Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608078

Identifier: 86608078

GI number: 86608078

Start: 593853

End: 594932

Strand: Reverse

Name: 86608078

Synonym: CYB_0587

Alternate gene names: NA

Gene position: 594932-593853 (Counterclockwise)

Preceding gene: 86608079

Following gene: 86608077

Centisome position: 19.53

GC content: 60.74

Gene sequence:

>1080_bases
ATGACCCCCCAAGGCCCTCGCCCATTGCCCAACCAGGCCGCATCTGCAAGATCGTCTGCCGGCAACAGCAGTCGAGGTGG
AGGTAACCCAACCGTGTCTCCCAAACCCTATGAGCTGATCCCGTTTCCCACCCAGCCCCCCAAGCTGGAGCGGCCCGCCG
GCCACGCCCAGTTCCATCCCGATAGGTTGCACGGCACCCTCTTCCTCACCCTAACGGTGCAGACTGCCGTCCACATCTCC
ACCGGCCACTTGGCCTTGGGCAGCGATGTCGGGGTGAAAGGGATCCCGGTGCTCAAAACCATGACCACCACTCCCAACGG
AAGGCTTAAAATCCAGGGCAGCTCCCTCAAGGGGGCCATCCGGGCCATGTACGAGGCGATCACCAACAGCACCCTTGCGG
TGATGACGAGCCGGTACCGAAATCGGATCCCCCCAGAGCGGCACCCCTGCCGCAACAAAGAGCAGCTTTGTCCGGCCAGC
CGCGTTTTCGGTGCCCTGAACTGGCAGGGATTGGTGGAGTTCAGGGATGCCATTGCCACCAGTGCCGGATCCGGCGGCGG
ATCCCTGCCCCCCCTGTACCGTCCACGCCCGGATCAGTGCAAAGCTTATTTTCAGAAGGAAAACGGCAGAGTCATCGGGC
GCAAGTTCTACTACACCCACAGAAACGCGTTGCAGGACAGTTCAAGGGGAACGCCCACCCAGCAAGCGATACAAAACACA
GTTTTCAAAACCCAAATCCATTTCAAAAACCTCACCCCTGCTGAGCTGGGCACCTTGCTCACGGTCTTGGGGCAGGATCC
CAAGCATTCCATGCTGCTGAAGGTGGGGGGCGGCAAGCCCGTGGGCCTGGGATCCCTGCAGGTGACCCTCGACAAGATCG
AGCGGCCCGGCAACCTAAAAGATCGCTACAGCCGCTACGATCCCCCAGAAGCCGATACCCTGGAAGGAAAACGCCTCCAA
GCCTTTGTGCAAGAGCAAATTGGAGCTGCCCAGGGCTACATCTTGCCCGAACAACTCAAGCGATTGGCCGCCATCCTGAG
TCCCACTGCTCTGCGCGAGCCACCCACCGGAGTGTACTGA

Upstream 100 bases:

>100_bases
AGCCCCTCAGCCATCCCCAAGATCTCAAGGTGGGCCAGCGCTACTTCCGAGATGAGCGAACTGCCCGCGTTCACTTTATT
GCCCTGATTCCGAGGTGACC

Downstream 100 bases:

>100_bases
GGGTTCCCCCATGCTGTCAGACACTGTCGATCTCAGCCCCCAATCTTGGGATCTCGCCCACGGCATCGCCATGACCTTGG
CCAAAGAAAGGGTGGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MTPQGPRPLPNQAASARSSAGNSSRGGGNPTVSPKPYELIPFPTQPPKLERPAGHAQFHPDRLHGTLFLTLTVQTAVHIS
TGHLALGSDVGVKGIPVLKTMTTTPNGRLKIQGSSLKGAIRAMYEAITNSTLAVMTSRYRNRIPPERHPCRNKEQLCPAS
RVFGALNWQGLVEFRDAIATSAGSGGGSLPPLYRPRPDQCKAYFQKENGRVIGRKFYYTHRNALQDSSRGTPTQQAIQNT
VFKTQIHFKNLTPAELGTLLTVLGQDPKHSMLLKVGGGKPVGLGSLQVTLDKIERPGNLKDRYSRYDPPEADTLEGKRLQ
AFVQEQIGAAQGYILPEQLKRLAAILSPTALREPPTGVY

Sequences:

>Translated_359_residues
MTPQGPRPLPNQAASARSSAGNSSRGGGNPTVSPKPYELIPFPTQPPKLERPAGHAQFHPDRLHGTLFLTLTVQTAVHIS
TGHLALGSDVGVKGIPVLKTMTTTPNGRLKIQGSSLKGAIRAMYEAITNSTLAVMTSRYRNRIPPERHPCRNKEQLCPAS
RVFGALNWQGLVEFRDAIATSAGSGGGSLPPLYRPRPDQCKAYFQKENGRVIGRKFYYTHRNALQDSSRGTPTQQAIQNT
VFKTQIHFKNLTPAELGTLLTVLGQDPKHSMLLKVGGGKPVGLGSLQVTLDKIERPGNLKDRYSRYDPPEADTLEGKRLQ
AFVQEQIGAAQGYILPEQLKRLAAILSPTALREPPTGVY
>Mature_358_residues
TPQGPRPLPNQAASARSSAGNSSRGGGNPTVSPKPYELIPFPTQPPKLERPAGHAQFHPDRLHGTLFLTLTVQTAVHIST
GHLALGSDVGVKGIPVLKTMTTTPNGRLKIQGSSLKGAIRAMYEAITNSTLAVMTSRYRNRIPPERHPCRNKEQLCPASR
VFGALNWQGLVEFRDAIATSAGSGGGSLPPLYRPRPDQCKAYFQKENGRVIGRKFYYTHRNALQDSSRGTPTQQAIQNTV
FKTQIHFKNLTPAELGTLLTVLGQDPKHSMLLKVGGGKPVGLGSLQVTLDKIERPGNLKDRYSRYDPPEADTLEGKRLQA
FVQEQIGAAQGYILPEQLKRLAAILSPTALREPPTGVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39033; Mature: 38902

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS00074 GLFV_DEHYDROGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQGPRPLPNQAASARSSAGNSSRGGGNPTVSPKPYELIPFPTQPPKLERPAGHAQFHP
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
DRLHGTLFLTLTVQTAVHISTGHLALGSDVGVKGIPVLKTMTTTPNGRLKIQGSSLKGAI
CCCCEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHH
RAMYEAITNSTLAVMTSRYRNRIPPERHPCRNKEQLCPASRVFGALNWQGLVEFRDAIAT
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHH
SAGSGGGSLPPLYRPRPDQCKAYFQKENGRVIGRKFYYTHRNALQDSSRGTPTQQAIQNT
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEHHHHHCCCCCCCCHHHHHHHH
VFKTQIHFKNLTPAELGTLLTVLGQDPKHSMLLKVGGGKPVGLGSLQVTLDKIERPGNLK
HHHEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEHHHHCCCCCCH
DRYSRYDPPEADTLEGKRLQAFVQEQIGAAQGYILPEQLKRLAAILSPTALREPPTGVY
HHHHCCCCCCCCCCCHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure 
TPQGPRPLPNQAASARSSAGNSSRGGGNPTVSPKPYELIPFPTQPPKLERPAGHAQFHP
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
DRLHGTLFLTLTVQTAVHISTGHLALGSDVGVKGIPVLKTMTTTPNGRLKIQGSSLKGAI
CCCCEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHH
RAMYEAITNSTLAVMTSRYRNRIPPERHPCRNKEQLCPASRVFGALNWQGLVEFRDAIAT
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHH
SAGSGGGSLPPLYRPRPDQCKAYFQKENGRVIGRKFYYTHRNALQDSSRGTPTQQAIQNT
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEHHHHHCCCCCCCCHHHHHHHH
VFKTQIHFKNLTPAELGTLLTVLGQDPKHSMLLKVGGGKPVGLGSLQVTLDKIERPGNLK
HHHEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEHHHHCCCCCCH
DRYSRYDPPEADTLEGKRLQAFVQEQIGAAQGYILPEQLKRLAAILSPTALREPPTGVY
HHHHCCCCCCCCCCCHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA