The gene/protein map for NC_007776 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607869

Identifier: 86607869

GI number: 86607869

Start: 385745

End: 388288

Strand: Reverse

Name: 86607869

Synonym: CYB_0372

Alternate gene names: NA

Gene position: 388288-385745 (Counterclockwise)

Preceding gene: 86607870

Following gene: 86607868

Centisome position: 12.74

GC content: 60.38

Gene sequence:

>2544_bases
ATGCAGAGGTTGCGGCGAGGATTGTTTCTGCTGCTGGGGGTGGGGCTGGGGATCCTGGCCATCACGGGCTTGGCGGCTTT
CTACGTAGATCTGGCTTGGTTTGCCGAGCTGCATGCTCTGCCGGTACTGTGGACGCGGGTAATTGCCCGCTGGGGGCTGG
GCCTGGGCGCTTTCCTCTTTGCCCTGGCGGTGACGGGATCCAACATCTGCTCCTGCTGGCGGGGGGCAACCTTGGCTGGG
GCCTGGGCGATTGCCACAGGTTTGAGTGTTTTCTTTGCTGGGTCTCTTTCCAATCACTGGTTCACGCTGTTGCTCTGGCT
GAACCAGGGGCCCGTCGGGGAGTCGGATCCCATTTTCAACCGCGATCTCGGCTTTTTTCTCTTCAGCCTGCCTTTCTGGG
AGACGCTGCAGCATTGGTGCTTCAACCTGGTGCTGCTCACCTTGATTGCCGTTGTCCTCATCTACTTGGTAGAGCTGGGG
CTTTCCGAGCAACGGCTGACCTTGGCCCTTTCTCTCTATGCCCAGCGGCACTTGCTGATCCTGGGGGGATCCCTGTTTCT
CATTCGCGCCTGGGGCCATTGGCTGGAGCGCTACGAGCTGCTCTATTCCACCCGCGGCGTTGTGTTTGGGGCCGGTTTTG
CCGATGTGCATGCAACCTTGCCGGCCACGACCTTGATGAGCGGGGTGGCAGGCCTGACGGCGGTGGGATTCTGGGCTTTG
GCTCGCCAGGGGATCCGCCTCAACCTTCCTTTCCTCAAGTCCTGGTGCCCTTCCTGGGCCAGCTCTCTCCTGGCGCCGGC
CATCCTCTGGGGGGCCTACCTGGGGTTTGGGCTGCTAACCACCCAACTTTATCCCCAACTGGTGCAAACTTTCTTGGTCA
CCCCCAACGAGCTGGAGCTGGAGCGCCCCTACATCGAGGACAACATCCGTTTTACCCGTGCTGGCTTTGGCCTGGCCGAT
GTCGAAGTCCAACCCTTCCCGGAAGGGGGAGCCCTCACCTGGGAGATCCTGCAGCAGAATCAATCCACCCTGAGCAACGT
GCGCCTCTGGGATGCGGATCCCCTATTGGCCACCTACCGCCAACTGCAAGAAATCCGCCCCTACTACCAATTTCCCTATG
TGAATGTGGATCGCTACCGCATTGGGGGAGAATTGCGCCAAGTTATGCATGCCGCCCGCGAGCTGGACTTTGCCCAGGTA
CCCCCCGCCGCCCAAACCTGGGTTAACCGGCGGTTTTTCTACACCCACGGCTATGGCCTCACCCTCAGCCCGGTGAATGT
GGTGACCCCTGAAGGCCTGCCGGATTTTTTCCTATCGGATATCCCGCCGCGGGTTTCTCCCCGCTACCCTGAGGTGGCCT
CCGTCTTGCGGGTGGAGCAGCCGGCCCTCTACTATGGCGAGCTGACCACCACCGATGTTTTCGTGGGCGCTGAGGCGCGG
GAGTTGGACTACCCTGCAGCAGAGCGCTATGTGTACAGCAGCTACCGGGGCAGCGGTGGCGTGCCCATTCCCCACCTCTG
GCAGCGGTTTCTCTACGCCTGGCATTTTGGCGATCTGCGCATCCTTCTCAGCCGCGAGCTATCTTCTGCCACCCGCTTTC
TCTATCGCCGCCAAATCCGCGAGCGCATCCGTCGGGTGATGCCCTTTTTGCTCTACGACCGGGATCCCTACCTGGTCATT
CAAGGCGGCAAGCTCTACTGGTTTTTCGATGCCTATACCACCAGCAGCCGCTACCCCTACTCGGAGCACCTGCCCGGCTT
TCCCTTCAACTACATCCGCAACTCGGTCAAGGCGGTGATGGACGCCTACAACGGCAGCATCGATTGGTACATTGCCGACC
CTCGGGATCCCCTCATCCAAGCCTACGCCCGCATCTACCCCACCCTCTTCAAGCCTCTGGAGGCAATGCCGGAGCCGCTG
CGGCAACACATCCGCTATCCCCAAGACCTCTTCCGCCTGCAAGCGCAGCAGTTTGCCACCTACCACATGACGGATCCCCG
CCTCTTCTACAACCGCGAGGATCAATGGCAGATCCCCGGCCAGTTCCGCAATCGACGGCGCATTCCCATGCAGCCGCAGT
ATCTCATTCTCACCTTGCCGAGGGATCCCCAAGGGGTTGCAAACCACACTCCTGAGTTCGTCCTCCTCTCCCCCTATGCC
CCTGTTAACAAGCAGAACATGGTGGCTTGGATAGCGGCCCGCTGCGACGGGGAAAACTACGGCAAGCTCCTGGTGTACGA
GTTTTCCAAGCAACGGCTCATCTATGGCCCGGAACAGGTGGAAGCACGGGTCAATCAGGATCCCTTAATCTCCGAGCAAA
TTTCCCTCTGGAACCAGCATGGGTCGCGGGTGAACCTGGGCACGCTGCTGGTCATTCCTATCGAGACTTCTTTGCTCTAT
GTTCAGCCCCTTTACATCGAAGCAGAACAGGGCCGCTTGCCTCAGCTCACCCGGGTGATCGCTGCCTACGAAGACCGGGT
GGTGATGGAACCGACTCTCGGCCAGGCCTTAGAAGCCCTCTTTCTGCCGAGGGGCAGCCGATAG

Upstream 100 bases:

>100_bases
TATGCCTACGGCACCCTGTGTTGTTCCGCAACGCTCGGGCGAAGGGAAACTGCACCGCTGACGCGACCAAGAACAGCTTT
GAGCCGAGGATCCTGAGGCG

Downstream 100 bases:

>100_bases
AGAAAGGGATCCCCTCCTCATTTTTGAGGCAGGTAGTTGACGAAACTTAACGGATGTTTTAAGTTTAGGTTGTCAATCTT
CGCGCTTCCTTAGGGAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 847; Mature: 847

Protein sequence:

>847_residues
MQRLRRGLFLLLGVGLGILAITGLAAFYVDLAWFAELHALPVLWTRVIARWGLGLGAFLFALAVTGSNICSCWRGATLAG
AWAIATGLSVFFAGSLSNHWFTLLLWLNQGPVGESDPIFNRDLGFFLFSLPFWETLQHWCFNLVLLTLIAVVLIYLVELG
LSEQRLTLALSLYAQRHLLILGGSLFLIRAWGHWLERYELLYSTRGVVFGAGFADVHATLPATTLMSGVAGLTAVGFWAL
ARQGIRLNLPFLKSWCPSWASSLLAPAILWGAYLGFGLLTTQLYPQLVQTFLVTPNELELERPYIEDNIRFTRAGFGLAD
VEVQPFPEGGALTWEILQQNQSTLSNVRLWDADPLLATYRQLQEIRPYYQFPYVNVDRYRIGGELRQVMHAARELDFAQV
PPAAQTWVNRRFFYTHGYGLTLSPVNVVTPEGLPDFFLSDIPPRVSPRYPEVASVLRVEQPALYYGELTTTDVFVGAEAR
ELDYPAAERYVYSSYRGSGGVPIPHLWQRFLYAWHFGDLRILLSRELSSATRFLYRRQIRERIRRVMPFLLYDRDPYLVI
QGGKLYWFFDAYTTSSRYPYSEHLPGFPFNYIRNSVKAVMDAYNGSIDWYIADPRDPLIQAYARIYPTLFKPLEAMPEPL
RQHIRYPQDLFRLQAQQFATYHMTDPRLFYNREDQWQIPGQFRNRRRIPMQPQYLILTLPRDPQGVANHTPEFVLLSPYA
PVNKQNMVAWIAARCDGENYGKLLVYEFSKQRLIYGPEQVEARVNQDPLISEQISLWNQHGSRVNLGTLLVIPIETSLLY
VQPLYIEAEQGRLPQLTRVIAAYEDRVVMEPTLGQALEALFLPRGSR

Sequences:

>Translated_847_residues
MQRLRRGLFLLLGVGLGILAITGLAAFYVDLAWFAELHALPVLWTRVIARWGLGLGAFLFALAVTGSNICSCWRGATLAG
AWAIATGLSVFFAGSLSNHWFTLLLWLNQGPVGESDPIFNRDLGFFLFSLPFWETLQHWCFNLVLLTLIAVVLIYLVELG
LSEQRLTLALSLYAQRHLLILGGSLFLIRAWGHWLERYELLYSTRGVVFGAGFADVHATLPATTLMSGVAGLTAVGFWAL
ARQGIRLNLPFLKSWCPSWASSLLAPAILWGAYLGFGLLTTQLYPQLVQTFLVTPNELELERPYIEDNIRFTRAGFGLAD
VEVQPFPEGGALTWEILQQNQSTLSNVRLWDADPLLATYRQLQEIRPYYQFPYVNVDRYRIGGELRQVMHAARELDFAQV
PPAAQTWVNRRFFYTHGYGLTLSPVNVVTPEGLPDFFLSDIPPRVSPRYPEVASVLRVEQPALYYGELTTTDVFVGAEAR
ELDYPAAERYVYSSYRGSGGVPIPHLWQRFLYAWHFGDLRILLSRELSSATRFLYRRQIRERIRRVMPFLLYDRDPYLVI
QGGKLYWFFDAYTTSSRYPYSEHLPGFPFNYIRNSVKAVMDAYNGSIDWYIADPRDPLIQAYARIYPTLFKPLEAMPEPL
RQHIRYPQDLFRLQAQQFATYHMTDPRLFYNREDQWQIPGQFRNRRRIPMQPQYLILTLPRDPQGVANHTPEFVLLSPYA
PVNKQNMVAWIAARCDGENYGKLLVYEFSKQRLIYGPEQVEARVNQDPLISEQISLWNQHGSRVNLGTLLVIPIETSLLY
VQPLYIEAEQGRLPQLTRVIAAYEDRVVMEPTLGQALEALFLPRGSR
>Mature_847_residues
MQRLRRGLFLLLGVGLGILAITGLAAFYVDLAWFAELHALPVLWTRVIARWGLGLGAFLFALAVTGSNICSCWRGATLAG
AWAIATGLSVFFAGSLSNHWFTLLLWLNQGPVGESDPIFNRDLGFFLFSLPFWETLQHWCFNLVLLTLIAVVLIYLVELG
LSEQRLTLALSLYAQRHLLILGGSLFLIRAWGHWLERYELLYSTRGVVFGAGFADVHATLPATTLMSGVAGLTAVGFWAL
ARQGIRLNLPFLKSWCPSWASSLLAPAILWGAYLGFGLLTTQLYPQLVQTFLVTPNELELERPYIEDNIRFTRAGFGLAD
VEVQPFPEGGALTWEILQQNQSTLSNVRLWDADPLLATYRQLQEIRPYYQFPYVNVDRYRIGGELRQVMHAARELDFAQV
PPAAQTWVNRRFFYTHGYGLTLSPVNVVTPEGLPDFFLSDIPPRVSPRYPEVASVLRVEQPALYYGELTTTDVFVGAEAR
ELDYPAAERYVYSSYRGSGGVPIPHLWQRFLYAWHFGDLRILLSRELSSATRFLYRRQIRERIRRVMPFLLYDRDPYLVI
QGGKLYWFFDAYTTSSRYPYSEHLPGFPFNYIRNSVKAVMDAYNGSIDWYIADPRDPLIQAYARIYPTLFKPLEAMPEPL
RQHIRYPQDLFRLQAQQFATYHMTDPRLFYNREDQWQIPGQFRNRRRIPMQPQYLILTLPRDPQGVANHTPEFVLLSPYA
PVNKQNMVAWIAARCDGENYGKLLVYEFSKQRLIYGPEQVEARVNQDPLISEQISLWNQHGSRVNLGTLLVIPIETSLLY
VQPLYIEAEQGRLPQLTRVIAAYEDRVVMEPTLGQALEALFLPRGSR

Specific function: Unknown

COG id: COG1615

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0182 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y372_SYNJB (Q2JPC2)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_476631.1
- STRING:   Q2JPC2
- GeneID:   3901773
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0372
- TIGR:   CYB_0372
- eggNOG:   COG1615
- HOGENOM:   HBG538831
- OMA:   NQTDWIN
- ProtClustDB:   CLSK750506
- BioCyc:   SSP321332:CYB_0372-MONOMER
- HAMAP:   MF_01600
- InterPro:   IPR005372

Pfam domain/function: PF03699 UPF0182

EC number: NA

Molecular weight: Translated: 96984; Mature: 96984

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1157f908)-; HASH(0x1171a334)-; HASH(0x11d3a87c)-; HASH(0x11d808f0)-; HASH(0x11d85144)-; HASH(0x11b5cb84)-; HASH(0x11fe36a8)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLRRGLFLLLGVGLGILAITGLAAFYVDLAWFAELHALPVLWTRVIARWGLGLGAFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALAVTGSNICSCWRGATLAGAWAIATGLSVFFAGSLSNHWFTLLLWLNQGPVGESDPIFN
HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCCCCC
RDLGFFLFSLPFWETLQHWCFNLVLLTLIAVVLIYLVELGLSEQRLTLALSLYAQRHLLI
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEE
LGGSLFLIRAWGHWLERYELLYSTRGVVFGAGFADVHATLPATTLMSGVAGLTAVGFWAL
ECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ARQGIRLNLPFLKSWCPSWASSLLAPAILWGAYLGFGLLTTQLYPQLVQTFLVTPNELEL
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ERPYIEDNIRFTRAGFGLADVEVQPFPEGGALTWEILQQNQSTLSNVRLWDADPLLATYR
CCCCCCCCCEEEECCCCEEECEEEECCCCCCEEHHHHHCCHHHHHCEEEECCCHHHHHHH
QLQEIRPYYQFPYVNVDRYRIGGELRQVMHAARELDFAQVPPAAQTWVNRRFFYTHGYGL
HHHHCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCE
TLSPVNVVTPEGLPDFFLSDIPPRVSPRYPEVASVLRVEQPALYYGELTTTDVFVGAEAR
EECCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCHH
ELDYPAAERYVYSSYRGSGGVPIPHLWQRFLYAWHFGDLRILLSRELSSATRFLYRRQIR
HCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHH
ERIRRVMPFLLYDRDPYLVIQGGKLYWFFDAYTTSSRYPYSEHLPGFPFNYIRNSVKAVM
HHHHHHHHHHEECCCCEEEEECCEEEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHH
DAYNGSIDWYIADPRDPLIQAYARIYPTLFKPLEAMPEPLRQHIRYPQDLFRLQAQQFAT
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHE
YHMTDPRLFYNREDQWQIPGQFRNRRRIPMQPQYLILTLPRDPQGVANHTPEFVLLSPYA
EECCCCEEEECCCCCEECCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCC
PVNKQNMVAWIAARCDGENYGKLLVYEFSKQRLIYGPEQVEARVNQDPLISEQISLWNQH
CCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEECHHHHHHHCCCCCCHHHHHHHHHCC
GSRVNLGTLLVIPIETSLLYVQPLYIEAEQGRLPQLTRVIAAYEDRVVMEPTLGQALEAL
CCEEECCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHH
FLPRGSR
HCCCCCH
>Mature Secondary Structure
MQRLRRGLFLLLGVGLGILAITGLAAFYVDLAWFAELHALPVLWTRVIARWGLGLGAFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALAVTGSNICSCWRGATLAGAWAIATGLSVFFAGSLSNHWFTLLLWLNQGPVGESDPIFN
HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCCCCC
RDLGFFLFSLPFWETLQHWCFNLVLLTLIAVVLIYLVELGLSEQRLTLALSLYAQRHLLI
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEE
LGGSLFLIRAWGHWLERYELLYSTRGVVFGAGFADVHATLPATTLMSGVAGLTAVGFWAL
ECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ARQGIRLNLPFLKSWCPSWASSLLAPAILWGAYLGFGLLTTQLYPQLVQTFLVTPNELEL
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ERPYIEDNIRFTRAGFGLADVEVQPFPEGGALTWEILQQNQSTLSNVRLWDADPLLATYR
CCCCCCCCCEEEECCCCEEECEEEECCCCCCEEHHHHHCCHHHHHCEEEECCCHHHHHHH
QLQEIRPYYQFPYVNVDRYRIGGELRQVMHAARELDFAQVPPAAQTWVNRRFFYTHGYGL
HHHHCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCE
TLSPVNVVTPEGLPDFFLSDIPPRVSPRYPEVASVLRVEQPALYYGELTTTDVFVGAEAR
EECCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCHH
ELDYPAAERYVYSSYRGSGGVPIPHLWQRFLYAWHFGDLRILLSRELSSATRFLYRRQIR
HCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHH
ERIRRVMPFLLYDRDPYLVIQGGKLYWFFDAYTTSSRYPYSEHLPGFPFNYIRNSVKAVM
HHHHHHHHHHEECCCCEEEEECCEEEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHH
DAYNGSIDWYIADPRDPLIQAYARIYPTLFKPLEAMPEPLRQHIRYPQDLFRLQAQQFAT
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHE
YHMTDPRLFYNREDQWQIPGQFRNRRRIPMQPQYLILTLPRDPQGVANHTPEFVLLSPYA
EECCCCEEEECCCCCEECCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCC
PVNKQNMVAWIAARCDGENYGKLLVYEFSKQRLIYGPEQVEARVNQDPLISEQISLWNQH
CCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEECHHHHHHHCCCCCCHHHHHHHHHCC
GSRVNLGTLLVIPIETSLLYVQPLYIEAEQGRLPQLTRVIAAYEDRVVMEPTLGQALEAL
CCEEECCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHH
FLPRGSR
HCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA