Click here to switch to the map view.

The map label for this gene is 86608625

Identifier: 86608625

GI number: 86608625

Start: 1186153

End: 1188744

Strand: Direct

Name: 86608625

Synonym: CYB_1147

Alternate gene names: NA

Gene position: 1186153-1188744 (Clockwise)

Preceding gene: 86608624

Following gene: 86608626

Centisome position: 38.93

GC content: 59.53

Gene sequence:

>2592_bases
ATGATGCCGAGTGGCTCCAAAAATTCCGATAGGCCAGCGGCACAGTCAGGGCACAGCGATTTGGTCTCCGACCCGCCGAT
GCAAGCGGCTCCTTCTCCGGCAGGTGCTGCTGAGCTTTCCTCTGCGCGGCCGTACGTGGTGTTGCACGGCCATTTCTATC
AGCCGCCCCGAGAGGATCCCTGCCTCAACCGCATTCAGCGACAGCCGAGCGCCAGCCCCTTTCACGACTGGAACGAACGC
ATTTGGGCGGAATGTTACCGCCCCAACGCCTTTGCCCGCGTTCTGGACGACCAAGGACGGGTGGTGCGCATTGTCAACAA
CTATGAATTCTTGAGCTTTAACTTCGGCCCTACTCTCCTCTCTTGGCTAGAGGAGCATGACATTGAAGTTTACCAACGCA
TTTTGGCCGGCGACCGTCTCAGCGCTGAGCGGCTGGAGGGTCATGGCAATGCCATCGCCCAAGTCTACAACCACGTCATC
CTGCCCCTGGCCAACGAGCGAGACAAGTACACCCAGATCCGCTGGGGAATTGCCGATTTTCAACACCGCTTTGGGCGCCA
TCCCCAGGGCATGTGGCTGGCCGAAACCGCCATTGATGCAGCAACGGTCACGGCCTTGGTCGAATGTGGGATCCGCTTCG
TCATTTTGGCCCCCAGCCAAGCGCAGCGCATTCGCCCCTTGGGACAAACGGAGTGGATCGAAGTTAGCCAAGGCCAGATC
GATCCCCGTCGGCCCTACCGCTGCTTTACCCCCGATCGGGAGGGGTACTTGGATATTTTCTTTTTCGATGGCCCCATTTC
CCGTGACTTGGGCTTTGGGGATATCGTTTACAGTACTTATTCGCTGGCGGAGCGGATCCGTTCCGCTCTGCGCTCGGACA
AAGAGGGGGAAGCCTATCTGATCAACTGTGCCACCGATGGAGAGACTTTTGGCCACCACAAGCGGGGTGTAGAACGCACG
CTGGCCTATGCCTTTTGCGAGGAATTTCCCCGCCGGGGCTGGCAGGTGGGCAACTACAGCCATTTTCTCAGCCAACATCC
CCCCACTTGGGAGGTGCAACTGAAACCGGTCACCGCCTGGAGCTGCGCCCACGGGGTAGGACGGTGGTCGCGAGACTGTG
GCTGCGGAGCGGTGGGAGGGTGGCACCAACGCTGGCGGCAACCGCTGCGGGAGGCCCTCAACTGGCTGCGGGATCAGCTG
GCCGAGATCTACGAGACAGAAGCCAGAGCCTACCTGCGGGATCCCTGGCTGGCGCGGGATCGTTACATCGAGGTGATTTT
GGATCGGGAGCGCTGTGATGCCTTTTTGCAGGAGCACCAAAGCCACCGCCTCACCGCCGAAGATCGGGTGCAAGTGCTGC
GCCTGTTGGAGATGCAGCGCTACAGCCAGTTGATGTTCACCAGTTGTGGCTGGTTTTTCGAGGAGCTATCCCGTCCTGAA
GGGGTGCAGATCCTGCGTTACGCGGCACGGGCTATCCAGTTGGCAGCAGCAGTGGCGGATGTCAACCTAGAAGAGGAGTT
TTTGCAGCGCCTGAGCAAGGCCCCCAGCAACCTCGACCTCTACAGAGACGGCAAGGGGGTCTATTGCGCCTTGGTGCGCC
CCAGCTTGATCAGCCCGCAACGGCTGGTGGCTCAGCACGCCATGTTTTCCCTGTTTAACGGGATCCCCCGTTCCCAAGGA
TATGTGCTGGATCAGGTGGATCAAGAGCGCCTGAGGATAGGGGGATCGACGCTGGCCATCGGGCGGGTGAAACTCACCTT
TCCCACCACCCGCGAAGAGCACGACCTGATCTACGCCATGCTCCATCTCGGCGGTTGGGACTTTCAATGTGGGGTCAAGC
CATTTGCCGGGCGGCGCCTCTATGAGCAGATAAAAGTGCGCCTACTGGCCGGATCCCACAGCCGGGTACAGATGATCCTG
ACTCTGCAAGAGCTGTTTGGGCCAGAGACCTTCGACCTCAACACCCTGAACGACGAAGATCGGCAGCAGATGATGCGCTG
GCTCACCCAAGATACCCTAGACCGCCTAGGCCAGCTCTACCGCCAAACCTACCTGGACAATTACGGAGTCTTGATGGCCT
TCCGAGCGGATGGCCTGCCGATCCCGGAAGAGTTGTTGGCTGCTGCCCAGATTACCCTCAACCAACGCCTGTTGAGCAGT
TTGCGGGCAATGGAAATGGAAGAGGGCAAGCGGGATCATCTGCTGGAATTGCGGGCAATTGTGCGTGAGGCCGAGCAGTT
GGGGTGCCAGTTGCGGCGGGAAGAAGCAGCCCGCGTTTTGGATCGGCTCCTACAGCGGGGGATGTGGCACCTTGCCCACG
CTTTTGAGCCGGAGACCTTCGGCGAACAGCTCTACAACCTGGAAGAATGGCTGCAATTGGCTGCAGACCTGCGCCTGCCC
ATCAACTTGGATCGCCTGCAAGAGCTCTATCTGACAGCGCTGGAGCGTCAAATTGGCCCGCGTTGCCCAGCTTGGCCCCA
AGAAGACTGCCGAGACATTTCTGCCGAAAACCTGCACCGCCTCTTACAGGTTGGGCAGCGAATTCGGGTCAACGTCAATG
CCTGGCTGCGTCACCTACACCCCCAAAATTAA

Upstream 100 bases:

>100_bases
GTTGCAGATCGGGGATCGCTGTAACGTATGGATATGAACTTAAGTTAACATTGCCTTCCCCTGTAACCCAGTTGGAGGCC
TCTAAAAGGAGTGTAATCTC

Downstream 100 bases:

>100_bases
ACCCCCAAGATTAAGTTGAGAGCTCAGTGAACTTTAAAGCCATCGGGATGACAGGATTCGAACCTGCGACCCCTTCGTCC
CGAACGAAGTGCGCTACCAA

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MMPSGSKNSDRPAAQSGHSDLVSDPPMQAAPSPAGAAELSSARPYVVLHGHFYQPPREDPCLNRIQRQPSASPFHDWNER
IWAECYRPNAFARVLDDQGRVVRIVNNYEFLSFNFGPTLLSWLEEHDIEVYQRILAGDRLSAERLEGHGNAIAQVYNHVI
LPLANERDKYTQIRWGIADFQHRFGRHPQGMWLAETAIDAATVTALVECGIRFVILAPSQAQRIRPLGQTEWIEVSQGQI
DPRRPYRCFTPDREGYLDIFFFDGPISRDLGFGDIVYSTYSLAERIRSALRSDKEGEAYLINCATDGETFGHHKRGVERT
LAYAFCEEFPRRGWQVGNYSHFLSQHPPTWEVQLKPVTAWSCAHGVGRWSRDCGCGAVGGWHQRWRQPLREALNWLRDQL
AEIYETEARAYLRDPWLARDRYIEVILDRERCDAFLQEHQSHRLTAEDRVQVLRLLEMQRYSQLMFTSCGWFFEELSRPE
GVQILRYAARAIQLAAAVADVNLEEEFLQRLSKAPSNLDLYRDGKGVYCALVRPSLISPQRLVAQHAMFSLFNGIPRSQG
YVLDQVDQERLRIGGSTLAIGRVKLTFPTTREEHDLIYAMLHLGGWDFQCGVKPFAGRRLYEQIKVRLLAGSHSRVQMIL
TLQELFGPETFDLNTLNDEDRQQMMRWLTQDTLDRLGQLYRQTYLDNYGVLMAFRADGLPIPEELLAAAQITLNQRLLSS
LRAMEMEEGKRDHLLELRAIVREAEQLGCQLRREEAARVLDRLLQRGMWHLAHAFEPETFGEQLYNLEEWLQLAADLRLP
INLDRLQELYLTALERQIGPRCPAWPQEDCRDISAENLHRLLQVGQRIRVNVNAWLRHLHPQN

Sequences:

>Translated_863_residues
MMPSGSKNSDRPAAQSGHSDLVSDPPMQAAPSPAGAAELSSARPYVVLHGHFYQPPREDPCLNRIQRQPSASPFHDWNER
IWAECYRPNAFARVLDDQGRVVRIVNNYEFLSFNFGPTLLSWLEEHDIEVYQRILAGDRLSAERLEGHGNAIAQVYNHVI
LPLANERDKYTQIRWGIADFQHRFGRHPQGMWLAETAIDAATVTALVECGIRFVILAPSQAQRIRPLGQTEWIEVSQGQI
DPRRPYRCFTPDREGYLDIFFFDGPISRDLGFGDIVYSTYSLAERIRSALRSDKEGEAYLINCATDGETFGHHKRGVERT
LAYAFCEEFPRRGWQVGNYSHFLSQHPPTWEVQLKPVTAWSCAHGVGRWSRDCGCGAVGGWHQRWRQPLREALNWLRDQL
AEIYETEARAYLRDPWLARDRYIEVILDRERCDAFLQEHQSHRLTAEDRVQVLRLLEMQRYSQLMFTSCGWFFEELSRPE
GVQILRYAARAIQLAAAVADVNLEEEFLQRLSKAPSNLDLYRDGKGVYCALVRPSLISPQRLVAQHAMFSLFNGIPRSQG
YVLDQVDQERLRIGGSTLAIGRVKLTFPTTREEHDLIYAMLHLGGWDFQCGVKPFAGRRLYEQIKVRLLAGSHSRVQMIL
TLQELFGPETFDLNTLNDEDRQQMMRWLTQDTLDRLGQLYRQTYLDNYGVLMAFRADGLPIPEELLAAAQITLNQRLLSS
LRAMEMEEGKRDHLLELRAIVREAEQLGCQLRREEAARVLDRLLQRGMWHLAHAFEPETFGEQLYNLEEWLQLAADLRLP
INLDRLQELYLTALERQIGPRCPAWPQEDCRDISAENLHRLLQVGQRIRVNVNAWLRHLHPQN
>Mature_863_residues
MMPSGSKNSDRPAAQSGHSDLVSDPPMQAAPSPAGAAELSSARPYVVLHGHFYQPPREDPCLNRIQRQPSASPFHDWNER
IWAECYRPNAFARVLDDQGRVVRIVNNYEFLSFNFGPTLLSWLEEHDIEVYQRILAGDRLSAERLEGHGNAIAQVYNHVI
LPLANERDKYTQIRWGIADFQHRFGRHPQGMWLAETAIDAATVTALVECGIRFVILAPSQAQRIRPLGQTEWIEVSQGQI
DPRRPYRCFTPDREGYLDIFFFDGPISRDLGFGDIVYSTYSLAERIRSALRSDKEGEAYLINCATDGETFGHHKRGVERT
LAYAFCEEFPRRGWQVGNYSHFLSQHPPTWEVQLKPVTAWSCAHGVGRWSRDCGCGAVGGWHQRWRQPLREALNWLRDQL
AEIYETEARAYLRDPWLARDRYIEVILDRERCDAFLQEHQSHRLTAEDRVQVLRLLEMQRYSQLMFTSCGWFFEELSRPE
GVQILRYAARAIQLAAAVADVNLEEEFLQRLSKAPSNLDLYRDGKGVYCALVRPSLISPQRLVAQHAMFSLFNGIPRSQG
YVLDQVDQERLRIGGSTLAIGRVKLTFPTTREEHDLIYAMLHLGGWDFQCGVKPFAGRRLYEQIKVRLLAGSHSRVQMIL
TLQELFGPETFDLNTLNDEDRQQMMRWLTQDTLDRLGQLYRQTYLDNYGVLMAFRADGLPIPEELLAAAQITLNQRLLSS
LRAMEMEEGKRDHLLELRAIVREAEQLGCQLRREEAARVLDRLLQRGMWHLAHAFEPETFGEQLYNLEEWLQLAADLRLP
INLDRLQELYLTALERQIGPRCPAWPQEDCRDISAENLHRLLQVGQRIRVNVNAWLRHLHPQN

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99584; Mature: 99584

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPSGSKNSDRPAAQSGHSDLVSDPPMQAAPSPAGAAELSSARPYVVLHGHFYQPPREDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCH
CLNRIQRQPSASPFHDWNERIWAECYRPNAFARVLDDQGRVVRIVNNYEFLSFNFGPTLL
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCEEEEECCCHHHH
SWLEEHDIEVYQRILAGDRLSAERLEGHGNAIAQVYNHVILPLANERDKYTQIRWGIADF
HHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
QHRFGRHPQGMWLAETAIDAATVTALVECGIRFVILAPSQAQRIRPLGQTEWIEVSQGQI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEEEECCCCC
DPRRPYRCFTPDREGYLDIFFFDGPISRDLGFGDIVYSTYSLAERIRSALRSDKEGEAYL
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
INCATDGETFGHHKRGVERTLAYAFCEEFPRRGWQVGNYSHFLSQHPPTWEVQLKPVTAW
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEHH
SCAHGVGRWSRDCGCGAVGGWHQRWRQPLREALNWLRDQLAEIYETEARAYLRDPWLARD
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RYIEVILDRERCDAFLQEHQSHRLTAEDRVQVLRLLEMQRYSQLMFTSCGWFFEELSRPE
HHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVQILRYAARAIQLAAAVADVNLEEEFLQRLSKAPSNLDLYRDGKGVYCALVRPSLISPQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCHH
RLVAQHAMFSLFNGIPRSQGYVLDQVDQERLRIGGSTLAIGRVKLTFPTTREEHDLIYAM
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHH
LHLGGWDFQCGVKPFAGRRLYEQIKVRLLAGSHSRVQMILTLQELFGPETFDLNTLNDED
HHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHEEHHHHHCCCCEECCCCCHHH
RQQMMRWLTQDTLDRLGQLYRQTYLDNYGVLMAFRADGLPIPEELLAAAQITLNQRLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LRAMEMEEGKRDHLLELRAIVREAEQLGCQLRREEAARVLDRLLQRGMWHLAHAFEPETF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
GEQLYNLEEWLQLAADLRLPINLDRLQELYLTALERQIGPRCPAWPQEDCRDISAENLHR
HHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHH
LLQVGQRIRVNVNAWLRHLHPQN
HHHCCHHEEEEHHHHHHHCCCCC
>Mature Secondary Structure
MMPSGSKNSDRPAAQSGHSDLVSDPPMQAAPSPAGAAELSSARPYVVLHGHFYQPPREDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCH
CLNRIQRQPSASPFHDWNERIWAECYRPNAFARVLDDQGRVVRIVNNYEFLSFNFGPTLL
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCEEEEECCCHHHH
SWLEEHDIEVYQRILAGDRLSAERLEGHGNAIAQVYNHVILPLANERDKYTQIRWGIADF
HHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
QHRFGRHPQGMWLAETAIDAATVTALVECGIRFVILAPSQAQRIRPLGQTEWIEVSQGQI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEEEECCCCC
DPRRPYRCFTPDREGYLDIFFFDGPISRDLGFGDIVYSTYSLAERIRSALRSDKEGEAYL
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
INCATDGETFGHHKRGVERTLAYAFCEEFPRRGWQVGNYSHFLSQHPPTWEVQLKPVTAW
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEHH
SCAHGVGRWSRDCGCGAVGGWHQRWRQPLREALNWLRDQLAEIYETEARAYLRDPWLARD
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RYIEVILDRERCDAFLQEHQSHRLTAEDRVQVLRLLEMQRYSQLMFTSCGWFFEELSRPE
HHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVQILRYAARAIQLAAAVADVNLEEEFLQRLSKAPSNLDLYRDGKGVYCALVRPSLISPQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCHH
RLVAQHAMFSLFNGIPRSQGYVLDQVDQERLRIGGSTLAIGRVKLTFPTTREEHDLIYAM
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHH
LHLGGWDFQCGVKPFAGRRLYEQIKVRLLAGSHSRVQMILTLQELFGPETFDLNTLNDED
HHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHEEHHHHHCCCCEECCCCCHHH
RQQMMRWLTQDTLDRLGQLYRQTYLDNYGVLMAFRADGLPIPEELLAAAQITLNQRLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LRAMEMEEGKRDHLLELRAIVREAEQLGCQLRREEAARVLDRLLQRGMWHLAHAFEPETF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
GEQLYNLEEWLQLAADLRLPINLDRLQELYLTALERQIGPRCPAWPQEDCRDISAENLHR
HHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHH
LLQVGQRIRVNVNAWLRHLHPQN
HHHCCHHEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA