| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608082
Identifier: 86608082
GI number: 86608082
Start: 597402
End: 598049
Strand: Reverse
Name: 86608082
Synonym: CYB_0591
Alternate gene names: NA
Gene position: 598049-597402 (Counterclockwise)
Preceding gene: 86608083
Following gene: 86608081
Centisome position: 19.63
GC content: 49.85
Gene sequence:
>648_bases GTGACCTACAGCAGTTTTACCCTTGAGAGAGCCATTTCGACCTTTCAGCTCAGGTCAAGAATCATCCATGGCCTGTTTGC AGAGGTTCCACTGACTGAGTGCTCCGATTACTTGAAAATAACCCTAGATCGCTATCTCGGCTTGGCCACCTCGGTCAACA GCGAAAAAGCCCGCTCCGAGTTTATCATCGCCCCTGTGCTGGGAGAGGTGAAGTACCTATGTCGGGATCAAATCTCGCTG TTTTCCGGCAAGGAATTCAACGTGGATCCCGAGAGGGGGTTGGTGGGCCTATGCGACTACATCATTTGCCTATCCCCTCT CCAACTCTACATTCAAGATCCGGTGGTGATTATCGTTGAGGCCAAAAAAGAAGACTTGATCGGGGGTCTGGGCCAGTGCG TTGCCGGTATGGTGGGGGCACAGGTCTTTAACAAGAACTCCAATTCTCAAGTAGACAGTGTCTATGGAGCAGTAACCTCA GGAACCAACTGGCGATTTGCAAAACTCGAGGGTGACCAACTCTTTATCGATGACAGGGAGTACTTTATCTCAGAAATTGC TCAGATCCTAGGGATCCTCTTGAGTTTTATTAAGGGCTCCGTCTCGCTTCGGGAATGGCAAACCTCTGCAGTACAAGCCT TAACTTGA
Upstream 100 bases:
>100_bases CCCCAAAGTCAACGAGATCAAAATTGACTTGATTCGGCGCTACCTGGGCTATGGGGCCCGCTACCTCAAGTACAAGCGAG AGGGAGGAGGATCCTAGACC
Downstream 100 bases:
>100_bases GCAGCCATTTGAGGGAACAATGTTCGACGTTTTCAAAAACCGCTTGGAAATCACCGGCACCCTCACCACCGTGACCGCTC TGCACATCGGGGTGGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTYSSFTLERAISTFQLRSRIIHGLFAEVPLTECSDYLKITLDRYLGLATSVNSEKARSEFIIAPVLGEVKYLCRDQISL FSGKEFNVDPERGLVGLCDYIICLSPLQLYIQDPVVIIVEAKKEDLIGGLGQCVAGMVGAQVFNKNSNSQVDSVYGAVTS GTNWRFAKLEGDQLFIDDREYFISEIAQILGILLSFIKGSVSLREWQTSAVQALT
Sequences:
>Translated_215_residues MTYSSFTLERAISTFQLRSRIIHGLFAEVPLTECSDYLKITLDRYLGLATSVNSEKARSEFIIAPVLGEVKYLCRDQISL FSGKEFNVDPERGLVGLCDYIICLSPLQLYIQDPVVIIVEAKKEDLIGGLGQCVAGMVGAQVFNKNSNSQVDSVYGAVTS GTNWRFAKLEGDQLFIDDREYFISEIAQILGILLSFIKGSVSLREWQTSAVQALT >Mature_214_residues TYSSFTLERAISTFQLRSRIIHGLFAEVPLTECSDYLKITLDRYLGLATSVNSEKARSEFIIAPVLGEVKYLCRDQISLF SGKEFNVDPERGLVGLCDYIICLSPLQLYIQDPVVIIVEAKKEDLIGGLGQCVAGMVGAQVFNKNSNSQVDSVYGAVTSG TNWRFAKLEGDQLFIDDREYFISEIAQILGILLSFIKGSVSLREWQTSAVQALT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23853; Mature: 23721
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSSFTLERAISTFQLRSRIIHGLFAEVPLTECSDYLKITLDRYLGLATSVNSEKARSE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC FIIAPVLGEVKYLCRDQISLFSGKEFNVDPERGLVGLCDYIICLSPLQLYIQDPVVIIVE EEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEE AKKEDLIGGLGQCVAGMVGAQVFNKNSNSQVDSVYGAVTSGTNWRFAKLEGDQLFIDDRE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCHH YFISEIAQILGILLSFIKGSVSLREWQTSAVQALT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TYSSFTLERAISTFQLRSRIIHGLFAEVPLTECSDYLKITLDRYLGLATSVNSEKARSE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC FIIAPVLGEVKYLCRDQISLFSGKEFNVDPERGLVGLCDYIICLSPLQLYIQDPVVIIVE EEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEE AKKEDLIGGLGQCVAGMVGAQVFNKNSNSQVDSVYGAVTSGTNWRFAKLEGDQLFIDDRE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCHH YFISEIAQILGILLSFIKGSVSLREWQTSAVQALT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA