| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608083
Identifier: 86608083
GI number: 86608083
Start: 598053
End: 598493
Strand: Reverse
Name: 86608083
Synonym: CYB_0592
Alternate gene names: NA
Gene position: 598493-598053 (Counterclockwise)
Preceding gene: 86608084
Following gene: 86608082
Centisome position: 19.64
GC content: 53.29
Gene sequence:
>441_bases ATGACCTTCGCCACCAGCGAGATCACATCGGAACAAGAGCTCAAGATCCAACGGCAAATCCGGCTGGCCGAAGATGATCT GGTCGCCAGAATTCAAGCCGCCTTGGATAACTTCAGAGGTCTCAACAGATTGGAAGAGGCCCAATATCGCAACCTATTGC ACGTGGCAGCTTCCACCGAAAGCTCAGAGGTGATCAAGAACTTTTTGCGCTACCAGGTGGGGCGCGGTGACAAGTGGGGG CGGGGCAAAGACTCTTTGGCAGAAGCCATCATCAAAGACATCGACAACTGGATTCATCAAAGGGCTATAGCCATCGCCAG GGAAGCCGGAATTGAAAGAGCATCCCCCAAAGTCAACGAGATCAAAATTGACTTGATTCGGCGCTACCTGGGCTATGGGG CCCGCTACCTCAAGTACAAGCGAGAGGGAGGAGGATCCTAG
Upstream 100 bases:
>100_bases CGGAGATGGAATACTGGGGGATTGGCGAACGCACTGCTGAAGGATTCGGCCAAATCGAAGTTTGCAGTCCGTTCCATCAT CATTTCTGGGAGAACCCGCT
Downstream 100 bases:
>100_bases ACCGTGACCTACAGCAGTTTTACCCTTGAGAGAGCCATTTCGACCTTTCAGCTCAGGTCAAGAATCATCCATGGCCTGTT TGCAGAGGTTCCACTGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTFATSEITSEQELKIQRQIRLAEDDLVARIQAALDNFRGLNRLEEAQYRNLLHVAASTESSEVIKNFLRYQVGRGDKWG RGKDSLAEAIIKDIDNWIHQRAIAIAREAGIERASPKVNEIKIDLIRRYLGYGARYLKYKREGGGS
Sequences:
>Translated_146_residues MTFATSEITSEQELKIQRQIRLAEDDLVARIQAALDNFRGLNRLEEAQYRNLLHVAASTESSEVIKNFLRYQVGRGDKWG RGKDSLAEAIIKDIDNWIHQRAIAIAREAGIERASPKVNEIKIDLIRRYLGYGARYLKYKREGGGS >Mature_145_residues TFATSEITSEQELKIQRQIRLAEDDLVARIQAALDNFRGLNRLEEAQYRNLLHVAASTESSEVIKNFLRYQVGRGDKWGR GKDSLAEAIIKDIDNWIHQRAIAIAREAGIERASPKVNEIKIDLIRRYLGYGARYLKYKREGGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16677; Mature: 16546
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFATSEITSEQELKIQRQIRLAEDDLVARIQAALDNFRGLNRLEEAQYRNLLHVAASTE CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC SSEVIKNFLRYQVGRGDKWGRGKDSLAEAIIKDIDNWIHQRAIAIAREAGIERASPKVNE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH IKIDLIRRYLGYGARYLKYKREGGGS HHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure TFATSEITSEQELKIQRQIRLAEDDLVARIQAALDNFRGLNRLEEAQYRNLLHVAASTE CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC SSEVIKNFLRYQVGRGDKWGRGKDSLAEAIIKDIDNWIHQRAIAIAREAGIERASPKVNE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH IKIDLIRRYLGYGARYLKYKREGGGS HHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA