| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608649
Identifier: 86608649
GI number: 86608649
Start: 1211146
End: 1211790
Strand: Reverse
Name: 86608649
Synonym: CYB_1173
Alternate gene names: NA
Gene position: 1211790-1211146 (Counterclockwise)
Preceding gene: 86608659
Following gene: 86608648
Centisome position: 39.77
GC content: 59.38
Gene sequence:
>645_bases GTGACGGTGGAACACAAGCACATTCAGTTAGACAGTCGGCCCGTTGGCCTGAACACAGCCACCGGTACCATCAAAGCCCA GTTGGACTTGCTACTGCTGGGGTTGGAGTCCCTGAGCGGAGAAAGTTCCGAAGCGGTTCTGGCCGCAGCCAAAGCCCTCA ACTTGGAAGAGCAGATTGGCGATCGGGTGACTCTCTGGCGACTGCGCAATGCTAACCCCTTGCGCCGCAGCAGCGGTGGG CGCAAAAAGGTCGATATCGAAGAGGCCCGCGCCCTGGTGATGGTGATTGCCTATCTGGCTGCTCAGCAACAAGCCCGTAT CCGCAGCACCTTGGAGCAACTGGAAGCCGCTGTCGATCAAGAGCTCAGCCCCTTCCGTCAGCCGCTGGTGGGAGATTACT TGGATGAATTCCTCTCTCACTACCGCAGCCGCATGGTGGATGGGGACGTGCGCGATGAGAATAGCCTCACCGAGCTGGCC CTGCGCATCTTGATTGAGCTGATGTTCTACAGTAGCCCGAAAGGCGCTCAGCGCCTGTGGAAAGCCTTGCTCAGCCGTCC TGAGATGGATTTGCCTGCCGGCAGCGATCTGGAAGAAGAGGGGGTAGCCCACAGCTCCGGCCCCGATGCCTCACCCTCTT CTTGA
Upstream 100 bases:
>100_bases CCAAAGTCTTTTAGACTAGAGCGCAGGGAGGTAGGTTGCAGGTTTGGCTTGGACAGGAGATCATAGAGTTTCGTCGAAAC CCAAAGCTCCCATTGACAGC
Downstream 100 bases:
>100_bases GGCAGGTTCGTCAATTATCACCTCTGTTATCGCCTTTGTAGCCCTCTACCCGTGTTGTTTGCCCGCAGTTGCCATGCCCA ACCTTACCCTGGTTAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTVEHKHIQLDSRPVGLNTATGTIKAQLDLLLLGLESLSGESSEAVLAAAKALNLEEQIGDRVTLWRLRNANPLRRSSGG RKKVDIEEARALVMVIAYLAAQQQARIRSTLEQLEAAVDQELSPFRQPLVGDYLDEFLSHYRSRMVDGDVRDENSLTELA LRILIELMFYSSPKGAQRLWKALLSRPEMDLPAGSDLEEEGVAHSSGPDASPSS
Sequences:
>Translated_214_residues MTVEHKHIQLDSRPVGLNTATGTIKAQLDLLLLGLESLSGESSEAVLAAAKALNLEEQIGDRVTLWRLRNANPLRRSSGG RKKVDIEEARALVMVIAYLAAQQQARIRSTLEQLEAAVDQELSPFRQPLVGDYLDEFLSHYRSRMVDGDVRDENSLTELA LRILIELMFYSSPKGAQRLWKALLSRPEMDLPAGSDLEEEGVAHSSGPDASPSS >Mature_213_residues TVEHKHIQLDSRPVGLNTATGTIKAQLDLLLLGLESLSGESSEAVLAAAKALNLEEQIGDRVTLWRLRNANPLRRSSGGR KKVDIEEARALVMVIAYLAAQQQARIRSTLEQLEAAVDQELSPFRQPLVGDYLDEFLSHYRSRMVDGDVRDENSLTELAL RILIELMFYSSPKGAQRLWKALLSRPEMDLPAGSDLEEEGVAHSSGPDASPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23588; Mature: 23457
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEHKHIQLDSRPVGLNTATGTIKAQLDLLLLGLESLSGESSEAVLAAAKALNLEEQIG CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHC DRVTLWRLRNANPLRRSSGGRKKVDIEEARALVMVIAYLAAQQQARIRSTLEQLEAAVDQ CCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSPFRQPLVGDYLDEFLSHYRSRMVDGDVRDENSLTELALRILIELMFYSSPKGAQRLW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH KALLSRPEMDLPAGSDLEEEGVAHSSGPDASPSS HHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure TVEHKHIQLDSRPVGLNTATGTIKAQLDLLLLGLESLSGESSEAVLAAAKALNLEEQIG CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHC DRVTLWRLRNANPLRRSSGGRKKVDIEEARALVMVIAYLAAQQQARIRSTLEQLEAAVDQ CCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSPFRQPLVGDYLDEFLSHYRSRMVDGDVRDENSLTELALRILIELMFYSSPKGAQRLW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH KALLSRPEMDLPAGSDLEEEGVAHSSGPDASPSS HHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA