| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608206
Identifier: 86608206
GI number: 86608206
Start: 740889
End: 741632
Strand: Reverse
Name: 86608206
Synonym: CYB_0721
Alternate gene names: NA
Gene position: 741632-740889 (Counterclockwise)
Preceding gene: 86608207
Following gene: 86608205
Centisome position: 24.34
GC content: 61.02
Gene sequence:
>744_bases ATGCGCAGCCATTGGCAGGAACCTTTCCTCTGGATCCATGCCGCCGGCATCCTCCTCTTCCCCTTGTGGGTGGGGCTGAC CCTGATCGGGCTGGCCACAGGGGATCCCCTCCTGCCGGTGGGGGCGGAGCAGGCTTGGGTGGCCGTGGTGGGCATTGGGC CGGTCTTTGCTATGCAGTGGCGCAAACCGTTTGACATCTTTAGCGTGTGGGTGGCTTCTGTCCCCCCAGAAGAACTCACC CTCGAGCAGCGCCGCATCTTGGCCGCCTTCCTCAGCCCCGAACATAAGATTTTGACGCTGTTGGCGGCAATCCTGATGCT GGAAGTCGGTGAGCGCCTCTACGACTTTGCCCCCCTCTTTGCCCCGCTCACCCCTGGCAACGGCACCCGTCTGGCAGGCC TAGCCATAGCTGCCTTTGGGTTTTGGGGATCCAACCTATTCTTGCAGATCCCCATTGCAACGATACGGGTACTCCTCCTC AGCGAGCCGGAGCTGGCCCAAATGGATCCCGTCCCCGTCGAGGAGATTGAAAGCCGCTTCTCCGTCATCGGCAATCGCCG CAGCCCACTCCTGCAACGGCTGTTGCGCCGCATCTCCGGCCAAGATTCAGAAGGCACCTCGAAAGACCAAAAAGACAAGG TTAAAAACAGAGCGACAGAAAACCCCCAGCCGGAATCCGAGAAGCGGGATCCCTCTGGGGAAGTTGCCATGCCGGCCCCT GAAACTCCCCCCGATCCCACCTAA
Upstream 100 bases:
>100_bases AACTGGGACAAATTAGTCACCTTCCGCCTCACAGAATTGGAAGTGGTGGACAAATCCCGCCCCTAGCCCTGCTCTCCCCT GTCCCTTTTGGCATCTCCCC
Downstream 100 bases:
>100_bases GGCAAGCTTCCGCAAAAGCTGTAGCTCAATGTTAGATTGGAAGCAATCCAAGTAGATTGGAAGCAATCCAAGCCCTGTGA AATCCAACCATCGGCATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRSHWQEPFLWIHAAGILLFPLWVGLTLIGLATGDPLLPVGAEQAWVAVVGIGPVFAMQWRKPFDIFSVWVASVPPEELT LEQRRILAAFLSPEHKILTLLAAILMLEVGERLYDFAPLFAPLTPGNGTRLAGLAIAAFGFWGSNLFLQIPIATIRVLLL SEPELAQMDPVPVEEIESRFSVIGNRRSPLLQRLLRRISGQDSEGTSKDQKDKVKNRATENPQPESEKRDPSGEVAMPAP ETPPDPT
Sequences:
>Translated_247_residues MRSHWQEPFLWIHAAGILLFPLWVGLTLIGLATGDPLLPVGAEQAWVAVVGIGPVFAMQWRKPFDIFSVWVASVPPEELT LEQRRILAAFLSPEHKILTLLAAILMLEVGERLYDFAPLFAPLTPGNGTRLAGLAIAAFGFWGSNLFLQIPIATIRVLLL SEPELAQMDPVPVEEIESRFSVIGNRRSPLLQRLLRRISGQDSEGTSKDQKDKVKNRATENPQPESEKRDPSGEVAMPAP ETPPDPT >Mature_247_residues MRSHWQEPFLWIHAAGILLFPLWVGLTLIGLATGDPLLPVGAEQAWVAVVGIGPVFAMQWRKPFDIFSVWVASVPPEELT LEQRRILAAFLSPEHKILTLLAAILMLEVGERLYDFAPLFAPLTPGNGTRLAGLAIAAFGFWGSNLFLQIPIATIRVLLL SEPELAQMDPVPVEEIESRFSVIGNRRSPLLQRLLRRISGQDSEGTSKDQKDKVKNRATENPQPESEKRDPSGEVAMPAP ETPPDPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27281; Mature: 27281
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHWQEPFLWIHAAGILLFPLWVGLTLIGLATGDPLLPVGAEQAWVAVVGIGPVFAMQW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHC RKPFDIFSVWVASVPPEELTLEQRRILAAFLSPEHKILTLLAAILMLEVGERLYDFAPLF CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APLTPGNGTRLAGLAIAAFGFWGSNLFLQIPIATIRVLLLSEPELAQMDPVPVEEIESRF CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHCCCCCCHHHHHHHH SVIGNRRSPLLQRLLRRISGQDSEGTSKDQKDKVKNRATENPQPESEKRDPSGEVAMPAP HHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC ETPPDPT CCCCCCC >Mature Secondary Structure MRSHWQEPFLWIHAAGILLFPLWVGLTLIGLATGDPLLPVGAEQAWVAVVGIGPVFAMQW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHC RKPFDIFSVWVASVPPEELTLEQRRILAAFLSPEHKILTLLAAILMLEVGERLYDFAPLF CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APLTPGNGTRLAGLAIAAFGFWGSNLFLQIPIATIRVLLLSEPELAQMDPVPVEEIESRF CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHCCCCCCHHHHHHHH SVIGNRRSPLLQRLLRRISGQDSEGTSKDQKDKVKNRATENPQPESEKRDPSGEVAMPAP HHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC ETPPDPT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA