| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608655
Identifier: 86608655
GI number: 86608655
Start: 1216236
End: 1216991
Strand: Direct
Name: 86608655
Synonym: CYB_1179
Alternate gene names: NA
Gene position: 1216236-1216991 (Clockwise)
Preceding gene: 86608654
Following gene: 86608656
Centisome position: 39.92
GC content: 63.23
Gene sequence:
>756_bases ATGAAAGCCGAATCTGTGTCTCCCGAAGAACTGCAACTGTGGCTGGCGGGCTACGTGCTGGGGGATCTCTCCCCGGAAGA GGCCGAGCGGCTGGAAGCCTTGCTCAAGCTGCGCCCGGAGCTGCACCGAGAACTGCAGGCTTTGCAACAGGCATTGGAGA CAGCCTACGGCGTGGAGGAAAAGCAACCTCCCCCCGCCCTGCGGGCTTCTCTGTTGCAGGCACATGCGGAGCAGGCAGCC CAACCGATGCGCACCCCCGCCTGGATTGCCAAGGGATCCCGTCTCTGGCAACGGGGCTTGGGGGCGGTGGCCGCAGGCTT GATCGTCGCTTTGGGGCTGGGGAACCTCTACCTGTGGCGCAGGCTGCAGCTAGCCCAGACGCAAGGGATCCCTGCCGAGG TGTTGACCTATGAATTGCAGCCGACTGCGGAGAACCTGGCCGGCTCGGTCAAGCTTGAGGTGGATCCCCAGCGCCTGCAA GGGCGATTGGTGGCCCAAGGGTTGCCGCCTTTGCCGGAAGGCCGGGTCTATGCCCTGTGGGTGGTGCTGGAACCGGAGGC GCCCTTTACCACCGATAGAGCGGGGGCCGTTCTCGTGGCAGCTTTTCCGGTGGATGAAACAGGAAATCGCCAACAGGAGC TGCGCCTACCGCCGGTGTTTGAATCTACAGAATGGGTGCGGGCTGTGGCCATTACCGAAGAGGATGGCAATCGTCCCCAA GAGCACCAGGGATCCCCTTTGTGGATTTCCGGCTAG
Upstream 100 bases:
>100_bases AAACGGAAATTGCCAAGCAACTGGATCTGCCTTTGGGAACGGTCAAAGCCAGAGCTCGGCGGGCTCTGCTGCGGCTGCGC GAGTTGTTGGGAGGCCCCTC
Downstream 100 bases:
>100_bases GGATGGATTGGCGTGGCCCGATGGCACAAGTAGGCGATTGTGATGCAGATGGATGTCAACCCAGTCTTGTGACCAAGGCA GAAGGCCTTAAGATAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKAESVSPEELQLWLAGYVLGDLSPEEAERLEALLKLRPELHRELQALQQALETAYGVEEKQPPPALRASLLQAHAEQAA QPMRTPAWIAKGSRLWQRGLGAVAAGLIVALGLGNLYLWRRLQLAQTQGIPAEVLTYELQPTAENLAGSVKLEVDPQRLQ GRLVAQGLPPLPEGRVYALWVVLEPEAPFTTDRAGAVLVAAFPVDETGNRQQELRLPPVFESTEWVRAVAITEEDGNRPQ EHQGSPLWISG
Sequences:
>Translated_251_residues MKAESVSPEELQLWLAGYVLGDLSPEEAERLEALLKLRPELHRELQALQQALETAYGVEEKQPPPALRASLLQAHAEQAA QPMRTPAWIAKGSRLWQRGLGAVAAGLIVALGLGNLYLWRRLQLAQTQGIPAEVLTYELQPTAENLAGSVKLEVDPQRLQ GRLVAQGLPPLPEGRVYALWVVLEPEAPFTTDRAGAVLVAAFPVDETGNRQQELRLPPVFESTEWVRAVAITEEDGNRPQ EHQGSPLWISG >Mature_251_residues MKAESVSPEELQLWLAGYVLGDLSPEEAERLEALLKLRPELHRELQALQQALETAYGVEEKQPPPALRASLLQAHAEQAA QPMRTPAWIAKGSRLWQRGLGAVAAGLIVALGLGNLYLWRRLQLAQTQGIPAEVLTYELQPTAENLAGSVKLEVDPQRLQ GRLVAQGLPPLPEGRVYALWVVLEPEAPFTTDRAGAVLVAAFPVDETGNRQQELRLPPVFESTEWVRAVAITEEDGNRPQ EHQGSPLWISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27586; Mature: 27586
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAESVSPEELQLWLAGYVLGDLSPEEAERLEALLKLRPELHRELQALQQALETAYGVEE CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC KQPPPALRASLLQAHAEQAAQPMRTPAWIAKGSRLWQRGLGAVAAGLIVALGLGNLYLWR CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLQLAQTQGIPAEVLTYELQPTAENLAGSVKLEVDPQRLQGRLVAQGLPPLPEGRVYALW HHHHHHHCCCCHHHEEEECCCCHHHCCCEEEEEECHHHHCCCHHCCCCCCCCCCCEEEEE VVLEPEAPFTTDRAGAVLVAAFPVDETGNRQQELRLPPVFESTEWVRAVAITEEDGNRPQ EEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCH EHQGSPLWISG HHCCCCEEECC >Mature Secondary Structure MKAESVSPEELQLWLAGYVLGDLSPEEAERLEALLKLRPELHRELQALQQALETAYGVEE CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC KQPPPALRASLLQAHAEQAAQPMRTPAWIAKGSRLWQRGLGAVAAGLIVALGLGNLYLWR CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLQLAQTQGIPAEVLTYELQPTAENLAGSVKLEVDPQRLQGRLVAQGLPPLPEGRVYALW HHHHHHHCCCCHHHEEEECCCCHHHCCCEEEEEECHHHHCCCHHCCCCCCCCCCCEEEEE VVLEPEAPFTTDRAGAVLVAAFPVDETGNRQQELRLPPVFESTEWVRAVAITEEDGNRPQ EEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCH EHQGSPLWISG HHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA