Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607967

Identifier: 86607967

GI number: 86607967

Start: 482827

End: 483726

Strand: Direct

Name: 86607967

Synonym: CYB_0473

Alternate gene names: NA

Gene position: 482827-483726 (Clockwise)

Preceding gene: 86607966

Following gene: 86607968

Centisome position: 15.85

GC content: 50.44

Gene sequence:

>900_bases
TTGGCCGACTCAGCCCTATACTTGGTCAACCATTGCCGCTACGGAGCCATAGCCCAAGCCAACCTAGATTTGATGGGGAT
AGATCCCAGTTTTCATCTGCAGAAGGTTTTGCCCAATCTAGGCCAAGGGATCCATCTCCTCACTTGGGATCCCCAGCACA
AAGGGTTAACCGAGCAGGATCTCGCTCACATCCAAGCAATTGGCCCTGGATCACTGCTGGCAGCTAACCCGGTATTCCTG
ACTTTTACCCAGCCGGATCCCTCAGAACCCAACCGGTTTTACCCCTGTAAATACATCAAGCTGGATAACTTCCTGCCTCA
AGAGCTCAACCAAGCCATTCTCCAACATGCCATTACCCACCAAGACAAGTTTATCCCTTCCAAGAGCTACAGCAAGAGCA
ACACCGAGGCAGAGTCACTAAAATTTCGCCGCTCCCTGAGGCTGGACTTCGCTTACTTTCAGGAGCATGGATCCCTGCTG
CGAGAAAAAATTGCGGCTGTTGCTCCCCAAATCTTCGCCGAGCTAGGCATTGAGAACTTTGACATTCAAATCTTTGAGAT
GGAGATGATTGCCAGCCATGATGGCTGCTTCTTTACCGCCCACACCGATAACTCCTACCCACAAACTGCCTTCCGCCAGG
TGAGCTGCGTATATTACTTTCACAAAGAGCCAAAGCCTTATCGAGGAGGTGAGCTGCGCATCTACGATACCCAAAGGCAA
AAACCTCATCCACCAATCCTGCACGGGGCATACGATGAGGTAACTCCTACAAATAACAGCATCGTCTTCTTCTCCAGCAG
TTGCCTACATGAAATCCTGCCGGTATTTAGCCCTAGCCAAGCCTTTGCCGATAGCCGCTTCACTATCAATACTTGGCTAG
GAGCCAAGCAATTCACCTAA

Upstream 100 bases:

>100_bases
CTCTGGTAGAGCAGGGCAGGCTCAGGGCTACTGAAAGCCCGCTCCGTACCGCTTTAGCGGTCGGAGTCGGGTAGTTTACT
CTTTGCTACTGCGGGATTAC

Downstream 100 bases:

>100_bases
AGGCTTGCAGCTCCACCATGGCCAGAGTTTGCATAATTACCACTGTTCGGGATCCAGGCGTGTGCTTGGAGTCGTTCATT
CGCTATCACCTTGCCCTTGG

Product: 2OG-Fe(II) oxygenase family oxidoreductase

Products: NA

Alternate protein names: ORF60-3 [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFL
TFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLL
REKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ
KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT

Sequences:

>Translated_299_residues
MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFL
TFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLL
REKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ
KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT
>Mature_298_residues
ADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQDLAHIQAIGPGSLLAANPVFLT
FTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITHQDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLR
EKIAAVAPQIFAELGIENFDIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQK
PHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT

Specific function: Unknown

COG id: COG3751

COG function: function code O; Predicted proline hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006620 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33967; Mature: 33836

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQD
CCCCCEEHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
LAHIQAIGPGSLLAANPVFLTFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITH
HHHEEECCCCCEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
QDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLREKIAAVAPQIFAELGIENF
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ
CEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCC
KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT
CCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ADSALYLVNHCRYGAIAQANLDLMGIDPSFHLQKVLPNLGQGIHLLTWDPQHKGLTEQD
CCCCEEHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
LAHIQAIGPGSLLAANPVFLTFTQPDPSEPNRFYPCKYIKLDNFLPQELNQAILQHAITH
HHHEEECCCCCEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
QDKFIPSKSYSKSNTEAESLKFRRSLRLDFAYFQEHGSLLREKIAAVAPQIFAELGIENF
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DIQIFEMEMIASHDGCFFTAHTDNSYPQTAFRQVSCVYYFHKEPKPYRGGELRIYDTQRQ
CEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCEEEEEECCCC
KPHPPILHGAYDEVTPTNNSIVFFSSSCLHEILPVFSPSQAFADSRFTINTWLGAKQFT
CCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 1670771 [H]