome position: 40.11

GC content: 60.58

Gene sequence:

>1068_bases
ATGGATGCTCCCATTCGCCTCACCCAGTACTCCCACGGCGGTGGCTGCGGCTGTAAAATTGCCCCGGCCCTGCTGCAACA
AATTCTTAAGGATGTGCCCCTGCTATCCCCAAATCCGGCTTTGTTGGTGGGAGCTGAAACCAGCGATGATGCGGCTGTCT
ATCAACTAAACGACCACCAAGCCCTAATTTTGACCACCGACTTCTTCATGCCGATTGTGGATGAGCCGGTGGATTTTGGT
CGGATCGCGGCGACCAATGCCCTTTCCGATGTCTACGCGATGGGGGGCACTCCCATTCTGGCTTTGGCGGTTTTGGGCAT
GCCGGTCAATACCCTGCCGATGCAGGCCATCCAAGGGATCATGGCCGGAGGGATCCAGGTTTGCCAAGAAGCCGGGATCC
CTTTGGCAGGGGGGCACTCCATCGATTCGCCGGAGCCCATCTTCGGCTTGGTGGCAGCAGGTTTGGCCCATCCACACCAC
ATTCGCCGCAATGCCACGGCCCAAGCCGGGGACGATCTGATCCTGACCAAACCGCTGGGGATCGGGGTGATGACCACCGC
TCTGAAAAAGGGTCAGCTCAGTGCGGCAGGCTACGCGGAAGTTTTGCAGGTGATGACCCAGCTGAATCGCATCGGCTCGC
AACTGGCCCAGCGACCGCAAGTTCACGCCATGACGGATGTAACAGGGTTTGGCCTGGTGGGACACTTGCTGGAAGTCTGT
CGCGGCTCGGGGGTGGGGGCCAGTTTGGATCTGGCTTCCATTCCGTTTTTGGCAGAAGCGCTCTCGCTGGCAGAGGCGGG
GATCTTTCCAGGGGCGGCTCGTCGCAATTGGCAGGGCTATGAGGGGGTACAGGCAGAATCCCTGCCCGAGTGGCAGCAAC
TGCTGCTGGCAGATCCCCAAACCAGCGGGGGCTTGCTGGTGGCGGTGGATCCCGGCTACACCTCAGACCTCTTGCAAGAG
CTGCACAGTGCCGGCTACCCCTACGCCCGTCGCATCGGCCGATGCCAAGCTGGAGACACCAGAATCCATGTTACCGGCAA
GATCAGCCTCAGCCCAGCGGCAGCCTGA

Upstream 100 bases:

>100_bases
TGGGATCCCTTTAACCTTAACTCAGCGTGTCCATTTCTCGACTGCCTGCAGATGCCGCTACAGTAAAGTCAGCTGATGTT
TTTTCCCTTTTCTTGAATCT

Downstream 100 bases:

>100_bases
AGAAGACCCTCTGGCAATACTCACCATGCAAAGTCTCATGCAAAGTCTCGATAGAGGGCTCAGTATGAAGATTGCGTCAA
GCAGCTCTGAGAAAGTTAAA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDAPIRLTQYSHGGGCGCKIAPALLQQILKDVPLLSPNPALLVGAETSDDAAVYQLNDHQALILTTDFFMPIVDEPVDFG
RIAATNALSDVYAMGGTPILALAVLGMPVNTLPMQAIQGIMAGGIQVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPHH
IRRNATAQAGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGSQLAQRPQVHAMTDVTGFGLVGHLLEVC
RGSGVGASLDLASIPFLAEALSLAEAGIFPGAARRNWQGYEGVQAESLPEWQQLLLADPQTSGGLLVAVDPGYTSDLLQE
LHSAGYPYARRIGRCQAGDTRIHVTGKISLSPAAA

Sequences:

>Translated_355_residues
MDAPIRLTQYSHGGGCGCKIAPALLQQILKDVPLLSPNPALLVGAETSDDAAVYQLNDHQALILTTDFFMPIVDEPVDFG
RIAATNALSDVYAMGGTPILALAVLGMPVNTLPMQAIQGIMAGGIQVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPHH
IRRNATAQAGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGSQLAQRPQVHAMTDVTGFGLVGHLLEVC
RGSGVGASLDLASIPFLAEALSLAEAGIFPGAARRNWQGYEGVQAESLPEWQQLLLADPQTSGGLLVAVDPGYTSDLLQE
LHSAGYPYARRIGRCQAGDTRIHVTGKISLSPAAA
>Mature_355_residues
MDAPIRLTQYSHGGGCGCKIAPALLQQILKDVPLLSPNPALLVGAETSDDAAVYQLNDHQALILTTDFFMPIVDEPVDFG
RIAATNALSDVYAMGGTPILALAVLGMPVNTLPMQAIQGIMAGGIQVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPHH
IRRNATAQAGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGSQLAQRPQVHAMTDVTGFGLVGHLLEVC
RGSGVGASLDLASIPFLAEALSLAEAGIFPGAARRNWQGYEGVQAESLPEWQQLLLADPQTSGGLLVAVDPGYTSDLLQE
LHSAGYPYARRIGRCQAGDTRIHVTGKISLSPAAA

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=395, Percent_Identity=26.8354430379747, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI15011844, Length=368, Percent_Identity=26.9021739130435, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788062, Length=307, Percent_Identity=53.7459283387622, Blast_Score=320, Evalue=7e-89,
Organism=Caenorhabditis elegans, GI17543426, Length=362, Percent_Identity=29.8342541436464, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24653602, Length=295, Percent_Identity=31.864406779661, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24653604, Length=295, Percent_Identity=31.864406779661, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28574119, Length=291, Percent_Identity=29.553264604811, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28574118, Length=262, Percent_Identity=32.0610687022901, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36967; Mature: 36967

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPIRLTQYSHGGGCGCKIAPALLQQILKDVPLLSPNPALLVGAETSDDAAVYQLNDHQ
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCC
ALILTTDFFMPIVDEPVDFGRIAATNALSDVYAMGGTPILALAVLGMPVNTLPMQAIQGI
EEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH
MAGGIQVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPHHIRRNATAQAGDDLILTKPLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCC
IGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGSQLAQRPQVHAMTDVTGFGLVGHLLEVC
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
RGSGVGASLDLASIPFLAEALSLAEAGIFPGAARRNWQGYEGVQAESLPEWQQLLLADPQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TSGGLLVAVDPGYTSDLLQELHSAGYPYARRIGRCQAGDTRIHVTGKISLSPAAA
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCC
>Mature Secondary Structure
MDAPIRLTQYSHGGGCGCKIAPALLQQILKDVPLLSPNPALLVGAETSDDAAVYQLNDHQ
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCC
ALILTTDFFMPIVDEPVDFGRIAATNALSDVYAMGGTPILALAVLGMPVNTLPMQAIQGI
EEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH
MAGGIQVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPHHIRRNATAQAGDDLILTKPLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCC
IGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGSQLAQRPQVHAMTDVTGFGLVGHLLEVC
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
RGSGVGASLDLASIPFLAEALSLAEAGIFPGAARRNWQGYEGVQAESLPEWQQLLLADPQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TSGGLLVAVDPGYTSDLLQELHSAGYPYARRIGRCQAGDTRIHVTGKISLSPAAA
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA