| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608629
Identifier: 86608629
GI number: 86608629
Start: 1192105
End: 1193532
Strand: Direct
Name: 86608629
Synonym: CYB_1152
Alternate gene names: NA
Gene position: 1192105-1193532 (Clockwise)
Preceding gene: 86608628
Following gene: 86608630
Centisome position: 39.13
GC content: 60.85
Gene sequence:
>1428_bases ATGATTCATCCTCTGCTGCAACGGCTGCACCAATCCACCCTGACCCCGCTGCGGGATATCCACTGGACGCCGGAATTGTT CGGAATCCTCTTGGTGTACTTTGTGCAGGGGGCGGTGGGGCTGGCACGGCTGGCCACCAGCTTTTACCTGAAGGATAGCT TGGGCCTCAGCCCGTCTCAGGTGGCGGCGTTGATGGGCGTTGCCATGAGCCCCTGGATCCTCAAGCCCCTCTACGGCCTG CTGTCGGATACCGTACCGGTGGCGGGCTATCGGCGTCGTCCCTACCTCTTGTTGTCAGGGCTTCTGGGGTGTGGGGCTTG GCTGGGGATGGCCCTGTGGGCACCGACGGCTGGTCTGGCCACCCTGTGGATGGTTTTGGGATCCCTGGCGGTGGCGGTAG GGGATGTAATCGTAGATTCGCTGGTGGTGGAGCGGGTACACGGCAGTGACTGGGCGGGGACGGGCACGCTGCAATCTTTA ACTTGGGGAGCAACGGCCTTGGGATCCCTGCTCACCGCCTATTTGGGAGGAGCGCTCTTAGCCCATTATCCGCCGCAGGT GGTGTTTGGCCTGACAGCCTTGTTGCCGTTGTTCATCGCTTTGGCAGCTTGGGTTATTGCCGATCAACCGGTGGCGTTGT CCCAGGGCTGGGATCCCTTGCAACAACAGGTGGGGCAGGTGTGGCGGGCGCTGCGGCAACCCAGCATTTTGCTGCCGGTG CTGTTTGTGTTCGTTTGGCAGGCCACTCCCAGCGCCGATGCGGCTCTTTTTTACTTTGTCACCAACGATCTCGGCTTTGG GCCGGAATTTTTGGGTCAGGTGCGCTTGGTTACCAGCATCGCCAGTTTGCTGGGGGTAGGGATCTTCCAAGTGTACCTGC GGCGGATCCCACTGCGGCCCCTGTTCGGCTGGATGACCGTGATCTCGGCAGGGTTGGGCCTGACCAGCCTTATCTTGGTC TATCACCTCAACCGGGATTGGGGCATCGACGATCATTGGTTTAGCTTGGGGGACAGCCTGGTGCTGACGGTGGCAGGACA AATTGCCTTTATGCCAGTGCTGGTCTTGGCCGCCCGCCTCTGCCCCCCTGGGATCGAGGCCACCCTCTTTGCTCTGCTGA TGTCGGCCTTTAATTTGGCGGGGTTTCTCTCCCAAGAGCTGGGATCCCTGCTGATGCATGGGCTGGGGGTAACGGAGACC GATTTCAGCCGGCTGGGGCTGCTGCTGATCCTGACCAACCTTTCCACCCTCTTGCCCCTGCCGTTTTTGGGCTGGCTGCC GGAAGAGAGCATAACCCTTGGCGGAGCAGAACTGGAGGCGGAAGCCCATGCCTCTCTGGAATCCTTTCTGCGGGATGTGC AGGCAGAAGAAGCGGAGACAGCCTTGGCGATGGAAGGGGTCTCTCTGGCCGAAACCGACCCAACCTAA
Upstream 100 bases:
>100_bases TTGGACAGGTTAAGGTGAAGAGACTGTTAAGATTCTTATGGTTTTGCTGTTGCCAAGGCAACACCGCACCAACTAACATC TCGCTACACTGCGACCGCTC
Downstream 100 bases:
>100_bases AGAGACTCTGTCTGGCCTCGGGAAAGGCATACAGCCTCGGTGTCCAGCCGCTAAGATGGAGGGATGAGCTGGGTAGCCCC CACAACTCACTCGGATCTTT
Product: folate-biopterin transporter (FBT) family protein
Products: NA
Alternate protein names: Folate-Biopterin Transporter Family Protein; Folate/Biopterin Transporter Subfamily; Integral Membrane Protein; Biopterin Transport-Related; Biopterin Transport-Related -Like Protein
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MIHPLLQRLHQSTLTPLRDIHWTPELFGILLVYFVQGAVGLARLATSFYLKDSLGLSPSQVAALMGVAMSPWILKPLYGL LSDTVPVAGYRRRPYLLLSGLLGCGAWLGMALWAPTAGLATLWMVLGSLAVAVGDVIVDSLVVERVHGSDWAGTGTLQSL TWGATALGSLLTAYLGGALLAHYPPQVVFGLTALLPLFIALAAWVIADQPVALSQGWDPLQQQVGQVWRALRQPSILLPV LFVFVWQATPSADAALFYFVTNDLGFGPEFLGQVRLVTSIASLLGVGIFQVYLRRIPLRPLFGWMTVISAGLGLTSLILV YHLNRDWGIDDHWFSLGDSLVLTVAGQIAFMPVLVLAARLCPPGIEATLFALLMSAFNLAGFLSQELGSLLMHGLGVTET DFSRLGLLLILTNLSTLLPLPFLGWLPEESITLGGAELEAEAHASLESFLRDVQAEEAETALAMEGVSLAETDPT
Sequences:
>Translated_475_residues MIHPLLQRLHQSTLTPLRDIHWTPELFGILLVYFVQGAVGLARLATSFYLKDSLGLSPSQVAALMGVAMSPWILKPLYGL LSDTVPVAGYRRRPYLLLSGLLGCGAWLGMALWAPTAGLATLWMVLGSLAVAVGDVIVDSLVVERVHGSDWAGTGTLQSL TWGATALGSLLTAYLGGALLAHYPPQVVFGLTALLPLFIALAAWVIADQPVALSQGWDPLQQQVGQVWRALRQPSILLPV LFVFVWQATPSADAALFYFVTNDLGFGPEFLGQVRLVTSIASLLGVGIFQVYLRRIPLRPLFGWMTVISAGLGLTSLILV YHLNRDWGIDDHWFSLGDSLVLTVAGQIAFMPVLVLAARLCPPGIEATLFALLMSAFNLAGFLSQELGSLLMHGLGVTET DFSRLGLLLILTNLSTLLPLPFLGWLPEESITLGGAELEAEAHASLESFLRDVQAEEAETALAMEGVSLAETDPT >Mature_475_residues MIHPLLQRLHQSTLTPLRDIHWTPELFGILLVYFVQGAVGLARLATSFYLKDSLGLSPSQVAALMGVAMSPWILKPLYGL LSDTVPVAGYRRRPYLLLSGLLGCGAWLGMALWAPTAGLATLWMVLGSLAVAVGDVIVDSLVVERVHGSDWAGTGTLQSL TWGATALGSLLTAYLGGALLAHYPPQVVFGLTALLPLFIALAAWVIADQPVALSQGWDPLQQQVGQVWRALRQPSILLPV LFVFVWQATPSADAALFYFVTNDLGFGPEFLGQVRLVTSIASLLGVGIFQVYLRRIPLRPLFGWMTVISAGLGLTSLILV YHLNRDWGIDDHWFSLGDSLVLTVAGQIAFMPVLVLAARLCPPGIEATLFALLMSAFNLAGFLSQELGSLLMHGLGVTET DFSRLGLLLILTNLSTLLPLPFLGWLPEESITLGGAELEAEAHASLESFLRDVQAEEAETALAMEGVSLAETDPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51069; Mature: 51069
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPLLQRLHQSTLTPLRDIHWTPELFGILLVYFVQGAVGLARLATSFYLKDSLGLSPSQ CCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VAALMGVAMSPWILKPLYGLLSDTVPVAGYRRRPYLLLSGLLGCGAWLGMALWAPTAGLA HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH TLWMVLGSLAVAVGDVIVDSLVVERVHGSDWAGTGTLQSLTWGATALGSLLTAYLGGALL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AHYPPQVVFGLTALLPLFIALAAWVIADQPVALSQGWDPLQQQVGQVWRALRQPSILLPV HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHH LFVFVWQATPSADAALFYFVTNDLGFGPEFLGQVRLVTSIASLLGVGIFQVYLRRIPLRP HHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LFGWMTVISAGLGLTSLILVYHLNRDWGIDDHWFSLGDSLVLTVAGQIAFMPVLVLAARL HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CPPGIEATLFALLMSAFNLAGFLSQELGSLLMHGLGVTETDFSRLGLLLILTNLSTLLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC PFLGWLPEESITLGGAELEAEAHASLESFLRDVQAEEAETALAMEGVSLAETDPT HHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIHPLLQRLHQSTLTPLRDIHWTPELFGILLVYFVQGAVGLARLATSFYLKDSLGLSPSQ CCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VAALMGVAMSPWILKPLYGLLSDTVPVAGYRRRPYLLLSGLLGCGAWLGMALWAPTAGLA HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH TLWMVLGSLAVAVGDVIVDSLVVERVHGSDWAGTGTLQSLTWGATALGSLLTAYLGGALL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AHYPPQVVFGLTALLPLFIALAAWVIADQPVALSQGWDPLQQQVGQVWRALRQPSILLPV HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHH LFVFVWQATPSADAALFYFVTNDLGFGPEFLGQVRLVTSIASLLGVGIFQVYLRRIPLRP HHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LFGWMTVISAGLGLTSLILVYHLNRDWGIDDHWFSLGDSLVLTVAGQIAFMPVLVLAARL HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CPPGIEATLFALLMSAFNLAGFLSQELGSLLMHGLGVTETDFSRLGLLLILTNLSTLLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC PFLGWLPEESITLGGAELEAEAHASLESFLRDVQAEEAETALAMEGVSLAETDPT HHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA