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The map label for this gene is yafV [C]

Identifier: 86608657

GI number: 86608657

Start: 1217387

End: 1218214

Strand: Direct

Name: yafV [C]

Synonym: CYB_1181

Alternate gene names: 86608657

Gene position: 1217387-1218214 (Clockwise)

Preceding gene: 86608656

Following gene: 86608658

Centisome position: 39.96

GC content: 59.42

Gene sequence:

>828_bases
ATGCGCTCTTATCTGGCAGCCGCCATTCAAATGACCAGCATTCCCGATCTGGCCAGCAACTTGCAGCAGGCGGAAGAGTG
GATCGACTTTGCAGTGCGCCAGGGATGCGAGCTGGTGACGCTACCAGAAAACTTTGCCTTCATGGGGCCGGAAGCCGAGA
AAGCCCGCCTTGCTCCTGAGATTGCGGAGCGGGCGGAGGAGTTTTTGGCCAAGATGGCCCAGCGTTACCAAGTATTTATT
TTGGGAGGAGGGTATCCTGTGCCGGACGGGCAGGGCAAAGTTTACAATACCGCTGCCCTCTACAGCCCTGACGGCAAAGA
GCTGGCCCGCTATCGCAAAATCCACCTGTTCGATGTCAATCTGCCCGACGGCAATACCTACCGCGAGTCGAACACGGTGG
TCAGCGGAGATGAGGTGGTCACCTGCGAGCAAGAGCAACTGGGGAACCTCGGTTTGTCGGTCTGCTACGACGTACGCTTT
CCAGAGCTGTACCGATCCCTGGTGGATCGCGGAGCCCAGATTTTGCTCATCCCTGCCGCCTTCACGGCCTACACGGGTCG
GGATCACTGGCAGGTTTTGCTGCAATGCCGGGCCATTGAGAACACCTGTTACGTGATAGCCCCCGCCCAGGTGGGCACCC
ACTACGAGCGGCGACAGTGTCACGGCCATGCCATGATCGTGGACCCCTGGGGGACTATCTTGGCGGATGCGGGTGGCGAA
AAACCGGGGGTGGCCATTGCTGAAATTAACCCAGAGCGTTTCCAGTTGGTCAGGCGGCAGATGCCTTCCCTACAACACCG
TCGGCTGGCCTGCACCGTCACCCGCTAG

Upstream 100 bases:

>100_bases
GTTTGGGTTGTGATCCGATTTGTGGGGCCTGCCTTGGGCTGGTGGCATCTGGTCGGCTAGCCGGCCGGATCCCCTTTAGC
ATCCTTTGGAGTTTCCGTCT

Downstream 100 bases:

>100_bases
GGATCCGCTGTGCCTTGGCCCCCCCTGATTCTCTACAGCAAACCCGGCTGCCACCTCTGCGAGAGCTTGGTGGAGAAGTT
GCGGCAGATCCCCGAAATCC

Product: carbon-nitrogen family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRSYLAAAIQMTSIPDLASNLQQAEEWIDFAVRQGCELVTLPENFAFMGPEAEKARLAPEIAERAEEFLAKMAQRYQVFI
LGGGYPVPDGQGKVYNTAALYSPDGKELARYRKIHLFDVNLPDGNTYRESNTVVSGDEVVTCEQEQLGNLGLSVCYDVRF
PELYRSLVDRGAQILLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEINPERFQLVRRQMPSLQHRRLACTVTR

Sequences:

>Translated_275_residues
MRSYLAAAIQMTSIPDLASNLQQAEEWIDFAVRQGCELVTLPENFAFMGPEAEKARLAPEIAERAEEFLAKMAQRYQVFI
LGGGYPVPDGQGKVYNTAALYSPDGKELARYRKIHLFDVNLPDGNTYRESNTVVSGDEVVTCEQEQLGNLGLSVCYDVRF
PELYRSLVDRGAQILLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEINPERFQLVRRQMPSLQHRRLACTVTR
>Mature_275_residues
MRSYLAAAIQMTSIPDLASNLQQAEEWIDFAVRQGCELVTLPENFAFMGPEAEKARLAPEIAERAEEFLAKMAQRYQVFI
LGGGYPVPDGQGKVYNTAALYSPDGKELARYRKIHLFDVNLPDGNTYRESNTVVSGDEVVTCEQEQLGNLGLSVCYDVRF
PELYRSLVDRGAQILLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEINPERFQLVRRQMPSLQHRRLACTVTR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632350, Length=270, Percent_Identity=40, Blast_Score=194, Evalue=6e-50,
Organism=Homo sapiens, GI297632348, Length=270, Percent_Identity=40, Blast_Score=194, Evalue=6e-50,
Organism=Homo sapiens, GI5031947, Length=270, Percent_Identity=40, Blast_Score=194, Evalue=7e-50,
Organism=Homo sapiens, GI9910460, Length=272, Percent_Identity=35.6617647058824, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI297632346, Length=193, Percent_Identity=35.7512953367876, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17556280, Length=268, Percent_Identity=39.9253731343284, Blast_Score=193, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6323383, Length=273, Percent_Identity=34.0659340659341, Blast_Score=170, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6322335, Length=298, Percent_Identity=31.5436241610738, Blast_Score=166, Evalue=5e-42,
Organism=Drosophila melanogaster, GI17933642, Length=271, Percent_Identity=37.6383763837638, Blast_Score=171, Evalue=5e-43,
Organism=Drosophila melanogaster, GI21355835, Length=274, Percent_Identity=30.6569343065693, Blast_Score=147, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30762; Mature: 30762

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYLAAAIQMTSIPDLASNLQQAEEWIDFAVRQGCELVTLPENFAFMGPEAEKARLAPE
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHCCHH
IAERAEEFLAKMAQRYQVFILGGGYPVPDGQGKVYNTAALYSPDGKELARYRKIHLFDVN
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHEEEEEEEEE
LPDGNTYRESNTVVSGDEVVTCEQEQLGNLGLSVCYDVRFPELYRSLVDRGAQILLIPAA
CCCCCCCCCCCCEECCCCEEEECHHHHCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEH
FTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
HHCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHCCCEEEECCCHHHHCCCCCC
KPGVAIAEINPERFQLVRRQMPSLQHRRLACTVTR
CCCEEEEECCHHHHHHHHHHCCCHHHCEEEEEECC
>Mature Secondary Structure
MRSYLAAAIQMTSIPDLASNLQQAEEWIDFAVRQGCELVTLPENFAFMGPEAEKARLAPE
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHCCHH
IAERAEEFLAKMAQRYQVFILGGGYPVPDGQGKVYNTAALYSPDGKELARYRKIHLFDVN
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHEEEEEEEEE
LPDGNTYRESNTVVSGDEVVTCEQEQLGNLGLSVCYDVRFPELYRSLVDRGAQILLIPAA
CCCCCCCCCCCCEECCCCEEEECHHHHCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEH
FTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
HHCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHCCCEEEECCCHHHHCCCCCC
KPGVAIAEINPERFQLVRRQMPSLQHRRLACTVTR
CCCEEEEECCHHHHHHHHHHCCCHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]